scholarly journals Atlas registration for edema-corrected MRI lesion volume in mouse stroke models

2017 ◽  
Vol 39 (2) ◽  
pp. 313-323 ◽  
Author(s):  
Stefan Koch ◽  
Susanne Mueller ◽  
Marco Foddis ◽  
Thomas Bienert ◽  
Dominik von Elverfeldt ◽  
...  

Lesion volume measurements with magnetic resonance imaging are widely used to assess outcome in rodent models of stroke. In this study, we improved a mathematical framework to correct lesion size for edema which is based on manual delineation of the lesion and hemispheres. Furthermore, a novel MATLAB toolbox to register mouse brain MR images to the Allen brain atlas is presented. Its capability to calculate edema-corrected lesion size was compared to the manual approach. Automated image registration performed equally well in in a mouse middle cerebral artery occlusion model (Pearson r = 0.976, p = 2.265e-11). Information encapsulated in the registration was used to generate maps of edema induced tissue volume changes. These showed discrepancies to simplified tissue models underlying the manual approach. The presented techniques provide biologically more meaningful, voxel-wise biomarkers of vasogenic edema after stroke.

2017 ◽  
Vol 6 (20;6) ◽  
pp. E915-E922 ◽  
Author(s):  
David L. Cedeño

Background: Radiofrequency (RF) ablation for denervation has been utilized for decades in chronic pain management. This relies on the proper targeting of the affected nerve which may be obtained by creating an ablation lesion with a shape and volume that optimizes targeting. Various systems designed to improve lesion size are available. These include cooling the active tip (cooled-RF) and protruding the RF electrode outside the active tip (PERF). Objectives: This study compares lesion volumes of 3 commercially available RF systems: cooled-RF, “V” shaped active cannula and protruding electrode (18 g and 20 g), and monopolar RF (MRF; 16 g, 18 g, and 20 g). Study Design: Ex vivo study using clinically relevant conditions. Setting: Biophysical laboratory in an academic institution. Methods: RF ablation lesions were generated in additive-free chicken breast specimens (n = 10) with the RF probes fully inserted in them. For cooled RF, a 17 g probe (4 mm active tip) was used. RF was applied for 150 seconds at 60°C. PERF was applied using 18 g or 20 g introducers (10 mm active tip) for either 90 or 150 seconds at 80°C. For MRF ablation, introducers diameter were 16 g, 18 g, or 20 g (10 mm active tip), while RF was applied for 90 seconds at 80°C. Tissues were dissected through the midpoint of the lesion, and measurements of the longitudinal, transversal, and depth lengths were taken and used to calculate the lesion volume. Measurements from the distal edge in the transverse and longitudinal directions were also recorded. One-way ANOVA was used to determine statistical significance between volume means (P < 0.05). Results: Mean lesion volume with cooled RF (595 mm3 ) is significantly larger than any other mean volume measured. The second largest volume is produced with MRF using a 16 g introducer (360 mm3 ), which is significantly larger than those obtained with 18 g or 20 g. This is also significantly larger than the one obtained with PERF using an 18 g introducer. Mean lesion volume produced with PERF (80°C for 90 seconds) and an 18 g diameter tip (215 mm3 ) is significantly larger than the respective one produced with MRF (169 mm3 ). Increasing lesioning time to 150 seconds significantly increases the volume (283 mm3 ). Using a 20 g tip produces the smallest lesions at 80°C for 90 seconds with either PERF or MRF, although a lesioning time of 150 seconds makes it significantly larger (207 mm3 ). Limitations: The study is ex vivo and therefore does not account for the dynamic effects of the anatomy and physiology of a living organism. Conclusions: The results indicate that the lesion produced with a cooled-RF system (17 g, 4 mm tip) is significantly larger than that produced with either of the other systems trialed (18 g or 20 g, 10 mm active tip protruding electrode or 16 g, 18 g, or 20 g monopolar electrode). Interestingly, a 16 g, 10 mm active tip monopolar electrode produced a larger lesion than the one produced with the 18 g protruding electrode.


2018 ◽  
Vol 17 (4) ◽  
pp. 299-308 ◽  
Author(s):  
Bogdan Catalin ◽  
Otilia-Constantina Rogoveanu ◽  
Ionica Pirici ◽  
Tudor Adrian Balseanu ◽  
Adina Stan ◽  
...  

Background: Edema represents one of the earliest negative markers of survival and consecutive neurological deficit following stroke. The mixture of cellular and vasogenic edema makes treating this condition complicated, and to date, there is no pathogenically oriented drug treatment for edema, which leaves parenteral administration of a hypertonic solution as the only non-surgical alternative. Objective: New insights into water metabolism in the brain have opened the way for molecular targeted treatment, with aquaporin 4 channels (AQP4) taking center stage. We aimed here to assess the effect of inhibiting AQP4 together with the administration of a neurotropic factor (Cerebrolysin) in ischemic stroke. Methods: Using a permanent medial cerebral artery occlusion rat model, we administrated a single dose of the AQP4 inhibitor TGN-020 (100 mg/kg) at 15 minutes after ischemia followed by daily Cerebrolysin dosing (5ml/kg) for seven days. Rotarod motor testing and neuropathology examinations were next performed. Results: We showed first that the combination treatment animals have a better motor function preservation at seven days after permanent ischemia. We have also identified distinct cellular contributions that represent the bases of behavior testing, such as less astrocyte scarring and a larger neuronalsurvival phenotype rate in animals treated with both compounds than in animals treated with Cerebrolysin alone or untreated animals. Conclusion: Our data show that water diffusion inhibition and Cerebrolysin administration after focal ischemic stroke reduces infarct size, leading to a higher neuronal survival in the peri-core glial scar region.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Kelly M. Scheulin ◽  
Brian J. Jurgielewicz ◽  
Samantha E. Spellicy ◽  
Elizabeth S. Waters ◽  
Emily W. Baker ◽  
...  

AbstractHarnessing the maximum diagnostic potential of magnetic resonance imaging (MRI) by including stroke lesion location in relation to specific structures that are associated with particular functions will likely increase the potential to predict functional deficit type, severity, and recovery in stroke patients. This exploratory study aims to identify key structures lesioned by a middle cerebral artery occlusion (MCAO) that impact stroke recovery and to strengthen the predictive capacity of neuroimaging techniques that characterize stroke outcomes in a translational porcine model. Clinically relevant MRI measures showed significant lesion volumes, midline shifts, and decreased white matter integrity post-MCAO. Using a pig brain atlas, damaged brain structures included the insular cortex, somatosensory cortices, temporal gyri, claustrum, and visual cortices, among others. MCAO resulted in severely impaired spatiotemporal gait parameters, decreased voluntary movement in open field testing, and higher modified Rankin Scale scores at acute timepoints. Pearson correlation analyses at acute timepoints between standard MRI metrics (e.g., lesion volume) and functional outcomes displayed moderate R values to functional gait outcomes. Moreover, Pearson correlation analyses showed higher R values between functional gait deficits and increased lesioning of structures associated with motor function, such as the putamen, globus pallidus, and primary somatosensory cortex. This correlation analysis approach helped identify neuroanatomical structures predictive of stroke outcomes and may lead to the translation of this topological analysis approach from preclinical stroke assessment to a clinical biomarker.


2020 ◽  
Vol 11 (1) ◽  
pp. 48-59
Author(s):  
Martin Juenemann ◽  
Tobias Braun ◽  
Nadine Schleicher ◽  
Mesut Yeniguen ◽  
Patrick Schramm ◽  
...  

AbstractObjectiveThis study was designed to investigate the indirect neuroprotective properties of recombinant human erythropoietin (rhEPO) pretreatment in a rat model of transient middle cerebral artery occlusion (MCAO).MethodsOne hundred and ten male Wistar rats were randomly assigned to four groups receiving either 5,000 IU/kg rhEPO intravenously or saline 15 minutes prior to MCAO and bilateral craniectomy or sham craniectomy. Bilateral craniectomy aimed at elimination of the space-consuming effect of postischemic edema. Diagnostic workup included neurological examination, assessment of infarct size and cerebral edema by magnetic resonance imaging, wet–dry technique, and quantification of hemispheric and local cerebral blood flow (CBF) by flat-panel volumetric computed tomography.ResultsIn the absence of craniectomy, EPO pretreatment led to a significant reduction in infarct volume (34.83 ± 9.84% vs. 25.28 ± 7.03%; p = 0.022) and midline shift (0.114 ± 0.023 cm vs. 0.083 ± 0.027 cm; p = 0.013). We observed a significant increase in regional CBF in cortical areas of the ischemic infarct (72.29 ± 24.00% vs. 105.53 ± 33.10%; p = 0.043) but not the whole hemispheres. Infarct size-independent parameters could not demonstrate a statistically significant reduction in cerebral edema with EPO treatment.ConclusionsSingle-dose pretreatment with rhEPO 5,000 IU/kg significantly reduces ischemic lesion volume and increases local CBF in penumbral areas of ischemia 24 h after transient MCAO in rats. Data suggest indirect neuroprotection from edema and the resultant pressure-reducing and blood flow-increasing effects mediated by EPO.


Stroke ◽  
2012 ◽  
Vol 43 (suppl_1) ◽  
Author(s):  
Gregory Christoforidis ◽  
Cameron Rink ◽  
Nitn Garg ◽  
Shahid Khan ◽  
Chandan Sen

Objective: In order to assess the impact of reperfusion on the degree of subsequent cerebral edema following cerebral ischemia, this work sought to compare 24 hour infarct volume progression between permanent and transient middle cerebral artery occlusion (MCAO) in a canine model. Methods: Using a previously published endovascular transient MCAO method, 5 mongrel canines underwent 1-hour transient MCAO and 5 underwent permanent MCAO. Model parameters were altered to result in varying infarct volumes. Magnetic resonanace imaging (MRI) (3T Achieva, Philips) was performed one hour and 24 hours following reperfusion as well as 60 minutes following permanent occlusion. Infarct volumes were calculated using a previously published threshold technique by two observers using 1 hour mean diffusivity (MD) maps and 24hour FLAIR MRI. Reproducibility was assessed using Bland-Altman statistic. Average infarct volumes between the observers were calculated. Bivariate linear fit analysis were used to assess the correlation between immediate and 24 hours infarct volume determinations. Results: R square (r2) for linear fit was 0.964 (p=0.0005) for permanent occlusion and 0.971 (p= 0.0022) for transient occlusion ( figure 1 ). The infarct volumes measured at 1 hour increased by a factor of 1.42 relative to 24 hour infarct volumes for permanent occlusion and 2.05 for transient occlusion. Bland-Altman statistic indicates that reproducibility using the MD maps (15.9%) and FLAIR images (13.3%) is not substantially different. None of the animals demonstrated hemorrhagic conversion by 24 hours. Conclusion: MD maps generated one hour post reperfusion following transient and permanent MCAO in a canine model can serve as a reliable assessment for infarct volume determination. Increase in infarct volume at 24 hours, presumably due to vasogenic edema, was greater in reperfused infarctions than with permanent occlusion. Figure 1: Bivariate linear fit analysis comparing immediate and 24-hour infarct volume calculations for permanent and transient occlusions.


2005 ◽  
Vol 102 ◽  
pp. 234-240 ◽  
Author(s):  
Chihiro Ohye ◽  
Tohru Shibazaki ◽  
Sumito Sato

Object.The authors studied the effects of gamma knife thalamotomy (GKT) on Parkinson disease-related tremor and essential tremor before and after reloading of radioactive cobalt.Methods.Based on experience in stereotactic thalamotomy aided by depth microrecording, the target was located at the lateral border of the thalamic ventralis intermedius nucleus (VIM). For more precise targeting, the percentage representation of the thalamic VIM in relation to the entire thalamic length is useful. The location of the target was determined on magnetic resonance (MR) imaging and computerized tomography scanning. A maximum dose of 130 Gy was delivered to the target by using a single isocenter with the 4-mm collimator. In more recent cases, a systematic follow-up examination was performed at 3, 6, 12, 18, and 24 months after GKT.Since 1993, the authors have treated 70 patients with PD. Throughout the series the same dosimetric technique has been used. The course after GKT was compared between the 25 cases with PD treated before reloading and the 35 cases treated after reloading. In the majority (80–85%) treated after reloading, tremor and rigidity were reduced around 6 months after GKT. In the cases treated before reloading this effect took approximately 1 year. The thalamic reaction on MR imaging showed the same two lesion types in both series: a restricted and a diffuse. After reloading the restricted lesion was more frequent and the lesion volume was smaller.Conclusions.The shorter delay in clinical improvement and smaller lesion size may be related to an increased radiation dose.


Stroke ◽  
2001 ◽  
Vol 32 (suppl_1) ◽  
pp. 352-352
Author(s):  
Fuhai Li ◽  
Matthew D Silva ◽  
Xiangjun Meng ◽  
Christopher H Sotak ◽  
Marc Fisher

P75 Background and Purpose: Previous studies demonstrated that secondary ischemic lesions documented by diffusion-weighted imaging might be smaller than, larger than or similar to initial lesions that occur during ischemia. The purpose of this study was to investigate if the size of secondary lesions can be predicted. Methods: Twelve rats underwent 30 minutes of transient middle cerebral artery occlusion with the intraluminal suture method. Diffusion- and perfusion-weighted images were performed just before reperfusion, 90 minutes and 24 hours after reperfusion. The ischemic lesion size was calculated by tracing visual abnormalities on the apparent diffusion coefficient (ADC) maps. Cerebral blood flow index (CBF i ) ratio was calculated by dividing the ipsilateral CBF i by the contralateral CBF i . Based on difference between initial and secondary lesion volume, rats were assigned to reperfusion-benefit group (n=6) where secondary lesions were smaller than initial lesions (less than 85% of initial lesions) and reperfusion-nonbenefit group (n=6) where secondary lesions were similar to or larger than initial lesions (more than 85% of initial lesions). Results: At 90 minutes after reperfusion, the initial ischemic lesions almost disappeared in both groups. At 24 hours, secondary lesions were 54±11% (mean±SD) of the initial lesions in the reperfusion-benefit group and 100±14% of the initial lesions in the reperfusion-nonbenefit group (p<0.001). There was no difference in ADC values (47±2×10 -5 mm 2 /s vs 46±5×10 -5 mm 2 /s, p=0.7) and CBF i ratio (0.62±0.06 vs 0.67±0.04, p=0.2) between the two groups before reperfusion. However, the initial lesion volume was significantly smaller in the reperfusion-benefit group than in the reperfusion-nonbenefit group (125±54 mm 3 vs 195±36 mm 3 , p=0.037). Conclusions: Changes of ADC values and CBF before reperfusion are unable to predict if initial ischemic lesions will eventually shrink or not after reperfusion. Smaller size of initial lesions may suggest that secondary lesions will be smaller than initial lesions.


Stroke ◽  
2012 ◽  
Vol 43 (suppl_1) ◽  
Author(s):  
Randall S Carpenter ◽  
Cyrus L Hinkson ◽  
Peter H King ◽  
Agnieszka A Ardelt

Introduction: Stroke is a serious neurological disorder that affects more than 800,000 Americans each year. HuR, an mRNA binding protein, regulates gene expression by modulating the stability and translational efficiency of mRNAs containing adenine-uridine rich elements in the 3’ untranslated region. Genes implicated in neuroprotection and post-ischemic repair may be regulated by HuR. The current investigation utilizes transgenic mice engineered to express Flag-HuR in astrocytes using the glial fibrillary acidic protein (GFAP) promoter. We hypothesized that modulation of mRNA stability in astrocytes would change the outcome from transient cerebral ischemia. Methods: Four mouse cohorts were studied: male or female and transgenic (TG) or wild-type (WT). Mice underwent 30-minute transient right middle cerebral artery occlusion (MCAO) and survived for 24 or 72h. Neurological scores were recorded after ischemia and prior to euthanasia, and brain tissue was sectioned for histology and immunolabeling. In a blinded fashion, Flag-HuR expressing nuclei were counted in peri-lesional regions of interest (ROI) and contralateral mirror ROIs, and ischemic/contralateral indices were calculated. Representative lesion size was determined in hematoxylin-eosin sections at the level of Bregma 1.10 mm. Results:HuR-Flag expression: The transgene was expressed in peri-lesional astrocytes. 24h after MCAO, hormonally intact female mice had higher levels of Flag-HuR expression: Flag-HuR index was 5.9 ± 1.9 in females (n = 7) vs. 2.0 ± 0.7 in males (n = 6), p = 0.002, Mann-Whitney rank sum test. 72h after MCAO, TG expression declined in females to levels comparable to those of males. Lesion size: There was no difference in lesion size between sex-matched TG and WT mice 24h post-MCAO, but at 72h lesion size was larger in TG females than WT females: 47% ± 12 (n = 10) vs. 22% ± 11 (n = 5), respectively, p = 0.002, t-test. Analysis of neurological scores, sex hormone levels, and long term survival is ongoing. Discussion: We hypothesized that altering mRNA stability in ischemic astrocytes would change outcome from cerebral ischemia. Initial characterization of TG mice in which HuR was expressed under control of the GFAP promoter showed that ischemia results in peri-lesional upregulation of the transgene, which is more robust in females than males 24h after MCAO and comparable to males 72h after MCAO. Transgene expression correlated with increased lesion size in females 72h after MCAO. While the mechanism of this effect requires elucidation, our results suggest that HuR is a viable novel target for further investigation in cerebral ischemia.


Stroke ◽  
2020 ◽  
Vol 51 (Suppl_1) ◽  
Author(s):  
Terrance Chiang ◽  
Sean Harvey ◽  
Arjun V Pendharkar ◽  
Michelle Y Cheng ◽  
Gary K Steinberg

Introduction: Manual scoring of behavior tests is commonly used for assessing motor deficits after stroke, however, it is labor intensive and subject to bias. These limitations lead to inconsistent assessment between research groups and non-reproducible data. In this study, we investigated the feasibility of an automated motor deficit assessment system, Erasmus ladder, in two ischemic stroke models. Methods: Distal middle cerebral artery occlusion (dMCAO n=10) or transient middle cerebral artery occlusion (tMCAO 30 minutes, n=15) were performed on male C57BL6J mice (11-13 weeks) to generate cortical ischemic stroke, with. Naïve mice (n=10) were used as controls. Immunohistochemistry was performed on brains collected at post-stroke day (PD) 30 to assess for infarct size (MAP2) and inflammation (CD68). Mice without infarct in both cortex and striatum were excluded from the study. Behavior was assessed using Erasmus ladder at pre-stroke baseline (4 unperturbed and 4 perturbed sessions) and on PD 7, 14, 21, and 28 (all perturbed sessions). Results: Erasmus ladder detected significant motor deficits in the tMCAO model, specifically in the pre- and post- perturbed times as well as several key step types (HH long). Analyses in the tMCAO model reveal changes in various step patterns and their capability to react to the perturbation (obstacle). These significant motor deficits after tMCAO were detectable until PD28. We also observed a sustained decline in the use of affected limb compared to unaffected limb until PD28. While this trend is also present in dMCAO model, motor deficits were detected in the dMCAO only at early timepoints (PD7) and the difference subsided by PD28. Conclusion: We have assessed the data collected by Erasmus ladder on mice that underwent two commonly used stroke models (tMCAO and dMCAO). Our data showed that Erasmus ladder can detect long term motor deficit including reduced use of affected limb, step pattern, and motor reaction to obstacle. This automated instrument is effective in detecting motor deficits in the tMCAO model and thus, can be used to evaluate treatments for enhancing recovery after stroke.


Stroke ◽  
2017 ◽  
Vol 48 (suppl_1) ◽  
Author(s):  
Anne-Katrin Giese ◽  
Patricia Musolino ◽  
Huichun Xu ◽  
Kathleen Ryan ◽  
Markus D Schirmer ◽  
...  

Introduction: Even though neuroinflammation is increasingly recognized as an essential contributor to ischemic brain injury, the exact underlying mechanisms remain unclear. Higher expression of the vascular cell adhesion molecule 1 (VCAM-1) increases leukocyte-brain endothelium interaction and has been associated with larger infarct size following acute ischemic stroke (AIS). The activation of the TGF-β signaling pathways can down-regulate VCAM-1 expression and ameliorate deleterious tissue outcome during neuroinflammation. Hypothesis: We sought to investigate whether genetic variation in the TGF-beta pathway and adhesion molecule genes is associated with acute stroke lesion size. Methods: We completed genome-wide association (GWA) testing and diffusion-weighted imaging lesion volume (DWIv) analysis in a discovery cohort of 532 AIS patients of European ancestry enrolled within 48 hours of symptom onset. An independent European ancestry cohort of 724 AIS patients with GWA data and automated DWIv served as replication cohort. GWA testing per SNP was performed using linear regression modeling of natural log-transformed DWIv adjusted for age, sex and relevant principal components. We selected 42 inflammatory genes in the TGF-beta pathway for a gene-based analysis using VEGAS (Versatile Gene-based -Association Study) software. A pre-specified discovery phase Bonferroni-corrected threshold was set at p<0.001. In the replication phase, 14 SNPs overlapping were tested at the Bonferroni-corrected p-value threshold of p<0.004. Results: Of all genes in the TGF-beta pathway, VCAM1 (p=0.0006) was significantly associated with DWIv in the discovery AIS cohort (age: 66 ± 14.9 years, sex: 63.4% male, DWIv: 2.2cm 3 (IQR: 0.6-11.7cm 3 )). A single SNP within the VCAM1 gene boundaries (rs3176876 (BETA=0.2341, p=0.003)) was significantly associated with DWIv in the replication AIS cohort (age: 65 ± 14.1 years, sex: 68.6% male, DWIv: 4cm 3 (IQR: 1.3-17.2cm 3 )). Conclusion: The genetic variant rs3176876 in the VCAM1 gene is associated with larger infarct lesion size measured on brain MRI of AIS patients. These findings suggest genetic contribution to the pro-inflammatory mechanisms in acute cerebral ischemia and warrant further investigation.


Sign in / Sign up

Export Citation Format

Share Document