scholarly journals A Joint Model for Entity Analysis: Coreference, Typing, and Linking

2014 ◽  
Vol 2 ◽  
pp. 477-490 ◽  
Author(s):  
Greg Durrett ◽  
Dan Klein
Keyword(s):  
State Of The Art ◽  
Conditional Random Field ◽  
Named Entity Recognition ◽  
Joint Modeling ◽  
Joint Model ◽  
Entity Recognition ◽  
Coreference Resolution ◽  
Entity Linking ◽  
Semantic Type ◽  
Named Entity

We present a joint model of three core tasks in the entity analysis stack: coreference resolution (within-document clustering), named entity recognition (coarse semantic typing), and entity linking (matching to Wikipedia entities). Our model is formally a structured conditional random field. Unary factors encode local features from strong baselines for each task. We then add binary and ternary factors to capture cross-task interactions, such as the constraint that coreferent mentions have the same semantic type. On the ACE 2005 and OntoNotes datasets, we achieve state-of-the-art results for all three tasks. Moreover, joint modeling improves performance on each task over strong independent baselines.

Towards corpus and model: Hierarchical structured-attention-based features for Indonesian named entity recognition

2021 ◽  
pp. 1-12
Author(s):  
Yingwen Fu ◽  
Nankai Lin ◽  
Xiaotian Lin ◽  
Shengyi Jiang
Keyword(s):  
Language Processing ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Language Models ◽  
Neural Models ◽  
Performance Models ◽  
Named Entity ◽  
High Resource ◽  
Benchmark Datasets

Named entity recognition (NER) is fundamental to natural language processing (NLP). Most state-of-the-art researches on NER are based on pre-trained language models (PLMs) or classic neural models. However, these researches are mainly oriented to high-resource languages such as English. While for Indonesian, related resources (both in dataset and technology) are not yet well-developed. Besides, affix is an important word composition for Indonesian language, indicating the essentiality of character and token features for token-wise Indonesian NLP tasks. However, features extracted by currently top-performance models are insufficient. Aiming at Indonesian NER task, in this paper, we build an Indonesian NER dataset (IDNER) comprising over 50 thousand sentences (over 670 thousand tokens) to alleviate the shortage of labeled resources in Indonesian. Furthermore, we construct a hierarchical structured-attention-based model (HSA) for Indonesian NER to extract sequence features from different perspectives. Specifically, we use an enhanced convolutional structure as well as an enhanced attention structure to extract deeper features from characters and tokens. Experimental results show that HSA establishes competitive performance on IDNER and three benchmark datasets.

Named Entity Recognition and Relation Extraction

2021 ◽  
Vol 54 (1) ◽  
pp. 1-39
Author(s):  
Zara Nasar ◽  
Syed Waqar Jaffry ◽  
Muhammad Kamran Malik
Keyword(s):  
Deep Learning ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Relation Extraction ◽  
The State ◽  
Entity Recognition ◽  
Joint Models ◽  
Named Entity ◽  
Textual Data ◽  
Benchmark Datasets

With the advent of Web 2.0, there exist many online platforms that result in massive textual-data production. With ever-increasing textual data at hand, it is of immense importance to extract information nuggets from this data. One approach towards effective harnessing of this unstructured textual data could be its transformation into structured text. Hence, this study aims to present an overview of approaches that can be applied to extract key insights from textual data in a structured way. For this, Named Entity Recognition and Relation Extraction are being majorly addressed in this review study. The former deals with identification of named entities, and the latter deals with problem of extracting relation between set of entities. This study covers early approaches as well as the developments made up till now using machine learning models. Survey findings conclude that deep-learning-based hybrid and joint models are currently governing the state-of-the-art. It is also observed that annotated benchmark datasets for various textual-data generators such as Twitter and other social forums are not available. This scarcity of dataset has resulted into relatively less progress in these domains. Additionally, the majority of the state-of-the-art techniques are offline and computationally expensive. Last, with increasing focus on deep-learning frameworks, there is need to understand and explain the under-going processes in deep architectures.

scholarly journals Robust Multilingual Named Entity Recognition with Shallow Semi-supervised Features (Extended Abstract)

2017 ◽  
Author(s):  
Rodrigo Agerri ◽  
German Rigau
Keyword(s):  
Reproducibility Of Results ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Local Information ◽  
Entity Recognition ◽  
Shared Task ◽  
Competitive System ◽  
Named Entity ◽  
Text Understanding ◽  
Domain Models

We present a multilingual Named Entity Recognition approach based on a robust and general set of features across languages and datasets. Our system combines shallow local information with clustering semi-supervised features induced on large amounts of unlabeled text. Understanding via empiricalexperimentation how to effectively combine various types of clustering features allows us to seamlessly export our system to other datasets and languages. The result is a simple but highly competitive system which obtains state of the art results across five languages and twelve datasets. The results are reported on standard shared task evaluation data such as CoNLL for English, Spanish and Dutch. Furthermore, and despite the lack of linguistically motivated features, we also report best results for languages such as Basque and German. In addition, we demonstrate that our method also obtains very competitive results even when the amount of supervised data is cut by half, alleviating the dependency on manually annotated data. Finally, the results show that our emphasis on clustering features is crucial to develop robust out-of-domain models. The system and models are freely available to facilitate its use and guarantee the reproducibility of results.

scholarly journals BioALBERT: A Simple and Effective Pre-trained Language Model for Biomedical Named Entity Recognition

2020 ◽  
Author(s):  
Usman Naseem ◽  
Matloob Khushi ◽  
Vinay Reddy ◽  
Sakthivel Rajendran ◽  
Imran Razzak ◽  
...  
Keyword(s):  
State Of The Art ◽  
Language Model ◽  
Named Entity Recognition ◽  
Training Data ◽  
Entity Recognition ◽  
Future Research ◽  
Named Entity ◽  
Domain Specific ◽  
Context Dependent ◽  
Biomedical Named Entity Recognition

Abstract Background: In recent years, with the growing amount of biomedical documents, coupled with advancement in natural language processing algorithms, the research on biomedical named entity recognition (BioNER) has increased exponentially. However, BioNER research is challenging as NER in the biomedical domain are: (i) often restricted due to limited amount of training data, (ii) an entity can refer to multiple types and concepts depending on its context and, (iii) heavy reliance on acronyms that are sub-domain specific. Existing BioNER approaches often neglect these issues and directly adopt the state-of-the-art (SOTA) models trained in general corpora which often yields unsatisfactory results. Results: We propose biomedical ALBERT (A Lite Bidirectional Encoder Representations from Transformers for Biomedical Text Mining) - bioALBERT - an effective domain-specific pre-trained language model trained on huge biomedical corpus designed to capture biomedical context-dependent NER. We adopted self-supervised loss function used in ALBERT that targets on modelling inter-sentence coherence to better learn context-dependent representations and incorporated parameter reduction strategies to minimise memory usage and enhance the training time in BioNER. In our experiments, BioALBERT outperformed comparative SOTA BioNER models on eight biomedical NER benchmark datasets with four different entity types. The performance is increased for; (i) disease type corpora by 7.47% (NCBI-disease) and 10.63% (BC5CDR-disease); (ii) drug-chem type corpora by 4.61% (BC5CDR-Chem) and 3.89 (BC4CHEMD); (iii) gene-protein type corpora by 12.25% (BC2GM) and 6.42% (JNLPBA); and (iv) Species type corpora by 6.19% (LINNAEUS) and 23.71% (Species-800) is observed which leads to a state-of-the-art results. Conclusions: The performance of proposed model on four different biomedical entity types shows that our model is robust and generalizable in recognizing biomedical entities in text. We trained four different variants of BioALBERT models which are available for the research community to be used in future research.

scholarly journals Deep Learning-Based Named Entity Recognition and Knowledge Graph Construction for Geological Hazards

2019 ◽  
Vol 9 (1) ◽  
pp. 15 ◽  
Author(s):  
Runyu Fan ◽  
Lizhe Wang ◽  
Jining Yan ◽  
Weijing Song ◽  
Yingqian Zhu ◽  
...  
Keyword(s):  
Deep Learning ◽  
Large Scale ◽  
Conditional Random Field ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Knowledge Graph ◽  
Geological Hazard ◽  
Geological Hazards ◽  
Named Entity ◽  
Corpus Construction

Constructing a knowledge graph of geological hazards literature can facilitate the reuse of geological hazards literature and provide a reference for geological hazard governance. Named entity recognition (NER), as a core technology for constructing a geological hazard knowledge graph, has to face the challenges that named entities in geological hazard literature are diverse in form, ambiguous in semantics, and uncertain in context. This can introduce difficulties in designing practical features during the NER classification. To address the above problem, this paper proposes a deep learning-based NER model; namely, the deep, multi-branch BiGRU-CRF model, which combines a multi-branch bidirectional gated recurrent unit (BiGRU) layer and a conditional random field (CRF) model. In an end-to-end and supervised process, the proposed model automatically learns and transforms features by a multi-branch bidirectional GRU layer and enhances the output with a CRF layer. Besides the deep, multi-branch BiGRU-CRF model, we also proposed a pattern-based corpus construction method to construct the corpus needed for the deep, multi-branch BiGRU-CRF model. Experimental results indicated the proposed deep, multi-branch BiGRU-CRF model outperformed state-of-the-art models. The proposed deep, multi-branch BiGRU-CRF model constructed a large-scale geological hazard literature knowledge graph containing 34,457 entities nodes and 84,561 relations.

scholarly journals Recursively Binary Modification Model for Nested Named Entity Recognition

2020 ◽  
Vol 34 (05) ◽  
pp. 8164-8171
Author(s):  
Bing Li ◽  
Shifeng Liu ◽  
Yifang Sun ◽  
Wei Wang ◽  
Xiang Zhao
Keyword(s):  
Strong Evidence ◽  
State Of The Art ◽  
Named Entity Recognition ◽  
Bayesian Framework ◽  
Entity Recognition ◽  
Named Entities ◽  
Named Entity ◽  
Nested Structures ◽  
Benchmark Datasets ◽  
Head Component

Recently, there has been an increasing interest in identifying named entities with nested structures. Existing models only make independent typing decisions on the entire entity span while ignoring strong modification relations between sub-entity types. In this paper, we present a novel Recursively Binary Modification model for nested named entity recognition. Our model utilizes the modification relations among sub-entities types to infer the head component on top of a Bayesian framework and uses entity head as a strong evidence to determine the type of the entity span. The process is recursive, allowing lower-level entities to help better model those on the outer-level. To the best of our knowledge, our work is the first effort that uses modification relation in nested NER task. Extensive experiments on four benchmark datasets demonstrate that our model outperforms state-of-the-art models in nested NER tasks, and delivers competitive results with state-of-the-art models in flat NER task, without relying on any extra annotations or NLP tools.

scholarly journals CWPC_BiAtt: Character–Word–Position Combined BiLSTM-Attention for Chinese Named Entity Recognition

Information ◽  
2020 ◽  
Vol 11 (1) ◽  
pp. 45 ◽  
Author(s):  
Shardrom Johnson ◽  
Sherlock Shen ◽  
Yuanchen Liu
Keyword(s):  
Language Processing ◽  
Short Term Memory ◽  
Conditional Random Field ◽  
Named Entity Recognition ◽  
Attention Mechanism ◽  
Entity Recognition ◽  
Position Information ◽  
Named Entity ◽  
Pos Tagging ◽  
Word Position

Usually taken as linguistic features by Part-Of-Speech (POS) tagging, Named Entity Recognition (NER) is a major task in Natural Language Processing (NLP). In this paper, we put forward a new comprehensive-embedding, considering three aspects, namely character-embedding, word-embedding, and pos-embedding stitched in the order we give, and thus get their dependencies, based on which we propose a new Character–Word–Position Combined BiLSTM-Attention (CWPC_BiAtt) for the Chinese NER task. Comprehensive-embedding via the Bidirectional Llong Short-Term Memory (BiLSTM) layer can get the connection between the historical and future information, and then employ the attention mechanism to capture the connection between the content of the sentence at the current position and that at any location. Finally, we utilize Conditional Random Field (CRF) to decode the entire tagging sequence. Experiments show that CWPC_BiAtt model we proposed is well qualified for the NER task on Microsoft Research Asia (MSRA) dataset and Weibo NER corpus. A high precision and recall were obtained, which verified the stability of the model. Position-embedding in comprehensive-embedding can compensate for attention-mechanism to provide position information for the disordered sequence, which shows that comprehensive-embedding has completeness. Looking at the entire model, our proposed CWPC_BiAtt has three distinct characteristics: completeness, simplicity, and stability. Our proposed CWPC_BiAtt model achieved the highest F-score, achieving the state-of-the-art performance in the MSRA dataset and Weibo NER corpus.

scholarly journals Information Extraction from Electronic Medical Records Using Multitask Recurrent Neural Network with Contextual Word Embedding

2019 ◽  
Vol 9 (18) ◽  
pp. 3658 ◽  
Author(s):  
Jianliang Yang ◽  
Yuenan Liu ◽  
Minghui Qian ◽  
Chenghua Guan ◽  
Xiangfei Yuan
Keyword(s):  
Electronic Medical Records ◽  
Medical Records ◽  
Large Scale ◽  
Short Term Memory ◽  
Conditional Random Field ◽  
Named Entity Recognition ◽  
Recognition Task ◽  
Entity Recognition ◽  
Language Models ◽  
Named Entity

Clinical named entity recognition is an essential task for humans to analyze large-scale electronic medical records efficiently. Traditional rule-based solutions need considerable human effort to build rules and dictionaries; machine learning-based solutions need laborious feature engineering. For the moment, deep learning solutions like Long Short-term Memory with Conditional Random Field (LSTM–CRF) achieved considerable performance in many datasets. In this paper, we developed a multitask attention-based bidirectional LSTM–CRF (Att-biLSTM–CRF) model with pretrained Embeddings from Language Models (ELMo) in order to achieve better performance. In the multitask system, an additional task named entity discovery was designed to enhance the model’s perception of unknown entities. Experiments were conducted on the 2010 Informatics for Integrating Biology & the Bedside/Veterans Affairs (I2B2/VA) dataset. Experimental results show that our model outperforms the state-of-the-art solution both on the single model and ensemble model. Our work proposes an approach to improve the recall in the clinical named entity recognition task based on the multitask mechanism.

Named Entity System for Tweets in Hindi Language

2018 ◽  
Vol 14 (4) ◽  
pp. 55-76 ◽  
Author(s):  
Arti Jain ◽  
Anuja Arora
Keyword(s):  
Conditional Random Field ◽  
Named Entity Recognition ◽  
Entity Recognition ◽  
Processing Stage ◽  
Learning Stage ◽  
Named Entity ◽  
Health Related ◽  
Hindi Language ◽  
Demand For Health ◽  
Health Applications

Due to the growing need of smart-health applications in Hindi language, there is a rapid demand for health-related Named Entity Recognition (NER) system for Hindi. For the purpose of the same, this research considers Twitter social network to extract tweets dated 1st October 2016 to 15th October 2017 from Patanjali, Dabur and other Hindi language-oriented Twitter based health sites; while considering four NE types- Person, Disease, Consumable and Organization. To the best of its knowledge, the considered Twitter dataset and NE types for Hindi language is one of the first resources that is being taken care. This article introduces three stage NER system for Tweets in Hindi language (HinTwtNER system)- pre-processing stage; machine Learning stage (Hyperspace Analogue to Language (HAL) and Conditional Random Field (CRF)); and post-processing stage. HinTwtNER looks into binary features and achieves an overall F-score of 49.87% which is comparable to the Twitter based NER systems for English and other languages.

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