Single nucleotide polymorphisms in Heat Shock Protein (HSP) 90AA1 gene and their association with heat tolerance traits in Sahiwal cows

2015 ◽  
Author(s):  
Rakesh Kumar ◽  
I. D. Gupta ◽  
Archana Verma ◽  
Nishant Verma ◽  
M. R. Vineeth
Keyword(s):  
Heat Stress ◽  
Heat Shock ◽  
Heat Tolerance ◽  
Bos Taurus ◽  
Comparative Sequence Analysis ◽  
Production Performance ◽  
Nucleotide Polymorphisms ◽  
Sahiwal Cows ◽  
Shock Proteins ◽  
Hsp Genes

Heat Shock Proteins (HSPs) are group of proteins which are synthesized during heat stress. HSP genes have been reported to be associated with heat tolerance and production performance in cattle. HSP90AA1 gene has been mapped on Bos taurus autosome 21 (BTA 21) and spans nearly 5368 bp comprising 11 exons out of which first exon does not translate. The present study was carried out in Sahiwal cows (n=100) with the objectives to identify SNPs in targeted regions (exon 3, 7, 8 & 11) of HSP90AA1 gene and to analyze their association with heat tolerance traits in Sahiwal cows. Respiration rate (RR) and rectal temperature (RT) was recorded once during probable extreme hours in winter, spring and summer season. Further, heat tolerance coefficient (HTC) also calculated to see the adaptability of the animals during the period of heat stress. On the basis of comparative sequence analysis, total five SNPs were revealed at position of A1209G, A3292C, T4935C, T5218C and A5224C in the targeted region of HSP90AA1 gene. Out of these, only two SNPs at A1209G and A3292C loci were found significantly associated with heat tolerance traits in Sahiwal cows. Whereas, THI has a highly significant associated with RR, RT and HTC in all the seasons. At A1209G locus in Sahiwal cows for traits RR, genotype AA (18.40±0.46a), AG (19.60±0.85b) and GG (21.18± 0.64ab) and trait HTC AA (1.78±0.04a), AG (1.85±0.03b) and GG (1.91± 0.02c) differ significantly (p<0.01) while trait RT, AG (38.32±0.10b) and GG (38.27±0.08ab) didn’t differ significantly. For a locus A3292C for traits RR, genotype AA (21.55±1.01a), AC (19.66±1.59b) and CC (18.40±1.03c) differ significantly (p<0.05), while traits RT, genotype AA (38.41±0.12), AC (38.28±0.20) and CC (37.96±0.15) didn’t differ significantly. For trait HTC, AA (1.93±0.04a), AC (1.85±0.06b) and CC (1.79±0.05c) found significantly (p<0.05) differ with each other. Our study indicated that Sahiwal cows of AA and AC genotype had better thermo-tolerance capacity, which had been useful for genetic improvement of Sahiwal cattle for heat tolerance traits.

Novel SNPs in ATP1B2 Gene and their Association with Heat Tolerance Indicator Traits in Sahiwal Cattle

2015 ◽  
Author(s):  
Nishant Verma ◽  
I. D. Gupta ◽  
Archana Verma ◽  
Rakesh Kumar ◽  
Ramendra Das
Keyword(s):  
Heat Stress ◽  
Heat Tolerance ◽  
Bos Taurus ◽  
Comparative Sequence Analysis ◽  
Production Performance ◽  
Potential Marker ◽  
Sahiwal Cows ◽  
Shock Proteins ◽  
Hsp Genes ◽  
Indicator Traits

Heat Shock Proteins (HSPs) are expressed in response to heat stress and the polymorphism in HSP genes at single nucleotide level is reported to be associated with heat tolerance and production performance traits in cattle. ATP1B2 gene was mapped to Bos taurus autosome 19 (BTA 19) spanning nearly 4310bp, comprising 7 Exons and 6 Introns. The present study was conducted in Sahiwal cows (n=108) raised under sub-tropical climate with the objectives to identify SNPs in targeted regions (Intron 2,4 and Exon 3,5) of ATP1B2 gene and to analyze their association with heat tolerance traits in Sahiwal cows. Respiration rate (RR) and rectal temperature (RT) were recorded during probable extreme hours in winter, spring and summer seasons. Heat tolerance coefficient (HTC) was also calculated to check the adaptability of the animals during the period of heat stress. The comparative sequence analysis revealed a total of two SNPs in Intron 2 of ATP1B2 gene i.e. g.2243G>A and g.2366T>C. Out of these two identified SNPs, only one SNP i.e. g.2243G>A was found to be significantly (PC, RR, RT and HTC were having non-significant association with the different genotypes i.e. TT and TC. These findings may partly suggest that AA and GA genotype of SNP g.2243G>A of ATP1B2 gene can be utilized as potential marker for propagating thermo-tolerant cattle.

The Heat-Shock Response and Expression of Heat-Shock Proteins in Wheat Under Diurnal Heat Stress and Field Conditions

1994 ◽  
Vol 21 (6) ◽  
pp. 857 ◽  
Author(s):  
HT Nguyen ◽  
CP Joshi ◽  
N Klueva ◽  
J Weng ◽  
KL Hendershot ◽  
...  
Keyword(s):  
Heat Stress ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Heat Tolerance ◽  
Heat Shock Response ◽  
Field Conditions ◽  
Shock Response ◽  
Heat Tolerant ◽  
Shock Proteins

The occurrence of heat-shock proteins (HSPs) in response to high temperature stress is a universal phenomenon in higher plants and has been well documented. However, in agriculturally important species, less is known about the expression of HSPs under natural environments. A review of the heat-shock response in wheat (Triticum aestivum L.) is presented and recent results on the expression of wheat HSPs under diurnal stress and field conditions are reported. In the field experiment, flag leaf blade temperatures were obtained and leaf blades collected for northern blot analysis using HSP 16.9 cDNA as a probe. Temperatures of leaf blades ranged from 32 to 35�C under the tested field conditions at New Deal near Lubbock, Texas. Messenger RNAs encoding a major class of low molecular weight HSPs, HSP 16.9, were detected in all wheat genotypes examined. The results suggested that HSPs are synthesised in response to heat stress under agricultural production, and furthermore, that HSPs are produced in wheats differing in geographic background. In the controlled growth chamber experiment, HSP expression in two wheat cultivars, Mustang (heat tolerant) and Sturdy (heat susceptible) were analysed to determine if wheat genotypes differing in heat tolerance differ in in vitro HSP synthesis (translatable HSP mRNAs) under a chronic, diurnal heat-stress regime. Leaf tissues were collected from seedlings over a time-course and poly (A)+RNAs were isolated for in vitro translation and 2-D gel electrophoresis. The protein profiles shown in the 2-D gel analysis revealed that there were not only quantitative differences of individual HSPs between these two wheat lines, but also some unique HSPs which were only found in the heat tolerant line. This data provides evidence of a correlation between HSP synthesis and heat tolerance in wheat under a simulated field environment and suggests that further genetic analysis of HSPs in a segregating population is worthy of investigation. In conclusion, the results of this study provide an impetus for the investigation of the roles of HSP genes in heat tolerance in wheat.

scholarly journals The association of heat shock protein genetic polymorphisms with age-related hearing impairment in Taiwan

2021 ◽  
Vol 50 (1) ◽  
Author(s):  
Ning-Chia Chang ◽  
Hua-Ling Yang ◽  
Chia-Yen Dai ◽  
Wen-Yi Lin ◽  
Meng-Hsuen Hsieh ◽  
...  
Keyword(s):  
Heat Shock ◽  
Hearing Impairment ◽  
Animal Studies ◽  
Elderly Population ◽  
The Elderly ◽  
Nucleotide Polymorphisms ◽  
Age Related ◽  
Shock Proteins ◽  
Hsp Genes ◽  
Hereditary Model

Abstract Background Age-related hearing impairment (ARHI) is a major disability among the elderly population. Heat shock proteins (HSPs) were found to be associated with ARHI in animal studies. The aim of this study was to analyze the associations of single nucleotide polymorphisms (SNPs) of HSP genes with ARHI in an elderly population in Taiwan. Methods Participants ≥65 years of age were recruited for audiometric tests and genetic analyses. The pure tone average (PTA) of the better hearing ear was calculated for ARHI evaluation. The associations of HSPA1L (rs2075800 and rs2227956), HSPA1A (rs1043618) and HSPA1B (rs2763979) with ARHI were analyzed in 146 ARHI-susceptible (cases) and 146 ARHI-resistant (controls) participants. Results The “T” allele of HSPA1B rs2763979 showed a decreased risk of ARHI. The “TT” genotype of rs2763979 also showed a decreased risk of ARHI in the dominant hereditary model. For HSPA1L (rs2075800 and rs2227956) and HSPA1A (rs1043618), the haplotype “CAG” was related to a decreased risk of ARHI. Conclusion These findings suggest that HSP70 polymorphisms are associated with susceptibility to ARHI in the elderly population. Graphical abstract

scholarly journals The genome of a subterrestrial nematode reveals adaptations to heat

2019 ◽  
Vol 10 (1) ◽  
Author(s):  
Deborah J. Weinstein ◽  
Sarah E. Allen ◽  
Maggie C. Y. Lau ◽  
Mariana Erasmus ◽  
Kathryn C. Asalone ◽  
...  
Keyword(s):  
Heat Stress ◽  
Abiotic Stress ◽  
Heat Shock ◽  
Gene Transfer ◽  
Horizontal Gene Transfer ◽  
Heat Shock Proteins ◽  
Heat Tolerance ◽  
Heterotrophic Prokaryotes ◽  
Shock Proteins ◽  
Genomic Basis

AbstractThe nematode Halicephalobus mephisto was originally discovered inhabiting a deep terrestrial aquifer 1.3 km underground. H. mephisto can thrive under conditions of abiotic stress including heat and minimal oxygen, where it feeds on a community of both chemolithotrophic and heterotrophic prokaryotes in an unusual ecosystem isolated from the surface biosphere. Here we report the comprehensive genome and transcriptome of this organism, identifying a signature of adaptation: an expanded repertoire of 70 kilodalton heat-shock proteins (Hsp70) and avrRpt2 induced gene 1 (AIG1) proteins. The expanded Hsp70 genes are transcriptionally induced upon growth under heat stress, and we find that positive selection is detectable in several members of this family. We further show that AIG1 may have been acquired by horizontal gene transfer (HGT) from a rhizobial fungus. Over one-third of the genes of H. mephisto are novel, highlighting the divergence of this nematode from other sequenced organisms. This work sheds light on the genomic basis of heat tolerance in a complete subterrestrial eukaryotic genome.

scholarly journals Small Heat Shock Proteins, Morphological and Physiological Characteristics Associated with Heat Tolerance in Salvia (Salvia splendens)

HortScience ◽  
2005 ◽  
Vol 40 (4) ◽  
pp. 1115B-1115
Author(s):  
Seenivasan Natarajan ◽  
Jeff Kuehny
Keyword(s):  
Heat Stress ◽  
High Temperature ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Heat Tolerance ◽  
Small Heat Shock Proteins ◽  
Water Soluble ◽  
Soluble Carbohydrate ◽  
Heat Tolerant ◽  
Shock Proteins

Small heat shock proteins (sHSP) are a specific group of highly conserved proteins produced in almost all living organisms under heat stress. These sHSP have been shown to help prevent damage at the biomolecular level in plants. One of the greatest impediments to production of marketable herbaceous plants and their longevity is high temperature stress. The objectives of this experiment were to study the plant responses in terms of sHSP synthesis, single leaf net photosynthesis, total water-soluble carbohydrates (WSC), and overall growth for two S. splendens cultivars differing in performance under heat stress. `Vista Red' (heat tolerant) and `Sizzler Red' (heat sensitive) were exposed to short duration (3 hours) high temperature stresses of 30, 35, and 40 °C in growth chambers. Increasing the temperature to about 10 to 15 °C above the optimal growth temperature (25 °C, control) induced the synthesis of sHSP 27 in S. splendens. Expression of these proteins was significantly greater in the heat-tolerant vs. the heat-sensitive cultivar. Soluble carbohydrate content was greater in `Vista Red', and in both the cultivars raffinose was the primary soluble carbohydrate in heat-stressed plants. Overall growth of plants was significantly different in the two cultivars studied in terms of plant height, stem thickness, number of days to flower, and marketable quality. The better performance of `Vista Red' under heat stress was attributed to its morphological characteristics, including short stature, thicker stems and leaves. sHSPs and WSC are also found to be associated with heat tolerance and heat adaptation in S. splendens.

Identification of heat stress-susceptible and -tolerant phenotypes in goats in semiarid tropics

2018 ◽  
Vol 58 (7) ◽  
pp. 1349 ◽  
Author(s):  
P. K. Rout ◽  
R. Kaushik ◽  
N. Ramachandran ◽  
S. K. Jindal
Keyword(s):  
Heat Stress ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Physiological Response ◽  
Cellular Level ◽  
Production Performance ◽  
C Reactive Protein ◽  
Reactive Protein ◽  
Shock Proteins ◽  
Neutral Conditions

The production performance of livestock is influenced by short-term variation in weather pattern. Goat adapts to varied ecological conditions and maintains productivity; however, wide variation has been observed among individual animals in response to environmental stimuli in a population. The objective of the present study was to identify the contrasting phenotypes on the basis of the physiological response in goats during heat stress. The study utilised 138 Jamunapari and 242 Barbari goats during peak heat-stress period and 82 Jamunapari and Barbari goats under thermo-neutral conditions. The physiological response of goats to different environmental conditions was evaluated by recording various parameters such as rectal temperature (RT), respiration rate (RR) and heart rate (HR). The temperature humidity index varied from 85.36 to 89.80 and from 65.32 to 73.12 during heat-stress and thermo-neutral assessments respectively. There was direct increase in HR and RR (>25%) due to heat stress in the animals, as compared with those in thermo-neutral conditions. On the basis of the distribution of RR and HR values across the breed in the population, the individuals having a RR of ≥50 and a HR of ≥130 are recognised as heat stress-susceptible phenotypes and those having a RR of ≤30 and a HR of ≤100 are recognised as heat stress-tolerant individuals. Different biomarkers were analysed in plasma, while heat-shock proteins and leptin were analysed in tissue extracts by ELISA. C-reactive protein and HSP90 concentrations were significantly (P < 0.05) different between heat stress-susceptible and heat stress-tolerant individuals. Heat-shock proteins HSP70, HSP 90, and C-reactive protein and triiodothyronine were reliable indicators of long-term heat stress. Identification of contrasting phenotypes in regard to heat stress is necessary so as to evaluate the expression pattern at a cellular level, as well as physiological and biochemical parameters.

scholarly journals Proteomic analysis of heat shock proteins in maize (Zea mays L.)

2019 ◽  
Vol 43 (1) ◽  
Author(s):  
Mahmoud Hussien Abou-Deif ◽  
Mohamed Abdel-Salam Rashed ◽  
Kamal Mohamed Khalil ◽  
Fatma El-Sayed Mahmoud
Keyword(s):  
Heat Treatment ◽  
Heat Stress ◽  
Heat Shock ◽  
Heat Shock Proteins ◽  
Proteome Analysis ◽  
High Temperature Stress ◽  
Heat Treatments ◽  
Maize Plants ◽  
Adverse Influence ◽  
Shock Proteins

Abstract Background Maize is one of the important cereal food crops in the world. High temperature stress causes adverse influence on plant growth. When plants are exposed to high temperatures, they produce heat shock proteins (HSPs), which may impart a generalized role in tolerance to heat stress. Proteome analysis was performed in plant to assess the changes in protein types and their expression levels under abiotic stress. The purpose of the study is to explore which proteins are involved in the response of the maize plant to heat shock treatment. Results We investigated the responses of abundant proteins of maize leaves, in an Egyptian inbred line of maize “K1”, upon heat stress through two-dimensional electrophoresis (2-DE) on samples of maize leaf proteome. 2-DE technique was used to recognize heat-responsive protein spots using Coomassie Brilliant Blue (CBB) and silver staining. In 2-D analysis of proteins from plants treated at 45 °C for 2 h, the results manifested 59 protein spots (4.3%) which were reproducibly detected as new spots where did not present in the control. In 2D for treated plants for 4 h, 104 protein spots (7.7%) were expressed only under heat stress. Quantification of spot intensities derived from heat treatment showed that twenty protein spots revealed clear differences between the control and the two heat treatments. Nine spots appeared with more intensity after heat treatments than the control, while four spots appeared only after heat treatments. Five spots were clearly induced after heat treatment either at 2 h or 4 h and were chosen for more analysis by LC-MSMS. They were identified as ATPase beta subunit, HSP26, HSP16.9, and unknown HSP/Chaperonin. Conclusion The results revealed that the expressive level of the four heat shock proteins that were detected in this study plays important roles to avoid heat stress in maize plants.

Localization of metallothionein, heat shock protein (Hsp70), and superoxide dismutase expression in Hemidiaptomus roubaui (Copepoda, Crustacea) exposed to cadmium and heat stress

2007 ◽  
Vol 85 (3) ◽  
pp. 362-371 ◽  
Author(s):  
Martine Liberge ◽  
Roxane-M. Barthélémy
Keyword(s):  
Superoxide Dismutase ◽  
Heat Stress ◽  
Heat Shock ◽  
Metal Binding ◽  
Stress Proteins ◽  
Reproductive Function ◽  
Cadmium Stress ◽  
Specific Distribution ◽  
Freshwater Crustacean ◽  
Shock Proteins

Immunohistochemical methods were applied in the present study to investigate the expression of stress proteins such as metallothioneins (MT), which are metal-binding proteins, and heat shock proteins (Hsp70), as well as an antioxidant enzyme (superoxide dismutase, SOD), in the freshwater crustacean copepod Hemidiaptomus roubaui (Richard, 1888) exposed to cadmium or heat stress. The results show a tissue-specific distribution of MT-like protein after cadmium exposure in the brain and in the nerve cord. Cadmium stress did not provoke inducible Hsp70 or SOD expression. Unlike cadmium, heat stress induced the expression of Hsp70 and SOD in the shell glands, a structure involved in the reproductive function, and more particularly in the formation of the diapause egg envelope. MT expression is not induced in animals exposed to heat stress.

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