scholarly journals AFibNet: An Implementation of Atrial Fibrillation Detection With Convolutional Neural Network

Author(s):  
Bambang Tutuko ◽  
Siti Nurmaini ◽  
Alexander Edo Tondas ◽  
Muhammad Naufal Rachmatullah ◽  
Annisa Darmawahyuni ◽  
...  

Abstract Background: Generalization model capacity of deep learning (DL) approach for atrial fibrillation (AF) detection remains lacking. It can be seen from previous researches, the DL model formation used only a single frequency sampling of the specific device. Besides, each electrocardiogram (ECG) acquisition dataset produces a different length and sampling frequency to ensure sufficient precision of the R-R intervals to determine the Heart Rate Variability (HRV). An accurate HRV is the gold standard for predicting the AF condition. Hence, we propose a DL approach to analyze massive amounts of ECG raw data in a broad range of devices to overcome a current challenge.Results: This paper demonstrates powerful results for end-to-end implementation of AF detection based on a convolutional neural network (AFibNet). The method used a single learning system without considering the variety of signal lengths and frequency samplings. For implementation, the AFibNet is processed with a computational cloud-based DL approach. This study utilized a one-dimension convolutional neural networks (1D-CNNs) model for 11,842 subjects. It was trained and validated with 8,232 records based on three datasets and tested with 3,610 records based on eight datasets. The predicted results, when compared with the diagnosis results indicated by human practitioners, showed a 99.80% accuracy, sensitivity, and specificity. When tested with unseen data, the AF detection reaches 98.94% accuracy, 98.97% sensitivity, and 98.97% specificity in 0.02 seconds for one instance when processed in theDL-Cloud System.Conclusions: These findings demonstrate that the proposed model approach can used in a broad range of devices and validated to unknown data to derive feature maps and reliably detect the AF periods. We have found that our cloud-DL system is suitable for practical deployment.

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Bambang Tutuko ◽  
Siti Nurmaini ◽  
Alexander Edo Tondas ◽  
Muhammad Naufal Rachmatullah ◽  
Annisa Darmawahyuni ◽  
...  

Abstract Background Generalization model capacity of deep learning (DL) approach for atrial fibrillation (AF) detection remains lacking. It can be seen from previous researches, the DL model formation used only a single frequency sampling of the specific device. Besides, each electrocardiogram (ECG) acquisition dataset produces a different length and sampling frequency to ensure sufficient precision of the R–R intervals to determine the heart rate variability (HRV). An accurate HRV is the gold standard for predicting the AF condition; therefore, a current challenge is to determine whether a DL approach can be used to analyze raw ECG data in a broad range of devices. This paper demonstrates powerful results for end-to-end implementation of AF detection based on a convolutional neural network (AFibNet). The method used a single learning system without considering the variety of signal lengths and frequency samplings. For implementation, the AFibNet is processed with a computational cloud-based DL approach. This study utilized a one-dimension convolutional neural networks (1D-CNNs) model for 11,842 subjects. It was trained and validated with 8232 records based on three datasets and tested with 3610 records based on eight datasets. The predicted results, when compared with the diagnosis results indicated by human practitioners, showed a 99.80% accuracy, sensitivity, and specificity. Result Meanwhile, when tested using unseen data, the AF detection reaches 98.94% accuracy, 98.97% sensitivity, and 98.97% specificity at a sample period of 0.02 seconds using the DL Cloud System. To improve the confidence of the AFibNet model, it also validated with 18 arrhythmias condition defined as Non-AF-class. Thus, the data is increased from 11,842 to 26,349 instances for three-class, i.e., Normal sinus (N), AF and Non-AF. The result found 96.36% accuracy, 93.65% sensitivity, and 96.92% specificity. Conclusion These findings demonstrate that the proposed approach can use unknown data to derive feature maps and reliably detect the AF periods. We have found that our cloud-DL system is suitable for practical deployment


2021 ◽  
Author(s):  
Lakpa Dorje Tamang

In this paper, we propose a symmetric series convolutional neural network (SS-CNN), which is a novel deep convolutional neural network (DCNN)-based super-resolution (SR) technique for ultrasound medical imaging. The proposed model comprises two parts: a feature extraction network (FEN) and an up-sampling layer. In the FEN, the low-resolution (LR) counterpart of the ultrasound image passes through a symmetric series of two different DCNNs. The low-level feature maps obtained from the subsequent layers of both DCNNs are concatenated in a feed forward manner, aiding in robust feature extraction to ensure high reconstruction quality. Subsequently, the final concatenated features serve as an input map to the latter 2D convolutional layers, where the textural information of the input image is connected via skip connections. The second part of the proposed model is a sub-pixel convolutional (SPC) layer, which up-samples the output of the FEN by multiplying it with a multi-dimensional kernel followed by a periodic shuffling operation to reconstruct a high-quality SR ultrasound image. We validate the performance of the SS-CNN with publicly available ultrasound image datasets. Experimental results show that the proposed model achieves an exquisite reconstruction performance of ultrasound image over the conventional methods in terms of peak signal-to-noise ratio (PSNR), and structural similarity index (SSIM), while providing compelling SR reconstruction time.


Author(s):  
Xingxiang Tao ◽  
Hao Dang ◽  
Xiangdong Xu ◽  
Xiaoguang Zhou ◽  
Danqun Xiong

Atrial fibrillation (AF) is the most common cardiac arrhythmia, and it can cause a variety of cardiovascular diseases. This brings great hidden danger to people’s health and life safety all over the world. Electrocardiogram (ECG) is one of the most important noninvasive diagnostic tools for heart disease. Accurate interpretation of ECG is particularly important for the detection and treatment of AF. It is valuable to develop an efficient, accurate, and stable automatic AF detection algorithm in clinical settings. Therefore, this article proposes a novel integrated module, which combines densely connected convolutional network (DenseNet) module and bidirectional long short-term memory (BLSTM) module, based on the excellent ability of BLSTM on extracting the time series features, while DenseNet on capturing local features. Furthermore, we also propose a novel network architecture (MF-DenseNet–BLSTM) based on the integrated module mentioned above and multi-feature fusion for automatic AF detection using the ECG signals. The proposed model employs the architecture of dual-stream deep neural network to fusing multiple features. Specifically, the network of each stream structure consists of two parts with DenseNet module and BLSTM module. The data sets used to validate and test the proposed model are from the MIT-BIH Atrial Fibrillation Database. The experimental results show that the proposed model achieved 98.81% accuracy in training set, and achieved 98.04% accuracy in the testing set which is unseen data set. The proposed MF-DenseNet–BLSTM has shown excellent robustness and accuracy in automatic AF detection.


2021 ◽  
Author(s):  
Lakpa Dorje Tamang

In this paper, we propose a symmetric series convolutional neural network (SS-CNN), which is a novel deep convolutional neural network (DCNN)-based super-resolution (SR) technique for ultrasound medical imaging. The proposed model comprises two parts: a feature extraction network (FEN) and an up-sampling layer. In the FEN, the low-resolution (LR) counterpart of the ultrasound image passes through a symmetric series of two different DCNNs. The low-level feature maps obtained from the subsequent layers of both DCNNs are concatenated in a feed forward manner, aiding in robust feature extraction to ensure high reconstruction quality. Subsequently, the final concatenated features serve as an input map to the latter 2D convolutional layers, where the textural information of the input image is connected via skip connections. The second part of the proposed model is a sub-pixel convolutional (SPC) layer, which up-samples the output of the FEN by multiplying it with a multi-dimensional kernel followed by a periodic shuffling operation to reconstruct a high-quality SR ultrasound image. We validate the performance of the SS-CNN with publicly available ultrasound image datasets. Experimental results show that the proposed model achieves an exquisite reconstruction performance of ultrasound image over the conventional methods in terms of peak signal-to-noise ratio (PSNR), and structural similarity index (SSIM), while providing compelling SR reconstruction time.


2021 ◽  
Vol 11 (6) ◽  
pp. 2838
Author(s):  
Nikitha Johnsirani Venkatesan ◽  
Dong Ryeol Shin ◽  
Choon Sung Nam

In the pharmaceutical field, early detection of lung nodules is indispensable for increasing patient survival. We can enhance the quality of the medical images by intensifying the radiation dose. High radiation dose provokes cancer, which forces experts to use limited radiation. Using abrupt radiation generates noise in CT scans. We propose an optimal Convolutional Neural Network model in which Gaussian noise is removed for better classification and increased training accuracy. Experimental demonstration on the LUNA16 dataset of size 160 GB shows that our proposed method exhibit superior results. Classification accuracy, specificity, sensitivity, Precision, Recall, F1 measurement, and area under the ROC curve (AUC) of the model performance are taken as evaluation metrics. We conducted a performance comparison of our proposed model on numerous platforms, like Apache Spark, GPU, and CPU, to depreciate the training time without compromising the accuracy percentage. Our results show that Apache Spark, integrated with a deep learning framework, is suitable for parallel training computation with high accuracy.


Sensors ◽  
2021 ◽  
Vol 21 (8) ◽  
pp. 2648
Author(s):  
Muhammad Aamir ◽  
Tariq Ali ◽  
Muhammad Irfan ◽  
Ahmad Shaf ◽  
Muhammad Zeeshan Azam ◽  
...  

Natural disasters not only disturb the human ecological system but also destroy the properties and critical infrastructures of human societies and even lead to permanent change in the ecosystem. Disaster can be caused by naturally occurring events such as earthquakes, cyclones, floods, and wildfires. Many deep learning techniques have been applied by various researchers to detect and classify natural disasters to overcome losses in ecosystems, but detection of natural disasters still faces issues due to the complex and imbalanced structures of images. To tackle this problem, we propose a multilayered deep convolutional neural network. The proposed model works in two blocks: Block-I convolutional neural network (B-I CNN), for detection and occurrence of disasters, and Block-II convolutional neural network (B-II CNN), for classification of natural disaster intensity types with different filters and parameters. The model is tested on 4428 natural images and performance is calculated and expressed as different statistical values: sensitivity (SE), 97.54%; specificity (SP), 98.22%; accuracy rate (AR), 99.92%; precision (PRE), 97.79%; and F1-score (F1), 97.97%. The overall accuracy for the whole model is 99.92%, which is competitive and comparable with state-of-the-art algorithms.


Entropy ◽  
2020 ◽  
Vol 22 (9) ◽  
pp. 949
Author(s):  
Jiangyi Wang ◽  
Min Liu ◽  
Xinwu Zeng ◽  
Xiaoqiang Hua

Convolutional neural networks have powerful performances in many visual tasks because of their hierarchical structures and powerful feature extraction capabilities. SPD (symmetric positive definition) matrix is paid attention to in visual classification, because it has excellent ability to learn proper statistical representation and distinguish samples with different information. In this paper, a deep neural network signal detection method based on spectral convolution features is proposed. In this method, local features extracted from convolutional neural network are used to construct the SPD matrix, and a deep learning algorithm for the SPD matrix is used to detect target signals. Feature maps extracted by two kinds of convolutional neural network models are applied in this study. Based on this method, signal detection has become a binary classification problem of signals in samples. In order to prove the availability and superiority of this method, simulated and semi-physical simulated data sets are used. The results show that, under low SCR (signal-to-clutter ratio), compared with the spectral signal detection method based on the deep neural network, this method can obtain a gain of 0.5–2 dB on simulated data sets and semi-physical simulated data sets.


Author(s):  
Young Hyun Kim ◽  
Eun-Gyu Ha ◽  
Kug Jin Jeon ◽  
Chena Lee ◽  
Sang-Sun Han

Objectives: This study aimed to develop a fully automated human identification method based on a convolutional neural network (CNN) with a large-scale dental panoramic radiograph (DPR) dataset. Methods: In total, 2,760 DPRs from 746 subjects who had 2 to 17 DPRs with various changes in image characteristics due to various dental treatments (tooth extraction, oral surgery, prosthetics, orthodontics, or tooth development) were collected. The test dataset included the latest DPR of each subject (746 images) and the other DPRs (2,014 images) were used for model training. A modified VGG16 model with two fully connected layers was applied for human identification. The proposed model was evaluated with rank-1, –3, and −5 accuracies, running time, and gradient-weighted class activation mapping (Grad-CAM)–applied images. Results: This model had rank-1,–3, and −5 accuracies of 82.84%, 89.14%, and 92.23%, respectively. All rank-1 accuracy values of the proposed model were above 80% regardless of changes in image characteristics. The average running time to train the proposed model was 60.9 sec per epoch, and the prediction time for 746 test DPRs was short (3.2 sec/image). The Grad-CAM technique verified that the model automatically identified humans by focusing on identifiable dental information. Conclusion: The proposed model showed good performance in fully automatic human identification despite differing image characteristics of DPRs acquired from the same patients. Our model is expected to assist in the fast and accurate identification by experts by comparing large amounts of images and proposing identification candidates at high speed.


Author(s):  
Ramesh Adhikari ◽  
Suresh Pokharel

Data augmentation is widely used in image processing and pattern recognition problems in order to increase the richness in diversity of available data. It is commonly used to improve the classification accuracy of images when the available datasets are limited. Deep learning approaches have demonstrated an immense breakthrough in medical diagnostics over the last decade. A significant amount of datasets are needed for the effective training of deep neural networks. The appropriate use of data augmentation techniques prevents the model from over-fitting and thus increases the generalization capability of the network while testing afterward on unseen data. However, it remains a huge challenge to obtain such a large dataset from rare diseases in the medical field. This study presents the synthetic data augmentation technique using Generative Adversarial Networks to evaluate the generalization capability of neural networks using existing data more effectively. In this research, the convolutional neural network (CNN) model is used to classify the X-ray images of the human chest in both normal and pneumonia conditions; then, the synthetic images of the X-ray from the available dataset are generated by using the deep convolutional generative adversarial network (DCGAN) model. Finally, the CNN model is trained again with the original dataset and augmented data generated using the DCGAN model. The classification performance of the CNN model is improved by 3.2% when the augmented data were used along with the originally available dataset.


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