scholarly journals A high-fat diet alters genome-wide DNA methylation and gene expression in SM/J mice

BMC Genomics ◽  
2018 ◽  
Vol 19 (1) ◽  
Author(s):  
Madeline Rose Keleher ◽  
Rabab Zaidi ◽  
Lauren Hicks ◽  
Shyam Shah ◽  
Xiaoyun Xing ◽  
...  
2017 ◽  
Vol 11 (2) ◽  
pp. 105 ◽  
Author(s):  
AhRam Yoon ◽  
Stephanie A. Tammen ◽  
Soyoung Park ◽  
Sung Nim Han ◽  
Sang-Woon Choi

PLoS ONE ◽  
2018 ◽  
Vol 13 (2) ◽  
pp. e0192606 ◽  
Author(s):  
Madeline Rose Keleher ◽  
Rabab Zaidi ◽  
Shyam Shah ◽  
M. Elsa Oakley ◽  
Cassondra Pavlatos ◽  
...  

2017 ◽  
Vol 2017 ◽  
pp. 1-17 ◽  
Author(s):  
Marlene Remely ◽  
Franziska Ferk ◽  
Sonja Sterneder ◽  
Tahereh Setayesh ◽  
Sylvia Roth ◽  
...  

Obesity as a multifactorial disorder involves low-grade inflammation, increased reactive oxygen species incidence, gut microbiota aberrations, and epigenetic consequences. Thus, prevention and therapies with epigenetic active antioxidants, (-)-Epigallocatechin-3-gallate (EGCG), are of increasing interest. DNA damage, DNA methylation and gene expression ofDNA methyltransferase 1,interleukin 6, andMutL homologue 1were analyzed in C57BL/6J male mice fed a high-fat diet (HFD) or a control diet (CD) with and without EGCG supplementation. Gut microbiota was analyzed with quantitative real-time polymerase chain reaction. An induction of DNA damage was observed, as a consequence of HFD-feeding, whereas EGCG supplementation decreased DNA damage. HFD-feeding induced a higher inflammatory status. Supplementation reversed these effects, resulting in tissue specific gene expression and methylation patterns ofDNA methyltransferase 1andMutL homologue 1. HFD feeding caused a significant lower bacterial abundance. TheFirmicutes/Bacteroidetesratio is significantly lower in HFD + EGCG but higher in CD + EGCG compared to control groups. The results demonstrate the impact of EGCG on the one hand on gut microbiota which together with dietary components affects host health. On the other hand effects may derive from antioxidative activities as well as epigenetic modifications observed on CpG methylation but also likely to include other epigenetic elements.


2018 ◽  
Vol 295 ◽  
pp. S190
Author(s):  
S. Rouschop ◽  
T. Karl ◽  
L. Maas ◽  
A. Risch ◽  
A. Opperhuizen ◽  
...  

PLoS ONE ◽  
2010 ◽  
Vol 5 (12) ◽  
pp. e14398 ◽  
Author(s):  
Catherine Gallou-Kabani ◽  
Anne Gabory ◽  
Jörg Tost ◽  
Mohsen Karimi ◽  
Sylvain Mayeur ◽  
...  

Animals ◽  
2020 ◽  
Vol 10 (12) ◽  
pp. 2213
Author(s):  
Jiahao Shao ◽  
Xue Bai ◽  
Ting Pan ◽  
Yanhong Li ◽  
Xianbo Jia ◽  
...  

DNA methylation is an epigenetic mechanism that plays an important role in gene regulation without an altered DNA sequence. Previous studies have demonstrated that diet affects obesity by partially mediating DNA methylation. Our study investigated the genome-wide DNA methylation of perirenal adipose tissue in rabbits to identify the epigenetic changes of high-fat diet-mediated obesity. Two libraries were constructed pooling DNA of rabbits fed a standard normal diet (SND) and DNA of rabbits fed a high-fat diet (HFD). Differentially methylated regions (DMRs) were identified using the option of the sliding window method, and online software DAVID Bioinformatics Resources 6.7 was used to perform Gene Ontology (GO) terms and KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway enrichment analysis of DMRs-associated genes. A total of 12,230 DMRs were obtained, of which 2305 (1207 up-regulated, 1098 down-regulated) and 601 (368 up-regulated, 233 down-regulated) of identified DMRs were observed in the gene body and promoter regions, respectively. GO analysis revealed that the DMRs-associated genes were involved in developmental process (GO:0032502), cell differentiation (GO:0030154), and lipid binding (GO:0008289), and KEGG pathway enrichment analysis revealed the DMRs-associated genes were enriched in linoleic acid metabolism (KO00591), DNA replication (KO03030), and MAPK signaling pathway (KO04010). Our study further elucidates the possible functions of DMRs-associated genes in rabbit adipogenesis, contributing to the understanding of HFD-mediated obesity.


2016 ◽  
Vol 27 ◽  
pp. 79-95 ◽  
Author(s):  
Lovisa Heyman-Lindén ◽  
Yoshinori Seki ◽  
Petter Storm ◽  
Helena A. Jones ◽  
Maureen J. Charron ◽  
...  

PLoS ONE ◽  
2011 ◽  
Vol 6 (7) ◽  
pp. e21662 ◽  
Author(s):  
Kevin J. Dudley ◽  
Deborah M. Sloboda ◽  
Kristin L. Connor ◽  
Jacques Beltrand ◽  
Mark H. Vickers

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