scholarly journals Isolation and characterization of a crude oil degrading bacteria from formation water: comparative genomic analysis of environmental Ochrobactrum intermedium isolate versus clinical strains

2015 ◽  
Vol 16 (10) ◽  
pp. 865-874 ◽  
Author(s):  
Lu-jun Chai ◽  
Xia-wei Jiang ◽  
Fan Zhang ◽  
Bei-wen Zheng ◽  
Fu-chang Shu ◽  
...  
Keyword(s):  
Crude Oil ◽  
Genomic Analysis ◽  
Comparative Genomic Analysis ◽  
Comparative Genomic ◽  
Formation Water ◽  
Clinical Strains ◽  
Isolation And Characterization ◽  
Degrading Bacteria ◽  
Ochrobactrum Intermedium

Isolation and Characterization of Biosurfactant Producing and Crude Oil Degrading Bacteria from Oil Contaminated Soils

2017 ◽  
Vol 42 (3) ◽  
pp. 1149-1156 ◽  
Author(s):  
Ali Ebadi ◽  
Mohsen Olamaee ◽  
Nayer Azam Khoshkholgh Sima ◽  
Reza Ghorbani Nasrabadi ◽  
Maryam Hashemi
Keyword(s):  
Crude Oil ◽  
Contaminated Soils ◽  
Isolation And Characterization ◽  
Degrading Bacteria

scholarly journals Isolation and characterization of diethyl phthalate degrading bacteria from crude oil contaminated soil

2019 ◽  
Vol 40 (3) ◽  
pp. 275-282
Author(s):  
P.K. Çevik ◽  
◽  
A.B. Eroğlu ◽  
G. Yildizli ◽  
D. Coşan ◽  
...  
Keyword(s):  
Crude Oil ◽  
Contaminated Soil ◽  
Diethyl Phthalate ◽  
Isolation And Characterization ◽  
Degrading Bacteria

scholarly journals Comparative genomic analysis and characterization of Staphylococcus sp. AOAB, isolated from a notoriously invasive Mnemiopsis leidyi gut revealed multiple antibiotic resistance determinants

2021 ◽  
Author(s):  
Richard M. Mariita ◽  
Mohammad J. Hossain ◽  
Anthony G. Moss
Keyword(s):  
Sequence Similarity ◽  
Genomic Analysis ◽  
Mnemiopsis Leidyi ◽  
Comparative Genomic ◽  
Marker Genes ◽  
Respiratory Quinone ◽  
Polar Lipid Profile ◽  
Isolation And Characterization ◽  
Taxonomic Approach

AbstractHere, we describe the isolation and characterization of a coagulase-negative, vancomycin and oxacillin-susceptible novel bacterium of the genus Staphylococcus. Staphylococcus sp. strain AOAB was isolated from the stomodeum (gut) of the Mnemiopsis leidyi from Mobile Bay, Alabama USA. A polyphasic taxonomic approach comprised of phenotypic, chemotaxonomic and genotypic characteristics was used for analysis. The dominant respiratory quinone detected was MK-7 (100%). Major cellular fatty acids were anteiso-C15:0 (40.52%), anteiso-C17:0 (13.04 %), C-18:0 (11.53%) and C-20:0 (10.45%). The polar lipid profile consisted of glycolipid, phospholipid, phosphatidylglycerol and diphosphatidylglycerol. Although strain AOAB had a 16SrRNA gene sequence similarity of 99% with S. warneri SG1, S. pasteuri, S. devriesei KS-SP_60, S. lugdunensis HKU09-01, S. epidermidis RP62A, S. haemolyticus JCSC1435 and S. hominis DM 122, it was be distinguished from those species based on Multi-Locus Sequence Analysis (MLSA) using 6 marker genes (16S rRNA, hsp60, rpoB, dnaJ, sodA and tuf). MLSA revealed strain AOAB to be closely related to S. warneri SG1 and S. pasteuri SP1 but distinct from two hitherto known species. These results were confirmed by Average Nucleotide Identity (closest ANI of 84.93% and 84.58% identity against S. warneri SG1 and S. pasteuri SP1 respectively). In-silico DNA-DNA hybridization was <70% (33.1 % and 32.8% against S. warneri SG1 and S. pasteuri SP1 respectively), which further confirmed that the strain was a potential novel Staphylococcus species.

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