Marasmioid and gymnopoid fungi of the Republic of Korea. 8. Gymnopus section Impudicae

Phytotaxa ◽  
2016 ◽  
Vol 286 (2) ◽  
pp. 75 ◽  
Author(s):  
RHIM RYOO ◽  
VLADIMÍR ANTONÍN ◽  
KANG-HYEON KA ◽  
MICHAL TOMŠOVSKÝ

Collections of Gymnopus sect. Impudicae from the Republic of Korea are evaluated. Three recorded species (G. densilamellatus, G. similis, and G. variicolor) are described as new for the science: Gymnopus densilamellatus is macroscopically characterized as having a brown to reddish brown, sometimes pale ochraceous and later whitish pileus and crowded lamellae. Gymnopus similis has an ochraceous-grey, brownish orange or brownish red pileus, and moderately distant, whitish, later dirty yellowish, greyish, or brownish orange or light brown lamellae. Gymnopus variicolor is characterized by a reddish brown, brownish red or violet brown pileus drying-up to light brown or brown, greyish brown or greyish red, later pale brownish orange lamellae, and greyish brown or greyish red pileus, grey-brown, light to reddish brown in upper part. Gymnopus dysodes is recorded for the first time in Korea. The morphological characteristics of the species are provided with a key for their identification. The taxonomic positions of all taxa are confirmed by the DNA sequences of the internal transcribed spacer region and the large subunit of ribosomal rRNA gene.

2013 ◽  
Vol 63 (Pt_10) ◽  
pp. 3892-3895 ◽  
Author(s):  
Tao Zhang ◽  
Rong-Liang Jia ◽  
Yu-Qin Zhang ◽  
Hong-Yu Liu ◽  
Jing Su ◽  
...  

Two yeast strains isolated from soil crusts in the Shapotou region of Tengger Desert (north-western China) were grouped in the genus Kurtzmanomyces based on morphological characteristics. rRNA gene sequence analyses (including the D1/D2 domain of the large subunit rRNA gene and internal transcribed spacer region) indicated that these two strains represented a novel species of the genus Kurtzmanomyces, for which the name Kurtzmanomyces shapotouensis sp. nov. is proposed (type strain: CPCC 300020T = DSM 26579T = CBS 12707T). The MycoBank number of the novel species is MB 804959.


2019 ◽  
Vol 57 (6) ◽  
pp. 647-656
Author(s):  
Seongjun Choe ◽  
Ki-Jeong Na ◽  
Youngjun Kim ◽  
Dong-Hyuk Jeong ◽  
Jeong-Jin Yang ◽  
...  

<i>Isthmiophora</i> <i>hortensis</i> (Digenea: Echinostomatidae) is a dominant echinostome in animal reservoir hosts and humans in the Republic of Korea (Korea). We intended to investigate the infection status with this echinostome species in the several species of wild animals and describe the morphological characteristics in the faunistic view point. A total of 175 animal carcasses belonging to 3 families, i.e., Canidae, Felidae and Mustelidae, were collected from the southern regions of Korea from March 2010 to July 2017. <i>Isthmiophora</i> spp. worms were recovered from the small intestines of each animal under a stereomicroscope after washing of intestinal contents. <i>Isthmiophora</i> <i>hortensis</i> was recovered from 4 species of wild carnivores, i.e., <i>Nyctereutes</i> <i>procyonoides</i> (3/107: 2.8%), <i>Mustela</i> <i>sibirica</i> (11/31: 35.5%), <i>Meles</i> <i>lucurus</i> (2/3: 33.3%) and <i>Martes</i> <i>flavigula</i> (1/2: 50%). The other 3 carnivores comprising stray dogs, cat and leopard cat were negative for <i>I</i>. <i>hortensis</i> infection (0/2, 0/10 and 0/12, respectively). Specimens obtained from the <i>Lutra</i> <i>lutra</i> (6/8: 75%) were identified as a distinct species, <i>I</i>. <i>inermis</i>, by morphological comparison. <i>Isthmiophora</i> <i>inermis</i> has thinner body, elongate testes and different anterior limits of vitelline fields. Detailed morphological descriptions and comparisons with the morphological characteristics are provided. Conclusively, it was confirmed for the first time that 3 species of mustelid mammals, i.e., <i>M</i>. <i>sibirica</i>, <i>M</i>. <i>lucurus</i>, and <i>M</i>. <i>flavigula</i>, are to be the new definitive hosts of <i>I</i>. <i>hortensis</i> in Korea. Additionally, <i>I</i>. <i>inermis</i> is to be newly added in the Korean echinostome fauna.


Biomolecules ◽  
2021 ◽  
Vol 11 (1) ◽  
pp. 98
Author(s):  
Lidia Błaszczyk ◽  
Agnieszka Waśkiewicz ◽  
Karolina Gromadzka ◽  
Katarzyna Mikołajczak ◽  
Jerzy Chełkowski

The occurrence and diversity of Lecanicillium and Sarocladium in maize seeds and their role in this cereal are poorly understood. Therefore, the present study aimed to investigate Sarocladium and Lecanicillium communities found in endosphere of maize seeds collected from fields in Poland and their potential to form selected bioactive substances. The sequencing of the internally transcribed spacer regions 1 (ITS 1) and 2 (ITS2) and the large-subunit (LSU, 28S) of the rRNA gene cluster resulted in the identification of 17 Sarocladium zeae strains, three Sarocladium strictum and five Lecanicillium lecanii isolates. The assay on solid substrate showed that S. zeae and S. strictum can synthesize bassianolide, vertilecanin A, vertilecanin A methyl ester, 2-decenedioic acid and 10-hydroxy-8-decenoic acid. This is also the first study revealing the ability of these two species to produce beauvericin and enniatin B1, respectively. Moreover, for the first time in the present investigation, pyrrocidine A and/or B have been annotated as metabolites of S. strictum and L. lecanii. The production of toxic, insecticidal and antibacterial compounds in cultures of S. strictum, S. zeae and L. lecanii suggests the requirement to revise the approach to study the biological role of fungi inhabiting maize seeds.


Author(s):  
Heung-Chul Kim ◽  
Ju Jiang ◽  
Jun Hang ◽  
Su Yeon Kim ◽  
Seok-Min Yun ◽  
...  

Abstract In a follow-up to the investigations of soft ticks identified from seabird nest soil and litter collected from coastal islands of the Republic of Korea (ROK), Ornithodoros sawaii and Ornithodoros capensis were assessed for the presence and identification of rickettsiae. Ticks collected from samples of 50–100 g of nest litter and soil from seabird nests were identified individually by morphological techniques, and species confirmed by sequencing of the mt-rrs gene. Subsequently, tick DNA preparations were screened for the presence of rickettsiae using a genus-specific nested PCR (nPCR) assay targeting the 17 kDa antigen gene. The amplicons from the 17 kDa assay and two additional nPCR assays targeting the gltA and ompB gene fragments were sequenced and used to identify the rickettsiae. A total of 134 soft ticks belonging to two species, O. sawaii Kitaoka & Suzuki 1973 (n = 125) and O. capensis Neumann 1901 (n = 9), were collected. Rickettsia lusitaniae DNA was detected and identified among O. sawaii ticks (n = 11, 8.8%) collected from nest litter and soil of the Japanese murrelet (Synthliboramphus wumizusume Temminck 1836) at Gugul Island along the western coastal area of the ROK. This study confirmed for the first time the presence of R. lusitaniae associated with O. sawaii collected from migratory seabird nests in the ROK.


Author(s):  
So-Ra Ko ◽  
Ve Van Le ◽  
Long Jin ◽  
Sang-Ah Lee ◽  
Chi-Yong Ahn ◽  
...  

A novel Gram-stain-negative, rod-shaped, aerobic, non-motile bacterial strain, designated M5A1MT, was isolated from seawater collected from the South Sea of the Republic of Korea. Based on 16S rRNA gene sequence similarity, strain M5A1MT was closely related to Mariniflexile gromovii KMM 6038T (95.3 %), Mariniflexile fucanivorans SW5T (95.2 %), Mariniflexile soesokkakense RSSK-9T (95.1 %), Yeosuana aromativorans GW1-1T (94.6 %) and Confluentibacter lentus HJM-3T (94.6 %). Genome-based phylogenetic analyses revealed that strain M5A1MT formed a distinct cluster with the type strains of the genus Mariniflexile . The major cellular fatty acid constituents (>5 % of the total fatty acids) were iso-C15:0, anteiso-C15 : 0, iso-C15 : 0 3-OH, iso-C15 : 1 G, iso-C16:03-OH and iso-C17 : 0 3-OH. The respiratory quinone was identified as MK-6. The major polar lipids were phosphatidylethanolamine and one unidentified polar lipid. The genomic DNA G+C content of strain M5A1MT was determined to be 37.7 mol%. On the basis of its phenotypic, phylogenetic and chemotaxonomic characteristics, strain M5A1MT is considered to represent a novel species within the genus Mariniflexile , for which the name Mariniflexile maritimum sp. nov. is proposed. The type strain is M5A1MT (=KCTC 72895T=JCM 33982T).


2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Kyunghoi Kim

Deterioration of sediment quality has been found in the Nakdong River Estuary after large-scale reclamations. Here, I report microbial diversity in sediments of Nakdong River Estuary in the Republic of Korea based on 16S rRNA gene sequencing by next-generation sequencing (NGS) techniques.


2012 ◽  
Vol 62 (Pt_12) ◽  
pp. 3095-3098 ◽  
Author(s):  
Wan-Qiu Liu ◽  
Pei-Jie Han ◽  
Jun-Zhi Qiu ◽  
Qi-Ming Wang

Two strains isolated from rotten wood were included in the Saccharomyces group based on morphological characteristics. However, rRNA gene sequence analyses (including the 18S rRNA gene, 26S rRNA gene D1/D2 domain and internal transcribed spacer region) indicated that these two strains represent a novel species of Naumovozyma, for which the name Naumovozyma baii sp. nov. is proposed (type strain: BW 22T = CGMCC 2.04520T = CBS 12642T). The MycoBank number of the new species is MB800484.


2013 ◽  
Vol 63 (Pt_8) ◽  
pp. 3115-3123 ◽  
Author(s):  
Neža Čadež ◽  
Dénes Dlauchy ◽  
Peter Raspor ◽  
Gábor Péter

Nine methanol-assimilating yeast strains isolated from olive oil sediments in Slovenia, extra virgin olive oil from Italy and rotten wood collected in Hungary were found to form three genetically separated groups, distinct from the currently recognized yeast species. Sequence analysis from genes of the small subunit (SSU) rRNA, internal transcribed spacer region/5.8S rRNA, large subunit (LSU) rRNA D1/D2 domains and translational elongation factor-1α (EF-1α) revealed that the three closely related groups represent three different undescribed yeast species. Sequence analysis of the LSU rRNA gene D1/D2 domains placed the novel species in the Ogataea clade. The three novel species are designated as Ogataea kolombanensis sp. nov. (type strain: ZIM 2322T = CBS 12778T = NRRL Y-63657T), Ogataea histrianica sp. nov. (type strain: ZIM 2463T = CBS 12779T = NRRL Y-63658T) and Ogataea deakii sp. nov. (type strain: NCAIM Y.01896T = CBS 12735T = NRRL Y-63656T).


2020 ◽  
Vol 11 ◽  
Author(s):  
Indunil C. Senanayake ◽  
Jayarama D. Bhat ◽  
Ratchadawan Cheewangkoon ◽  
Ning Xie

A survey of bambusicolous fungi in Bijiashan Mountain Park, Shenzhen, Guangdong Province, China, revealed several Arthrinium-like taxa from dead sheaths, twigs, and clumps of Bambusa species. Phylogenetic relationships were investigated based on morphology and combined analyses of the internal transcribed spacer region (ITS), large subunit nuclear ribosomal DNA (LSU), beta tubulin (β-tubulin), and translation elongation factor 1-alpha (tef 1-α) gene sequences. Based on morphological characteristics and phylogenetic data, Arthrinium acutiapicum sp. nov. and Arthrinium pseudorasikravindrae sp. nov. are introduced herein with descriptions and illustrations. Additionally, two new locality records of Arthrinium bambusae and Arthrinium guizhouense are described and illustrated.


Pathogens ◽  
2021 ◽  
Vol 10 (11) ◽  
pp. 1424
Author(s):  
Ji-Young Kwon ◽  
Ji-Ye Seo ◽  
Tae-Yun Kim ◽  
Hee-Il Lee ◽  
Jung-Won Ju

Encephalitozoon intestinalis and Enterocytozoon bieneusi can cause diarrhea in humans, especially severe diarrhea in immunocompromised patients. However, there have been few studies on Enc. intestinalis and Ent. bieneusi in patients with acute diarrhea in the Republic of Korea (ROK). In this study, fecal samples were collected from 1241 patients with acute diarrhea in 2020. Among these, 24 cases of Enc. intestinalis and one case of Ent. bieneusi were detected via PCR amplification of small subunit ribosomal RNA. Genotyping of the internal transcribed spacer region sequence revealed that the detected Ent. bieneusi genotype was in Group 1. This study provides the first evidence that Ent. bieneusi exists in humans in addition to animals in the ROK. To identify the causative agent, continuous monitoring of Enc. intestinalis and Ent. bieneusi is necessary for patients with acute diarrhea in the ROK.


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