Simulating Competition and Coexistence between Plant Functional Types in a Dynamic Vegetation Model

2006 ◽  
Vol 10 (10) ◽  
pp. 1-30 ◽  
Author(s):  
Vivek K. Arora ◽  
George J. Boer
Keyword(s):  
Terrestrial Ecosystem ◽  
Ecosystem Model ◽  
Plant Functional Types ◽  
Quasi Equilibrium ◽  
Terrestrial Ecosystem Model ◽  
Functional Types ◽  
Dynamic Global Vegetation Models ◽  
Vegetation Models ◽  
Competition Equations ◽  
Global Vegetation

Abstract The global distribution of vegetation is broadly determined by climate, and where bioclimatic parameters are favorable for several plant functional types (PFTs), by the competition between them. Most current dynamic global vegetation models (DGVMs) do not, however, explicitly simulate inter-PFT competition and instead determine the existence and fractional coverage of PFTs based on quasi-equilibrium climate–vegetation relationships. When competition is explicitly simulated, versions of Lotka–Volterra (LV) equations developed in the context of interaction between animal species are almost always used. These equations may, however, exhibit unrealistic behavior in some cases and do not, for example, allow the coexistence of different PFTs in equilibrium situations. Coexistence may, however, be obtained by introducing features and mechanisms such as temporal environmental variation and disturbance, among others. A generalized version of the competition equations is proposed that includes the LV equations as a special case, which successfully models competition for a range of climate and vegetation regimes and for which coexistence is a permissible equilibrium solution in the absence of additional mechanisms. The approach is tested for boreal forest, tropical forest, savanna, and temperate forest locations within the framework of the Canadian Terrestrial Ecosystem Model (CTEM) and successfully simulates the observed successional behavior and the observed near-equilibrium distribution of coexisting PFTs.

scholarly journals Competition between plant functional types in the Canadian Terrestrial Ecosystem Model (CTEM) v. 2.0

2016 ◽  
Vol 9 (1) ◽  
pp. 323-361 ◽  
Author(s):  
J. R. Melton ◽  
V. K. Arora
Keyword(s):  
Spatial Distribution ◽  
Large Scale ◽  
Terrestrial Ecosystem ◽  
Ecosystem Model ◽  
Plant Functional Types ◽  
Atmospheric Composition ◽  
Climate Modelling ◽  
Fractional Coverage ◽  
Terrestrial Ecosystem Model ◽  
Functional Types

Abstract. The Canadian Terrestrial Ecosystem Model (CTEM) is the interactive vegetation component in the Earth system model of the Canadian Centre for Climate Modelling and Analysis. CTEM models land–atmosphere exchange of CO2 through the response of carbon in living vegetation, and dead litter and soil pools, to changes in weather and climate at timescales of days to centuries. Version 1.0 of CTEM uses prescribed fractional coverage of plant functional types (PFTs) although, in reality, vegetation cover continually adapts to changes in climate, atmospheric composition and anthropogenic forcing. Changes in the spatial distribution of vegetation occur on timescales of years to centuries as vegetation distributions inherently have inertia. Here, we present version 2.0 of CTEM, which includes a representation of competition between PFTs based on a modified version of the Lotka–Volterra (L–V) predator–prey equations. Our approach is used to dynamically simulate the fractional coverage of CTEM's seven natural, non-crop PFTs, which are then compared with available observation-based estimates. Results from CTEM v. 2.0 show the model is able to represent the broad spatial distributions of its seven PFTs at the global scale. However, differences remain between modelled and observation-based fractional coverage of PFTs since representing the multitude of plant species globally, with just seven non-crop PFTs, only captures the large-scale climatic controls on PFT distributions. As expected, PFTs that exist in climate niches are difficult to represent either due to the coarse spatial resolution of the model, and the corresponding driving climate, or the limited number of PFTs used. We also simulate the fractional coverage of PFTs using unmodified L–V equations to illustrate its limitations. The geographic and zonal distributions of primary terrestrial carbon pools and fluxes from the versions of CTEM that use prescribed and dynamically simulated fractional coverage of PFTs compare reasonably well with each other and observation-based estimates. The parametrization of competition between PFTs in CTEM v. 2.0 based on the modified L–V equations behaves in a reasonably realistic manner and yields a tool with which to investigate the changes in spatial distribution of vegetation in response to future changes in climate.

scholarly journals Competition between plant functional types in the Canadian Terrestrial Ecosystem Model (CTEM) v. 2.0

2015 ◽  
Vol 8 (6) ◽  
pp. 4851-4948 ◽  
Author(s):  
J. R. Melton ◽  
V. K. Arora
Keyword(s):  
Spatial Distribution ◽  
Large Scale ◽  
Terrestrial Ecosystem ◽  
Ecosystem Model ◽  
Plant Functional Types ◽  
Atmospheric Composition ◽  
Climate Modelling ◽  
Fractional Coverage ◽  
Terrestrial Ecosystem Model ◽  
Functional Types

Abstract. The Canadian Terrestrial Ecosystem Model (CTEM) is the interactive vegetation component in the Earth system model of the Canadian Centre for Climate Modelling and Analysis. CTEM models land–atmosphere exchange of CO2 through the response of carbon in living vegetation, and dead litter and soil pools, to changes in weather and climate at timescales of days to centuries. Version 1.0 of CTEM uses prescribed fractional coverage of plant functional types (PFTs) although, in reality, vegetation cover continually adapts to changes in climate, atmospheric composition, and anthropogenic forcing. Changes in the spatial distribution of vegetation occur on timescales of years to centuries as vegetation distributions inherently have inertia. Here, we present version 2.0 of CTEM which includes a representation of competition between PFTs based on a modified version of the Lotka–Volterra (L–V) predator–prey equations. Our approach is used to dynamically simulate the fractional coverage of CTEM's seven natural, non-crop PFTs which are then compared with available observation-based estimates. Results from CTEM v. 2.0 show the model is able to represent the broad spatial distributions of its seven PFTs at the global scale. However, differences remain between modelled and observation-based fractional coverages of PFTs since representing the multitude of plant species globally, with just seven non-crop PFTs, only captures the large scale climatic controls on PFT distributions. As expected, PFTs that exist in climate niches are difficult to represent either due to the coarse spatial resolution of the model, and the corresponding driving climate, or the limited number of PFTs used. We also simulate the fractional coverages of PFTs using unmodified L–V equations to illustrate its limitations. The geographic and zonal distributions of primary terrestrial carbon pools and fluxes from the versions of CTEM that use prescribed and dynamically simulated fractional coverage of PFTs compare reasonably well with each other and observation-based estimates. The parametrization of competition between PFTs in CTEM v. 2.0 based on the modified L–V equations behaves in a reasonably realistic manner and yields a tool with which to investigate the changes in spatial distribution of vegetation in response to future changes in climate.

scholarly journals Seasonal leaf dynamics for tropical evergreen forests in a process based global ecosystem model

2012 ◽  
Vol 5 (1) ◽  
pp. 639-681 ◽  
Author(s):  
M. De Weirdt ◽  
H. Verbeeck ◽  
F. Maignan ◽  
P. Peylin ◽  
B. Poulter ◽  
...  
Keyword(s):  
Carbon Flux ◽  
Net Primary Production ◽  
Terrestrial Ecosystem ◽  
Ecosystem Model ◽  
Dry Season ◽  
Water Fluxes ◽  
Flux Tower ◽  
Terrestrial Ecosystem Model ◽  
Leaf Litterfall ◽  
Global Vegetation

Abstract. The influence of seasonal phenology in tropical humid forests on canopy photosynthesis remains poorly understood and its representation in global vegetation models highly simplified, typically with no seasonal variability of canopy leaf area properties taken into account. However, recent flux tower and remote sensing studies suggest that seasonal phenology in tropical rainforests exerts a large influence over carbon and water fluxes, with feedbacks that can significantly influence climate dynamics. A more realistic description of the underlying mechanisms that drive seasonal tropical forest photosynthesis and phenology could improve the correspondence of global vegetation model outputs with the wet-dry season biogeochemical patterns measured at flux tower sites. Here, we introduce a leaf Net Primary Production (NPP) based canopy dynamics scheme for evergreen tropical forests in the global terrestrial ecosystem model ORCHIDEE and validated the new scheme against in-situ carbon flux measurements. Modelled Gross Primary Productivity (GPP) patterns are analyzed in details for a flux tower site in French Guiana, in a forest where the dry season is short and where the vegetation is considered to have developed adaptive mechanisms against drought stress. By including leaf litterfall seasonality and a coincident light driven leaf flush and seasonal change in photosynthetic capacity in ORCHIDEE, modelled carbon and water fluxes more accurately represent the observations. The fit to GPP flux data was substantially improved and the results confirmed that by modifying canopy dynamics to benefit from increased light conditions, a better representation of the seasonal carbon flux patterns was made.

scholarly journals Calibration of the maximum carboxylation velocity (Vcmax) using data mining techniques and ecophysiological data from the Brazilian semiarid region, for use in Dynamic Global Vegetation Models

2016 ◽  
Vol 76 (2) ◽  
pp. 341-351
Author(s):  
L. F. C. Rezende ◽  
B. C. Arenque-Musa ◽  
M. S. B. Moura ◽  
S. T. Aidar ◽  
C. Von Randow ◽  
...  
Keyword(s):  
Data Mining ◽  
Native Species ◽  
Classification And Regression Tree ◽  
Northeastern Brazil ◽  
Semiarid Region ◽  
Global Changes ◽  
Data Mining Techniques ◽  
Dynamic Global Vegetation Models ◽  
Vegetation Models ◽  
Global Vegetation

Abstract The semiarid region of northeastern Brazil, the Caatinga, is extremely important due to its biodiversity and endemism. Measurements of plant physiology are crucial to the calibration of Dynamic Global Vegetation Models (DGVMs) that are currently used to simulate the responses of vegetation in face of global changes. In a field work realized in an area of preserved Caatinga forest located in Petrolina, Pernambuco, measurements of carbon assimilation (in response to light and CO2) were performed on 11 individuals of Poincianella microphylla, a native species that is abundant in this region. These data were used to calibrate the maximum carboxylation velocity (Vcmax) used in the INLAND model. The calibration techniques used were Multiple Linear Regression (MLR), and data mining techniques as the Classification And Regression Tree (CART) and K-MEANS. The results were compared to the UNCALIBRATED model. It was found that simulated Gross Primary Productivity (GPP) reached 72% of observed GPP when using the calibrated Vcmax values, whereas the UNCALIBRATED approach accounted for 42% of observed GPP. Thus, this work shows the benefits of calibrating DGVMs using field ecophysiological measurements, especially in areas where field data is scarce or non-existent, such as in the Caatinga.

scholarly journals Tiling soil textures for terrestrial ecosystem modelling via clustering analysis: a case study with CLASS-CTEM (version 2.1)

2017 ◽  
Author(s):  
Joe R. Melton ◽  
Reinel Sospedra-Alfonso ◽  
Kelly E. McCusker
Keyword(s):  
Soil Texture ◽  
Land Surface ◽  
Clustering Analysis ◽  
Clustering Algorithms ◽  
Terrestrial Ecosystem ◽  
Grid Cell ◽  
Moisture Stress ◽  
Ecosystem Model ◽  
Global Scale ◽  
Terrestrial Ecosystem Model

Abstract. We investigate the application of clustering algorithms to represent sub-grid scale variability in soil texture for use in a global-scale terrestrial ecosystem model. Our model, the coupled Canadian Land Surface Scheme – Canadian Terrestrial Ecosystem Model (CLASS-CTEM), is typically implemented at a coarse spatial resolution (ca. 2.8° × 2.8°) due to its use as the land surface component of the Canadian Earth System Model (CanESM). CLASS-CTEM can, however, be run with tiling of the land surface as a means to represent sub-grid heterogeneity. We first determined that the model was sensitive to tiling of the soil textures via an idealized test case before attempting to cluster soil textures globally. To cluster a high-resolution soil texture dataset onto our coarse model grid, we use two linked algorithms (OPTICS (Ankerst et al., 1999; Daszykowski et al., 2002) and Sander et al. (2003)) to provide tiles of representative soil textures for use as CLASS-CTEM inputs. The clustering process results in, on average, about three tiles per CLASS-CTEM grid cell with most cells having four or less tiles. Results from CLASS-CTEM simulations conducted with the tiled inputs (Cluster) versus those using a simple grid-mean soil texture (Gridmean) show CLASS-CTEM, at least on a global scale, is relatively insensitive to the tiled soil textures, however differences can be large in arid or peatland regions. The Cluster simulation has generally lower soil moisture and lower overall vegetation productivity than the Gridmean simulation except in arid regions where plant productivity increases. In these dry regions, the influence of the tiling is stronger due to the general state of vegetation moisture stress which allows a single tile, whose soil texture retains more plant available water, to yield much higher productivity. Although the use of clustering analysis appears promising as a means to represent sub-grid heterogeneity, soil textures appear to be reasonably represented for global scale simulations using a simple grid-mean value.

scholarly journals Modelling tropical forest responses to drought and El Niño with a stomatal optimization model based on xylem hydraulics

2018 ◽  
Vol 373 (1760) ◽  
pp. 20170315 ◽  
Author(s):  
Cleiton B. Eller ◽  
Lucy Rowland ◽  
Rafael S. Oliveira ◽  
Paulo R. L. Bittencourt ◽  
Fernanda V. Barros ◽  
...  
Keyword(s):  
Tropical Forest ◽  
El Niño ◽  
Optimization Model ◽  
El Nino ◽  
Soil Drought ◽  
Forest Sites ◽  
Dynamic Global Vegetation Models ◽  
Vegetation Models ◽  
Global Vegetation

The current generation of dynamic global vegetation models (DGVMs) lacks a mechanistic representation of vegetation responses to soil drought, impairing their ability to accurately predict Earth system responses to future climate scenarios and climatic anomalies, such as El Niño events. We propose a simple numerical approach to model plant responses to drought coupling stomatal optimality theory and plant hydraulics that can be used in dynamic global vegetation models (DGVMs). The model is validated against stand-scale forest transpiration ( E ) observations from a long-term soil drought experiment and used to predict the response of three Amazonian forest sites to climatic anomalies during the twentieth century. We show that our stomatal optimization model produces realistic stomatal responses to environmental conditions and can accurately simulate how tropical forest E responds to seasonal, and even long-term soil drought. Our model predicts a stronger cumulative effect of climatic anomalies in Amazon forest sites exposed to soil drought during El Niño years than can be captured by alternative empirical drought representation schemes. The contrasting responses between our model and empirical drought factors highlight the utility of hydraulically-based stomatal optimization models to represent vegetation responses to drought and climatic anomalies in DGVMs. This article is part of a discussion meeting issue ‘The impact of the 2015/2016 El Niño on the terrestrial tropical carbon cycle: patterns, mechanisms and implications’.

scholarly journals Fractal properties of forest fires in Amazonia as a basis for modelling pan-tropical burnt area

2014 ◽  
Vol 11 (6) ◽  
pp. 1449-1459 ◽  
Author(s):  
I. N. Fletcher ◽  
L. E. O. C. Aragão ◽  
A. Lima ◽  
Y. Shimabukuro ◽  
P. Friedlingstein
Keyword(s):  
Forest Fires ◽  
Large Scale ◽  
Fire Spread ◽  
Small Scale ◽  
Burnt Area ◽  
Active Fire ◽  
Fractal Properties ◽  
Dynamic Global Vegetation Models ◽  
Vegetation Models ◽  
Global Vegetation

Abstract. Current methods for modelling burnt area in dynamic global vegetation models (DGVMs) involve complex fire spread calculations, which rely on many inputs, including fuel characteristics, wind speed and countless parameters. They are therefore susceptible to large uncertainties through error propagation, but undeniably useful for modelling specific, small-scale burns. Using observed fractal distributions of fire scars in Brazilian Amazonia in 2005, we propose an alternative burnt area model for tropical forests, with fire counts as sole input and few parameters. This model is intended for predicting large-scale burnt area rather than looking at individual fire events. A simple parameterization of a tapered fractal distribution is calibrated at multiple spatial resolutions using a satellite-derived burnt area map. The model is capable of accurately reproducing the total area burnt (16 387 km2) and its spatial distribution. When tested pan-tropically using the MODIS MCD14ML active fire product, the model accurately predicts temporal and spatial fire trends, but the magnitude of the differences between these estimates and the GFED3.1 burnt area products varies per continent.

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