scholarly journals CRISPR/Cas9 mediated high efficiency knockout of the eye color gene Vermillion in Helicoverpa zea (Boddie)

PLoS ONE ◽  
2018 ◽  
Vol 13 (5) ◽  
pp. e0197567 ◽  
Author(s):  
Omaththage P. Perera ◽  
Nathan S. Little ◽  
Calvin A. Pierce
Genetics ◽  
1998 ◽  
Vol 150 (1) ◽  
pp. 251-263 ◽  
Author(s):  
Utpal Bhadra ◽  
Manika Pal Bhadra ◽  
James A Birchler

Abstract We have investigated the effect of dosage-dependent trans-acting regulators of the white eye color gene in combinations to understand their interaction properties. The consequences of the interactions will aid in an understanding of aneuploid syndromes, position-effect variegation (PEV), quantitative traits, and dosage compensation, all of which are affected by dosage-dependent modifiers. Various combinations modulate two functionally related transcripts, white and scarlet, differently. The overall trend is that multiple modifiers are noncumulative or epistatic to each other. In some combinations, developmental transitions from larvae to pupae to adults act as a switch for whether the effect is positive or negative. With position-effect variegation, similar responses were found as with gene expression. The highly multigenic nature of dosage-sensitive modulation of both gene expression and PEV suggests that dosage effects can be progressively transduced through a series of steps in a hierarchical manner.


1998 ◽  
Vol 260 (2-3) ◽  
pp. 131-143 ◽  
Author(s):  
E. V. Benevolenskaya ◽  
M. V. Frolov ◽  
J. A. Birchler

Genetics ◽  
1996 ◽  
Vol 144 (2) ◽  
pp. 715-726 ◽  
Author(s):  
Mark L Siegal ◽  
Daniel L Hartl

Abstract Studies of gene function and regulation in transgenic Drosophila are often compromised by the possibility of genomic position effects on gene expression. We have developed a method, called transgene coplacement, in which any two sequences can be positioned at exactly the same site and orientation in the genome. Transgene coplacement makes use of the bacteriophage P1 system of Cre/loxP site-specific recombination, which we have introduced into Drosophila. In the presence of a cre transgene driven by a dual hsp70-Mosl promoter, a white reporter gene flanked by loxP sites is excised with virtually 100% efficiency both in somatic cells and in germ cells. A strong maternal effect, resulting from Cre recombinase present in the oocyte, is observed as white or mosaic eye color in F1 progeny. Excision in germ cells of the F1 yields a strong grand-maternal effect, observed as a highly skewed ratio of eye-color phenotypes in the F2 generation. The excision reactions of Cre/loxP and the related FLP/FRT system are used to create Drosophila lines in which transgenes are at exactly allelic sites in homologous chromosomes.


1982 ◽  
Vol 73 (1) ◽  
pp. 80-80 ◽  
Author(s):  
Ademilson Espencer Egea Soares ◽  
José Chaud Netto
Keyword(s):  

Genetics ◽  
1994 ◽  
Vol 137 (4) ◽  
pp. 1057-1070 ◽  
Author(s):  
J A Birchler ◽  
U Bhadra ◽  
L Rabinow ◽  
R Linsk ◽  
A T Nguyen-Huynh

Abstract A locus is described in Drosophila melanogaster that modifies the expression of the white eye color gene. This trans-acting modifier reduces the expression of the white gene in the eye, but elevates the expression in other adult tissues. Because of the eye phenotype in which the expression of white is lessened but not eliminated, the newly described locus is called the Weakener of white (Wow). Northern analysis reveals that Wow can exert an inverse or direct modifying effect depending upon the developmental stage. Two related genes, brown and scarlet, that are coordinately expressed with white, are also affected by Wow. In addition, Wow modulates the steady state RNA level of the retrotransposon, copia. When tested with a white promoter-Alcohol dehydrogenase reporter. Wow confers the modifying effect to the reporter, suggesting a requirement of the white regulatory sequences for mediating the response. In addition to being a dosage sensitive regulator of white, brown, scarlet and copia, Wow acts as a suppressor of position effect variegation. There are many dosage sensitive suppressors of position effect variegation and many dosage-sensitive modifiers of gene expression. The Wow mutations provide evidence for an overlap between the two types of modifiers.


1996 ◽  
Vol 26 (7) ◽  
pp. 641-644 ◽  
Author(s):  
Lisa D. White ◽  
Craig J. Coates ◽  
Peter W. Atkinson ◽  
David A. O'Brochta
Keyword(s):  

2020 ◽  
Author(s):  
Chengfeng Xiao ◽  
Shuang Qiu

AbstractThe classic eye-color gene white+ (w+) in Drosophila melanogaster (fruitfly) has unexpected behavioral consequences. How w+ affect locomotion of adult flies is largely unknown. Here, we show that w+ selectively suppresses locomotor components at relatively high frequencies (> 0.1 Hz). The wildtype Canton-S male flies walked intermittently in circular arenas while the white-eyed w1118 flies walked continuously. Through careful control of genetic and cytoplasmic backgrounds, we found that w+ was associated with intermittent walking. w+-carrying male flies had smaller median values of path length per second (PPS) and reduced 5-min path length compared with w1118-carrying males. Additionally, flies carrying 2-4 genomic copies of mini-white+ (mw+) showed reduced median PPSs and decreased 5-min path length compared with w1118 flies, and the suppression was dependent on the copy number of mw+. Fourier transform of the time series (i.e. PPSs over time) indicated that w+/mw+ specifically suppressed the locomotor components at relatively high frequencies (> 0.1 Hz). Lastly, the downregulation of w+ in neurons but not glial cells resulted in an increased percentage of high-frequency locomotor components. We concluded that w+ suppressed the locomotion of adult flies by selectively reducing the high-frequency locomotor components.


Author(s):  
M. N. Shapturenko ◽  
A. V. Kondratiuk ◽  
S. I. Vakula ◽  
M. V. Seredenko (Shinkevich) ◽  
I. G. Gudzievskaya ◽  
...  

The human genetic phenotyping is one of the most intensely developing area of forensic genetics. Externally visible traits, including eye color, can be predicted by analyzing single nucleotide polymorphisms with a high predictive rate. We studied the polymorphisms rs12913832 and rs1800407 in the HERC2 and OCA2 genes, respectively, to evaluate its prognostic availability in relation to the iris pigmentation of the Belarusian population. For this, both eye images and DNA samples were collected from 314 individuals to analyze the key polymorphisms by the TaqMan assay. Our data confirmed a relevance of rs12913832:A>G and rs1800407:G>A in the prediction context. The highest values of the sensitivity (SE = 0.94) and the specificity (SP = 0.90) were obtained for rs12913832, demonstrating the high efficiency of this marker as a classifier of phenotypic groups. The presence of the ancestral dominant allele rs12913832-A causes a dark (brown) iris pigmentation, how- ever, the heterozygous state rs12913832:GA includes a range of mixed variants. The predictive value of rs1800407 for the genetic phenotyping is highly significant (SE = 0.98), but has a low specificity (SP = 0.14), thus rs1800407, not being an effective classifier, can be used as an auxiliary in the eye color predictive model. The analysis of a cumulative impact of the both poly- morphisms on the iris color variation shows their high prospects for the genetic phenotyping of the Belarusian population.


2018 ◽  
Vol 92 ◽  
pp. 65-72 ◽  
Author(s):  
Haokun Zhang ◽  
Takashi Kiuchi ◽  
Chikara Hirayama ◽  
Susumu Katsuma ◽  
Toru Shimada

Genetics ◽  
1991 ◽  
Vol 128 (2) ◽  
pp. 303-310 ◽  
Author(s):  
D Garza ◽  
M Medhora ◽  
A Koga ◽  
D L Hartl

Abstract A chimeric white gene (wpch) and other constructs containing the transposable element mariner from Drosophila mauritiana were introduced into the germline of Drosophila melanogaster using transformation mediated by the P element. In the absence of other mariner elements, the wpch allele is genetically stable in both germ cells and somatic cells, indicating that the peach element (i.e., the particular copy of mariner inserted in the wpch allele) is inactive. However, in the presence of the active element Mos1, the wpch allele reverts, owing to excision of the peach element, yielding eye-color mosaics and a high rate of germline reversion. In strains containing Mos1 virtually every fly is an eye-color mosaic, and the rate of wpch germline reversion ranges from 10 to 25%, depending on temperature. The overall rates of mariner excision and transposition are approximately sixfold greater than the rates in comparable strains of Drosophila simulans. The activity of the Mos1 element is markedly affected by position effects at the site of Mos1 insertion. In low level mosiac lines, dosage effects of Mos1 are apparent in the heavier level of eye-color mosaicism in Mos1 homozygotes than in heterozygotes. However, saturation occurs in high level mosaic lines, and then dosage effects are not observed. A pBluescribe M13+ plasmid containing Mos1 was injected into the pole plasm of D. melanogaster embryos, and the Mos1 element spontaneously integrated into the germline at high efficiency. These transformed strains of D. melanogaster presently contain numerous copies of mariner and may be useful in transposon tagging and other applications.


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