scholarly journals AKTIVITAS INULINASE OLEH Pichia manshurica DAN FUSAN F4 PADA FERMENTASI BATCH DENGAN UMBI DAHLIA (Dahlia sp) SEBAGAI SUBSTRAT

REAKTOR ◽  
2015 ◽  
Vol 14 (3) ◽  
pp. 187 ◽  
Author(s):  
Wijanarka Wijanarka ◽  
Endang Sutariningsih Soetarto ◽  
Kumala Dewi ◽  
Ari Indrianto

ACTIVITY OF INULINASE OF Pichia Manshuria AND FUSAN F4 ON BATCH FERMENTATION UDING DAHLIA TUBER (Dahlia sp) AS A SUBSTRATE. A dahlia tuber is one of the common inulin rich crops. Inulin is formed by units of fructans, which are polymers of D-fructose. Inulinases (EC 3.2.1.7) catalyze the hydrolysis of inulin, producing fructooligosaccharides (FOS), inulooligosaccharides (IOS), pulullan, acetone, butanol and sorbitol, therefore dahlia tubers are used as growth media. The inulin hydrolyzing activity has been reported from various microbial strains Pichia manshurica and Fusan F4 which is the result of fusion protoplast. The objective of this study was to determine the activity of inulinase Pichia manshurica and Fusan F4 on the substrate dahlia tubers. Fusan F4 to increase inulinase activity compared with Pichia manshurica and to investigate the kinetics of specific growth rate (μ) and time double (g) from of Pichia manshurica and Fusan F4. The results showed that the exponential phase occurs at 0-12 hour without a lag phase. P. manshurica has a specific growth rate (μ) of 0.18/hour with time double (g) 3.90 hours and the inulinase enzyme activity of 0.56 IU, while for Fusan F4 consecutive has a value μ of 0.20/hour, g of 3.49 hours and the activity of 0.69 IU. The conclusion of this research is to improve Fusan F4 inulinase activity and the ability has to be better than the Pichia manshurica.Umbi dahlia merupakan salah satu umbi yang mengandung inulin. Inulin merupakan polimer fruktan yang dapat dipecah oleh enzim inulinase (E.C. 3.2.1.7) menjadi fruktosa. Fruktosa merupakan bahan baku dasar untuk pembuatan FOS, IOS, pulullan, aseton dan sorbitol, oleh karena itu umbi dahlia digunakan sebagai media pertumbuhan. Enzim inulinase ini secara indigenous dimiliki oleh Pichia manshurica dan Fusan F4 yang merupakan hasil fusi protoplas.Tujuan  penelitian ini adalah  untuk mengetahui aktivitas inulinase Pichia manshurica dan Fusan F4 pada substrat umbi dahlia, Fusan F4 mampu meningkatkan aktivitas inulinase dibandingkan dengan Pichia manshurica serta untuk mengetahui kinetika kecepatan pertumbuhan specifik (µ) dan waktu generasi (g) Pichia manshurica dan Fusan F4. Hasil penelitian menunjukkan bahwa fase  eksponensial terjadi pada jam ke-0 sampai jam ke-12 tanpa diikuti fase lag, Pichia manshurica mempunyai kecepatan pertumbuhan specific (µ)  sebesar 0,18/jam dengan waktu generasi (g) 3,90 jam dan aktivitas enzim inulinase yang dihasilkan sebesar 0,56 IU, sedangkan untuk fusan F4 secara berturut-turut mempunyai nilai µ sebesar 0,20/jam, g sebesar 3,49 jam dan aktivitas sebesar 0,69 IU. Kesimpulan dari penelitian ini adalah Fusan F4 mampu meningkatkan aktivitas inulinase dan mempunyai kemampuan lebih baik dibanding dengan Pichia manshurica.

1990 ◽  
Vol 36 (7) ◽  
pp. 475-483 ◽  
Author(s):  
Cecilia Eriksson ◽  
Carlos Pedrós-Alió

The influence of selenite on the growth of bacterioplankton present in samples of three lakes was analyzed; these samples were collected in sulfate-rich, oligotrophic Lake Banyoles, moderately eutrophic Lake Erken, and hypereutrophic Lake Vallentunasjön. Experiments were set up in a completely randomized factorial design to analyze the effect of selenite alone and, in the same experiment, the effect of selenite in the presence of phosphate. Cultures of bacterioplankton, free of algae and zooplankton, diluted with filtered natural water, were used in the bioassays. The addition of 100 μg P∙L−1 to samples from Lake Banyoles, collected during the winter, enhanced cell yield 2.7 times; the addition of 10 μg P∙L−1 to samples from Lake Erken, collected during the spring, doubled the yield. Strong effects of phosphate on growth rates were found in samples from lakes Banyoles and Vallentunasjön. When bacteria from Lake Banyoles were exposed to 100 μg P∙L−1, the specific growth rate was 0.08 h−1 (log units), compared with 0.03 h−1 in the control. In spring, Lake Vallentunasjôn contained water with a considerable amount of dissolved organic phosphorus (18 μg P∙L−1); the addition of 100 μg P∙L−1, in the form of phosphate, resulted in a shorter lag phase of at least 48 h and reduced the specific growth rate to about half that in the control. Selenite had a significant positive effect on cell yield in samples from lakes Banyoles (p = 0.0001) and Vallentunasjön (p = 0.020), whereas the effect on cell yield in samples from Lake Erken was slightly negative (p = 0.110). The addition of selenite alone (550 ng Se∙L−1) to samples from Lake Banyoles, collected during the summer, doubled the biovolume of bacterioplankton within 37 h. Among winter bacteria from Lake Banyoles, selenite, at concentrations of 55 and 550 ng Se∙L−1, increased the number of bacteria twofold and threefold, respectively, but only when the phosphate level was high (100 μg P∙L−1). A high inorganic phosphorus level of 100 μg P∙L−1 was also necessary to stimulate the effect of selenite on bacterial growth in samples from Lake Vallentunasjön; 550 ng Se∙L−1 enhanced cell yield 24%. The negative effect of selenite on samples from Lake Erken was most obvious when phosphate (10 or 100 μg P∙L−1) had been added simultaneously (p = 0.030 for selenium and phosphorus interaction). Cell yields were always greater at the highest temperature. With samples from Lake Vallentunasjön, selenite stimulated bacterial growth at 25 °C but had no effect at 10 °C. With samples from Lake Banyoles, the simultaneous addition of phosphate and selenite increased cell yield threefold at 15 °C and only twofold at 30 °C. Key words: phosphorus, sulfate, Lake Erken, Lake Vallentunasjön, Lake Banyoles.


2019 ◽  
pp. 12-16
Author(s):  
M. S. Firsova ◽  
V. A. Yevgrafova ◽  
A. V. Potekhin

Different liquid nutrient media supplemented with growth factors intended for Avibacterium paragallinarum strain No. 5111 cultivation were com­pared. The highest specific growth rate (μ = 0.787 ± 0.041 h-1) and the maximal accumulation of the agent’s biomass (Х = 9.52 ± 0.04 lg CFU/ cm3) were reported when cultured in casein soybean broth. Herewith, the mean time of the live microbial cell concentration doubling was minimal (td = 0.88 h), and the exponential growth phase lasted for 6 hours. The optimal method for Avibacterium paragallinarum cultivation in casein soy­bean broth in laboratory bioreactor Biotron LiFlus GX was determined through the measurements and adjustment of basic physical and chemical parameters. The time period until the culture reached the stationary growth phase was maximal with aeration at 1.0 l/min; herewith, the O2 partial pressure in the nutrient medium did not exceed 25%. The period of the intense decrease of medium’s pH was accompanied with the exponential phase of the bacterial growth. The nutrient medium’s pH ranging from 7.30 ± 0.02 to 7.90 ± 0.06 had no significant impact on the specific growth rate of the strain and the lag phase duration was minimal – 0.36–0.45 h. The strain cultivation in the nutrient medium with pH 7.90 ± 0.06 demonstrated maximal aggregation of the bacteria (9.76 ± 0.04 lg CFU/cm3). 40% glucose solution added at 0.6-0.8 g/l during cultivation facilitated the decrease of the suspension’s pH. Minimal redox value (–75 mV) was indicative of the completion of the exponential phase of the strain growth.  


2019 ◽  
Vol 18 (1) ◽  
Author(s):  
Javier Garrigós-Martínez ◽  
Miguel Angel Nieto-Taype ◽  
Arnau Gasset-Franch ◽  
José Luis Montesinos-Seguí ◽  
Xavier Garcia-Ortega ◽  
...  

Abstract Background The PAOX1-based expression system is the most widely used for producing recombinant proteins in the methylotrophic yeast Pichia pastoris (Komagataella phaffii). Despite relevant recent advances in regulation of the methanol utilization (MUT) pathway have been made, the role of specific growth rate (µ) in AOX1 regulation remains unknown, and therefore, its impact on protein production kinetics is still unclear. Results The influence of heterologous gene dosage, and both, operational mode and strategy, on culture physiological state was studied by cultivating the two PAOX1-driven Candida rugosa lipase 1 (Crl1) producer clones. Specifically, a clone integrating a single expression cassette of CRL1 was compared with one containing three cassettes over broad dilution rate and µ ranges in both chemostat and fed-batch cultivations. Chemostat cultivations allowed to establish the impact of µ on the MUT-related MIT1 pool which leads to a bell-shaped relationship between µ and PAOX1-driven gene expression, influencing directly Crl1 production kinetics. Also, chemostat and fed-batch cultivations exposed the favorable effects of increasing the CRL1 gene dosage (up to 2.4 fold in qp) on Crl1 production with no significant detrimental effects on physiological capabilities. Conclusions PAOX1-driven gene expression and Crl1 production kinetics in P. pastoris were successfully correlated with µ. In fact, µ governs MUT-related MIT1 amount that triggers PAOX1-driven gene expression—heterologous genes included—, thus directly influencing the production kinetics of recombinant protein.


REAKTOR ◽  
2017 ◽  
Vol 17 (2) ◽  
pp. 81 ◽  
Author(s):  
Marissa Widiyanti ◽  
Andri Cahyo Kumoro

Abstract THE KINETICS OF GADUNG (Dioscorea hispida dennst.) TUBER DETOXIFICATION VIA FUNGAL FERMENTATION USING Mucor racemosus. Bitter yam (Dioscorea hispida Dennst.) is one of carbohydrate sources used as staple food commonly found in Indonesian dry-land. However, this tuber has been underutilized due to the presence of an antinutrition compound, namely cyanogenic glucosides. Removal of cyanides from foodstuffs can be done either by physical, chemical or biological methods. In this study, the effect of time on the detoxification of gadung tuber chips from cyanides via fermentation using Mucor racemosus and its kinetics were investigated. Gadung chip samples were withdrawn from the fermentation system at every 24 hours interval for biomass and cyanides contents analysis. It was clear that the cyanides content decreased as the fermentation went by. Safely consumed gadung tuber chips were obtained from fermentation of the chips for 120 hours from which cyanides content as low as 49.41 mg/kg was achieved. The logistic equation successfully described the growth rate of Mucor racemosus under studied condition. The specific growth rate of Mucor racemosus in gadung chips was found to be 0.0297/hr or about a half of specific growth rate of that mold when grown in the readily consumed yeast-pepton-glucose (YPG) media. Keywords: fermentation; yam; monod; Mucor racemosus; cyanogen  Abstrak Umbi gadung (Dioscorea hispida Dennst.) merupakan salah satu sumber karbohidrat yang digunakan sebagai makanan pokok yang biasa ditemukan di lahan kering di wilayah Indonesia. Namun, umbi ini kurang dimanfaatkan karena adanya senyawa antinutrisi, yaitu cyanogenic glucosides. Penghilangan senyawa sianida dari bahan makanan dapat dilakukan baik dengan metode fisik, kimia atau biologi. Penelitian ini bertujuan untuk mengkaji pengaruh waktu pada detoksifikasi irisan umbi gadung dari senyawa sianida melalui fermentasi dengan menggunakan kapang Mucor racemosus dan kinetikanya. Cuplikan irisan umbi gadung diambil dari sistem fermentasi pada setiap jeda waktu 24 jam untuk dianalisis kadar biomassa dan sianidanya. Hasil penelitian menunjukkan bahwa kandungan sianida menurun seiring dengan bertambahnya waktu fermentasi. Irisan umbi gadung yang aman dikonsumsi dapat diperoleh dari fermentasi irisan ubi gadung selama 120 jam dengan kandungan sianida serendah 49,41 mg/kg. Persamaan logistik berhasil menggambarkan tingkat pertumbuhan kapang Mucor racemosus dengan baik. Tingkat pertumbuhan spesifik dari Mucor racemosus pada irisan umbi gadung adalah 0,0297/jam atau sekitar setengah dari laju pertumbuhan spesifik jamur tersebut saat dibudidayakan pada media yang siap dikonsumsi, seperti ragi-pepton-glukosa (YPG). Kata kunci: fermentasi; gadung; monod; Mucor racemosus; sianogen 


2010 ◽  
Vol 76 (16) ◽  
pp. 5423-5431 ◽  
Author(s):  
Alexander C. Hayes ◽  
Steven N. Liss ◽  
D. Grant Allen

ABSTRACT The growth kinetics of Hyphomicrobium spp. and Thiobacillus spp. on dimethyl sulfide (DMS) and methanol (in the case of Hyphomicrobium spp.) in an enrichment culture created from a biofilter cotreating DMS and methanol were studied. Specific growth rates of 0.099 h−1 and 0.11 h−1 were determined for Hyphomicrobium spp. and Thiobacillus spp., respectively, growing on DMS at pH 7. These specific growth rates are double the highest maximum specific growth rate for bacterial growth on DMS reported to date in the literature. When the pH of the medium was decreased from pH 7 to pH 5, the specific growth rate of Hyphomicrobium spp. decreased by 85%, with a near 100-fold decline in the yield of Hyphomicrobium 16S rRNA gene copies in the mixed culture. Through the same pH shift, the specific growth rate and 16S rRNA gene yield of Thiobacillus spp. remained similar. When methanol was used as a substrate, the specific growth rate of Hyphomicrobium spp. declined much less over the same pH range (up to 30%) while the yield of 16S rRNA gene copies declined by only 50%. Switching from an NH4 +-N-based source to a NO3 −-N-based source resulted in the same trends for the specific growth rate of these microorganisms with respect to pH. This suggests that pH has far more impact on the growth kinetics of these microorganisms than the nitrogen source. The results of these mixed-culture batch experiments indicate that the increased DMS removal rates observed in previous studies of biofilters cotreating DMS and methanol are due to the proliferation of DMS-degrading Hyphomicrobium spp. on methanol at pH levels not conducive to high growth rates on DMS alone.


1964 ◽  
Vol 10 (3) ◽  
pp. 407-444 ◽  
Author(s):  
A. Borrow ◽  
Sheila Brown ◽  
E. G. Jefferys ◽  
R. H. J. Kessell ◽  
Eithne C. Lloyd ◽  
...  

Some aspects are described of the kinetics of the growth of Gibberella fujikuroi in nitrogen-limited media containing either ammonium nitrate, ammonium acetate, ammonium tartrate, urea, or glycine. Also varied were inoculum size, agitation rate, pH, and initial concentrations of glucose and nitrogen source. The significance of kinetic parameters used in this, and published studies, is discussed.A lag phase was only found on ammonium acetate media or when high concentrations of glucose were present. Early growth was exponential on all nitrogen sources. On ammonium acetate the specific growth rate decreased at a dry weight of ca. 1 mg/g WS (Whole unfiltered Sample). On ammonium nitrate, early exponential growth utilized more NH3-nitrogen than NO3-nitrogen with a concomitant decrease in pH. In the range pH 3.0–2.8 NH3-nitrogen uptake and dry weight increase ceased, but NO3-nitrogen uptake continued, and the pH increased until growth and NH3-nitrogen uptake restarted. This pattern could be repeated. Finally, exponential growth was resumed at a low specific growth rate. On glycine, urea, and ammonium tartrate media, exponential growth continued to a dry weight of about 7 mg/g WS. During this period the uptakes relative to dry weight (contributions) of glucose, nitrogen, phosphate, and magnesium remained constant and were unaffected by the rate of agitation, as also was the specific growth rate, but the latter decreased with increasing glucose concentration.A period of linear growth could follow the exponential period. The contribution of glucose was greater, and that of phosphate and magnesium less, than during exponential growth. The dry weight at which exponential growth changed to linear growth was greater the higher the rate of agitation, and this change may be a response to oxygen restriction.After nitrogen exhaustion, fat and carbohydrate accumulation in the cells largely accounted for the increase in dry weight. The specific rates of dry weight increase and glucose uptake remained constant over the lower range of initial nitrogen concentrations. Both rates decreased with increasing nitrogen over the higher range.Gibberellic acid production began at, or soon after, nitrogen exhaustion. The amount present increased linearly with time. The productivity decreased with increasing glucose concentration, and first increased and then decreased with increasing initial nitrogen. The maximum amount produced was proportional to the initial nitrogen provided. Some published results are discussed in the light of these relations.


1999 ◽  
Vol 46 (1) ◽  
pp. 72-80 ◽  
Author(s):  
Urs Lendenmann ◽  
Mario Snozzi ◽  
Thomas Egli

Kinetic models for microbial growth describe the specific growth rate (μ) as a function of the concentration of the growth-limiting nutrient (s) and a set of parameters. A typical example is the model proposed by Monod, where μ is related to s using substrate affinity (Ks) and the maximum specific growth rate (μmax). The preferred method to determine such parameters is to grow microorganisms in continuous culture and to measure the concentration of the growth-limiting substrate as a function of the dilution rate. However, owing to the lack of analytical methods to quantify sugars in the microgram per litre range, it has not been possible to investigate the growth kinetics of Escherichia coli in chemostat culture. Using an HPLC method able to determine steady-state concentrations of reducing sugars, we previously have shown that the Monod model adequately describes glucose-limited growth of E. coli ML30. This has not been confirmed for any other sugar. Therefore, we carried out a similar study with galactose and found steady-state concentrations between 18 and 840 μg·L-1 for dilution rates between 0.2 and 0.8·h-1, respectively. With these data the parameters of several models giving the specific growth rate as a function of the substrate concentration were estimated by nonlinear parameter estimation, and subsequently, the models were evaluated statistically. From all equations tested, the Monod model described the data best. The parameters for galactose utilisation were μmax = 0.75·h-1 and Ks = 67 μg·L-1. The results indicated that accurate Ks values can be estimated from a limited set of steady-state data when employing μmax measured during balanced growth in batch culture. This simplified procedure was applied for maltose, ribose, and fructose. For growth of E. coli with these sugars, μmax and Ks were for maltose 0.87·h-1, 100 μg·L-1; for ribose 0.57·h-1, 132 μg·L-1, and for fructose 0.70·h-1, 125 μg·L-1. Key words: monod model, continuous culture, galactose, glucose, fructose, maltose, ribose.


2014 ◽  
Vol 16 (2) ◽  
pp. 114
Author(s):  
Wijanarka Wijanarka ◽  
Endang Sutariningsih Soetarto ◽  
Kumala Dewi ◽  
Ari Indrianto

Fusan F1 was the result of the fusion of the Pichia manshurica and Rhodosporidium paludigenum. The second type of yeast has the ability to produce inulinase.  Inulinase (EC. 3.2.1.7) is an enzyme that is classified as a hydrolase enzyme, this enzyme has the ability to break down complex inulin into simpler components that fructose. Fructose was a monosaccharide with huge potential for the manufacture of butanol, iOS, pullan, FOS and ethanol. The purpose of research to determine the ability fusan F1 in producing inulinase and to determine the specific growth rate (μ), as well as the generation time (g) fusan F1.The results showed that fusan F1 at the 18 thhour was able to produce inulinase of 0.61 mol / min. These results are higher than the parental namely P. manshurica (0.56 mol / min) and Rh. paludigenum (0.33 mol / min). While The specific growth rate (μ) and generation time (g) fusan F1 respecly 0.25 h and 2.7/ h. Keywords: Fusan F1; inulinase; the specific growth; generation time


2011 ◽  
Vol 21 (No. 2) ◽  
pp. 43-49 ◽  
Author(s):  
D. Lauková ◽  
Ľ. Valík ◽  
F. Görner

The growth dynamics of the oxidative imperfect yeast strain Candida maltosa YP1 isolated from the surface of fruit yoghurt was studied in relation to the lactic acid concentration ranging from 0 to 1.6% (w/v). The maximal specific growth rate of 0.36 h<sup>&ndash;1</sup> and minimal lag-phase duration of 2.9 h were found in the glucose solution without lactic acid at 25&deg;C. The decrease of the natural logarithm of both the specific growth rate (ln &micro;) and the lag-phase prolongation (ln ) in the dependence on the increase of lactic acid concentration (0&ndash;1.59%) was significantly linear (ln&nbsp;&micro; = &ndash;1.1458 &ndash; 0.6056 c; R<sup>2</sup><sub>(&micro;) </sub>= 0.9526; ln l = 1.0141 + 1.9766 c; R<sup>2</sup><sub>() </sub>= 0.9577). Based on these equations, the prediction of the time necessary for C. maltosa YP1 to reach 1 &times; 10<sup>6</sup> CFU/ml in the dependance on lactic acid concentration and, the initial density of the yeast culture was calculated. For example, C. maltosa YP1 was able to reach the level of 1 &times; 10<sup>6</sup> CFU/ml in a model glucose solution at the initial concentration N<sub>0</sub> = 1 CFU/ml, 0.9% lactic acid and 25&deg;C within 2 d. The growth predictions presented indicate a considerable resistance of C. maltosa YP1 to lactic acid in the concentration of up to 1.3% (w/v). &nbsp;


Sign in / Sign up

Export Citation Format

Share Document