Combined multi-gene backbone tree for the genus Coniochaeta with two new species from Uzbekistan

Phytotaxa ◽  
2018 ◽  
Vol 336 (1) ◽  
pp. 43 ◽  
Author(s):  
MILAN C. SAMARAKOON ◽  
YUSUFJON GAFFOROV ◽  
NINGGUO LIU ◽  
SAJEEWA S. N. MAHARACHCHIKUMBURA ◽  
JAYARAMA D. BHAT ◽  
...  

The genus Coniochaeta is an important ascomycete because its members live in diversified habitats and nutritional modes. In this study, two new species, C. acaciae and C. coluteae, are introduced from dead branches of Acacia sp. and Colutea paulsenii Freyn (both Fabaceae) respectively from Uzbekistan, based on morphological and phylogenetic studies. Analyses of combined ITS and LSU sequence data with Genealogical Concordance Phylogenetic Species Recognition (GCPSR) and comparison of similar taxa, provide evidences for placement of these new species in Coniochaeta, as distinct lineages.

MycoKeys ◽  
2018 ◽  
Vol 36 ◽  
pp. 83-105 ◽  
Author(s):  
Jing Yang ◽  
Jian-Kui Liu ◽  
Kevin D. Hyde ◽  
E.B. Gareth Jones ◽  
Zuo-Yi Liu

A survey of freshwater fungi on submerged wood in China and Thailand resulted in the collection of three species in Dictyocheirospora and four species in Dictyosporium including two new species in the latter genus. Morphological characters and phylogenetic analyses based on ITS, LSU and TEF1α sequence data support their placement in Dictyocheirospora and Dictyosporium (Dothideomycetes). An updated backbone tree is provided for the family Dothideomycetes. Descriptions and illustrations of the new taxa and re-collections are provided. Four new combinations are proposed for Dictyocheirospora.


Phytotaxa ◽  
2021 ◽  
Vol 524 (4) ◽  
pp. 283-292
Author(s):  
XINGGUO TIAN ◽  
SAMANTHA C. KARUNARATHNA ◽  
AUSANA MAPOOK ◽  
JIANCHU XU ◽  
DANFENG BAO ◽  
...  

A new species of Koorchaloma is described based on morphology and multigene phylogenetic analyses of ITS, LSU and RPB2. Phylogenetic analyses showed our strain clusters with K. europaea with moderate statistical support. Koorchaloma oryzae sp. nov. is morphologically similar to K. europaea, but it can be distinguished by the conidiophores and conidia, while ITS pairwise nucleotide comparison of these two species also revealed differences. Koorchaloma oryzae is compared with all known Koorchaloma species, and a key to Koorchaloma species is provided. Genealogical concordance phylogenetic species recognition analysis (PHI test) results of the new species and closely related species are also given.


Zootaxa ◽  
2020 ◽  
Vol 4821 (3) ◽  
pp. 487-510
Author(s):  
JINGHUAI ZHANG ◽  
PAT HUTCHINGS ◽  
INGO BURGHARDT ◽  
ELENA KUPRIYANOVA

In May–June 2017 an expedition on board RV ‘Investigator’ sampled benthic communities along the lower slope and abyss of eastern Australia from off Tasmania to the Coral Sea. Over 200 sabellariid specimens of the genera Phalacrostemma and Gesaia were collected during the voyage and deposited in the Australian Museum. Here we describe two new species Gesaia csiro n. sp. (4414–4436 m) and Phalacrostemma timoharai n. sp. (1013–1093 m). We did not formally describe another species of Phalacrostemma due to poor condition of the single specimen. Gesaia csiro n. sp. is the first record of the genus from Australian waters (only a planktonic larva attributed to the genus has previously been recorded), and it can be distinguished from other congeners by the smooth surface of inner paleae, distal thecae of outer paleae with long, irregular and expanded distal fringe and circled distal margin. Phalacrostemma timoharai n. sp. differs from congeners by the following combination of characters: presence of the buccal flap, absence of tentacular filament, 18–22 pairs of outer paleae, two pairs of neuropodial cirri on first thoracic segment, and only one pair of lateral lobes on second thoracic segment. Morphological descriptions are accompanied by mitochondrial cytochrome c oxidase subunit 1 (COI) and ribosomal (16S, 18S and 28S) sequence data. A key to all Australian species of sabellariids is given.


Phytotaxa ◽  
2018 ◽  
Vol 362 (2) ◽  
pp. 187 ◽  
Author(s):  
MING-JIE WEI ◽  
HUANG ZHANG ◽  
WEI DONG ◽  
SARANYAPHAT BOONMEE ◽  
DI ZHANG

During our ongoing investigations of freshwater fungi in Thailand, three new chaetosphaeriaceous species, Chloridium aquaticum, Chloridium aseptatum and Dictyochaeta aquatica, were found on submerged wood in freshwater habitats. To determine their placement, a phylogenetic analysis of combined LSU and ITS sequence data was performed. Chloridium aquaticum is the only species having proliferating conidiophores and holoblastic conidiogenous cell in Chloridium. A detailed description and illustrations of the taxa is provided and phylogenetic relationship between the new taxa and their relatives are compared and discussed.


Phytotaxa ◽  
2021 ◽  
Vol 480 (1) ◽  
pp. 45-56
Author(s):  
YI-LE WAN ◽  
DAN-FENG BAO ◽  
ZONG-LONG LUO ◽  
DARBHE-JAYARAMA BHAT ◽  
YUE-XIN XU ◽  
...  

During a survey on diversity of freshwater fungi along a north-south latitudinal gradient in Asia, three fresh specimens of Minimelanolocus were collected from submerged wood in streams in northwestern Yunnan Province, China. Based on their distinct morphological features and phylogenetic analyses of combined ITS, LSU and SSU sequence data, Minimelanolocus nujiangensis and M. clavatus are described as new species and M. submersus was recollected from Yunnan, China. Illustrations and descriptions with notes of the three species are provided. This study increases the known diversity of Minimelanolocus and enriches freshwater fungal resources.


2020 ◽  
Vol 6 (1) ◽  
pp. 1-24
Author(s):  
M. Hernández-Restrepo ◽  
A. Giraldo ◽  
R. van Doorn ◽  
M.J. Wingfield ◽  
J.Z. Groenewald ◽  
...  

The Genera of Fungi series, of which this is the sixth contribution, links type species of fungal genera to their morphology and DNA sequence data. Five genera of microfungi are treated in this study, with new species introduced in Arthrographis, Melnikomyces, and Verruconis. The genus Thysanorea is emended and two new species and nine combinations are proposed. Kramasamuha sibika, the type species of the genus, is provided with DNA sequence data for first time and shown to be a member of Helminthosphaeriaceae (Sordariomycetes). Aureoconidiella is introduced as a new genus representing a new lineage in the Dothideomycetes.


Zootaxa ◽  
2007 ◽  
Vol 1562 (1) ◽  
pp. 43-53
Author(s):  
MOHSEN MOFIDI-NEYESTANAK ◽  
DONALD L.J. QUICKE

Eupholidoptera karatolosi Mofidi-Neyestanak & Quicke from Greece and E. mirzayani Mofidi-Neyestanak & Quicke from Iran, two new species of bushcrickets (Orthoptera, Tettigoniidae: Platycleidini), are described and distinguished from closely related species based on morphology. Species relationships within Eupholidoptera Maran are discussed and some species are given new assignments. A simplified illustrated identification key to the species of Eupholidoptera is provided to accommodate the new species. They are being described since they have been used to generate DNA sequence data that will be published elsewhere as part of a phylogenetic study of the tribe Platycleidini.


Zootaxa ◽  
2019 ◽  
Vol 4701 (3) ◽  
pp. 301-234
Author(s):  
MICHAEL P. HAMMER ◽  
GERALD R. ALLEN ◽  
KEITH C. MARTIN ◽  
MARK ADAMS ◽  
PETER J. UNMACK

The ‘maccullochi species group’ of rainbowfishes are small and distinctly patterned freshwater fishes of streams and swamps, comprising around eight species. The species from which the group bears its name, Melanotaenia maccullochi Ogilby, 1915, has been thought to comprise three forms occurring in distinct geographic areas, and recent mitochondrial genetic data provides matching patterns of likely inter-specific divergence. Here we undertake a detailed investigation of the taxonomic status of M. maccullochi using a combined lines of evidence approach incorporating multiple nuclear genetic markers (55 allozyme loci), mitochondrial DNA sequence data (1141 bp cytochrome b) and morphology (examination of a suite of 38 morphometric and meristic characters). As all three datasets provide support for a three-way split, we accordingly describe two new species and redescribe M. maccullochi sensu stricto. McCulloch’s Rainbowfish M. maccullochi, a species with brown body stripes and red fins occurs in northeast Queensland and is redescribed based on 338 specimens, 13.1–53.0 mm SL. This species was one of the first rainbowfishes to become known in the aquarium hobby. A second form with darker stripes on a contrasting light white-grey body and with distinct sub-marginal black bands in the dorsal and anal fins, distributed across northern and eastern Cape York Peninsula, Torres Strait and southern central New Guinea, is described as Sahul Rainbowfish M. sahulensis sp. nov. based on 267 specimens, 13.4–48.4 mm SL. A diminutive and well geographically isolated form occurring below the escarpment of the Tabletop Range in Litchfield National Park, Northern Territory possessing a more prominent and purplish mid-lateral stripe, is described as the Little Rainbowfish Melanotaenia wilsoni sp. nov. based on 50 specimens, 19.3–33.3 mm SL. A combination of morphological characters is useful for separating the respective taxa with M. wilsoni sp. nov. the most distinctive, typically having fewer vertebrae, lateral scales, cheek scales, procurrent caudal rays and anal rays and proportionally a shorter maxilla and snout than either of the other two species. Useful characters for further separating M. sahulensis sp. nov. from M. maccullochi include slightly higher counts of vertebrae, lateral scales and anal rays and proportionally greater body depth, body width and pre-dorsal distance. Information on the known distribution, habitats and conservation status of the three species is summarised, with the Northern Territory species being a narrow-range endemic with specific environmental requirements. 


Zootaxa ◽  
2019 ◽  
Vol 4683 (4) ◽  
pp. 531-551
Author(s):  
DARRYL L. FELDER ◽  
RAFAEL LEMAITRE ◽  
CATHERINE CRAIG

Coloration, gene-sequence data (H3, 12s, 16s), and subtle features in morphology support the description of two new species, both formerly regarded to represent accepted variants of Phimochirus holthuisi s.l. While color in life consistently separates these species from P. holthuisi s.s. and from each other, morphological distinctions are subtle and less than absolute in small specimens, being based on ventral spine counts of walking leg dactyls and relative development of the superior crest on the major chela. Molecular phylogenetic analyses clearly support the separation of sister clades, representing two new species, from P. holthuisi s.s. as well as other congeners available for analysis. Both of the new species are presently known to occur widely throughout the northern Gulf of Mexico, though one occurs more commonly in the northeastern and southeastern Gulf, and may range as far south as Suriname. The other has been taken primarily in the northwestern Gulf, and is not known from outside Gulf waters. While both of the new species appear restricted to relatively deep subtidal waters of the continental shelf, Phimochirus holthuisi s.s. is instead more commonly found in shallow nearshore tropical waters on or near coral reefs. Previous literature reports of P. holthuisi usually represent, at least in part, one or both of these two new species. 


Zootaxa ◽  
2020 ◽  
Vol 4729 (4) ◽  
pp. 451-481 ◽  
Author(s):  
RUBÉN ALONSO CARBAJAL-MÁRQUEZ ◽  
JOSÉ ROGELIO CEDEÑO-VÁZQUEZ ◽  
ARELY MARTÍNEZ-ARCE ◽  
EDGAR NERI-CASTRO ◽  
SALIMA C. MACHKOUR- M’RABET

Members of the Crotalus durissus species complex are widely distributed from Mexico to Argentina in areas with mainly seasonally dry tropical deciduous forest. Although four species (C. culminatus, C. durissus, C. simus and C. tzabcan) are currently recognized, species limits remain to be tested. Previous genetic studies suggest that C. durissus and C. simus may be paraphyletic and that at least one cryptic species may be present. We analyzed 2596 bp of DNA sequence data from three mitochondrial and one nuclear gene to infer phylogenetic relationships in the Neotropical rattlesnakes. We also examined museum and wild specimens as well as captive animals to analyze morphological characters. Our results suggest that the current taxonomy of the Crotalus durissus species complex does not reflect evolutionary history. We found strong support for five independent lineages within Crotalus simus (sensu lato), with genetic and morphological evidence for three previously recognized taxa and two new species, as well as three major lineages within C. durissus that each represent species hypothesis to be tested with additional evidence. We also found support to retain C. totonacus in the Crotalus molossus species complex. We suggest conservative taxonomic changes to the complex and related species, but more evidence is needed (e.g., morphology, ecology and venom composition) to clarify relationships among species. 


Sign in / Sign up

Export Citation Format

Share Document