scholarly journals AFibNet: an implementation of atrial fibrillation detection with convolutional neural network

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Bambang Tutuko ◽  
Siti Nurmaini ◽  
Alexander Edo Tondas ◽  
Muhammad Naufal Rachmatullah ◽  
Annisa Darmawahyuni ◽  
...  
Keyword(s):  
Neural Network ◽  
Atrial Fibrillation ◽  
Convolutional Neural Network ◽  
Learning System ◽  
Single Frequency ◽  
Feature Maps ◽  
Normal Sinus ◽  
Unseen Data ◽  
Specific Device ◽  
Model Formation

Abstract Background Generalization model capacity of deep learning (DL) approach for atrial fibrillation (AF) detection remains lacking. It can be seen from previous researches, the DL model formation used only a single frequency sampling of the specific device. Besides, each electrocardiogram (ECG) acquisition dataset produces a different length and sampling frequency to ensure sufficient precision of the R–R intervals to determine the heart rate variability (HRV). An accurate HRV is the gold standard for predicting the AF condition; therefore, a current challenge is to determine whether a DL approach can be used to analyze raw ECG data in a broad range of devices. This paper demonstrates powerful results for end-to-end implementation of AF detection based on a convolutional neural network (AFibNet). The method used a single learning system without considering the variety of signal lengths and frequency samplings. For implementation, the AFibNet is processed with a computational cloud-based DL approach. This study utilized a one-dimension convolutional neural networks (1D-CNNs) model for 11,842 subjects. It was trained and validated with 8232 records based on three datasets and tested with 3610 records based on eight datasets. The predicted results, when compared with the diagnosis results indicated by human practitioners, showed a 99.80% accuracy, sensitivity, and specificity. Result Meanwhile, when tested using unseen data, the AF detection reaches 98.94% accuracy, 98.97% sensitivity, and 98.97% specificity at a sample period of 0.02 seconds using the DL Cloud System. To improve the confidence of the AFibNet model, it also validated with 18 arrhythmias condition defined as Non-AF-class. Thus, the data is increased from 11,842 to 26,349 instances for three-class, i.e., Normal sinus (N), AF and Non-AF. The result found 96.36% accuracy, 93.65% sensitivity, and 96.92% specificity. Conclusion These findings demonstrate that the proposed approach can use unknown data to derive feature maps and reliably detect the AF periods. We have found that our cloud-DL system is suitable for practical deployment

scholarly journals AFibNet: An Implementation of Atrial Fibrillation Detection With Convolutional Neural Network

2021 ◽  
Author(s):  
Bambang Tutuko ◽  
Siti Nurmaini ◽  
Alexander Edo Tondas ◽  
Muhammad Naufal Rachmatullah ◽  
Annisa Darmawahyuni ◽  
...  
Keyword(s):  
Neural Network ◽  
Atrial Fibrillation ◽  
Convolutional Neural Network ◽  
Learning System ◽  
Single Frequency ◽  
Feature Maps ◽  
Proposed Model ◽  
Unseen Data ◽  
Specific Device ◽  
Model Formation

Abstract Background: Generalization model capacity of deep learning (DL) approach for atrial fibrillation (AF) detection remains lacking. It can be seen from previous researches, the DL model formation used only a single frequency sampling of the specific device. Besides, each electrocardiogram (ECG) acquisition dataset produces a different length and sampling frequency to ensure sufficient precision of the R-R intervals to determine the Heart Rate Variability (HRV). An accurate HRV is the gold standard for predicting the AF condition. Hence, we propose a DL approach to analyze massive amounts of ECG raw data in a broad range of devices to overcome a current challenge.Results: This paper demonstrates powerful results for end-to-end implementation of AF detection based on a convolutional neural network (AFibNet). The method used a single learning system without considering the variety of signal lengths and frequency samplings. For implementation, the AFibNet is processed with a computational cloud-based DL approach. This study utilized a one-dimension convolutional neural networks (1D-CNNs) model for 11,842 subjects. It was trained and validated with 8,232 records based on three datasets and tested with 3,610 records based on eight datasets. The predicted results, when compared with the diagnosis results indicated by human practitioners, showed a 99.80% accuracy, sensitivity, and specificity. When tested with unseen data, the AF detection reaches 98.94% accuracy, 98.97% sensitivity, and 98.97% specificity in 0.02 seconds for one instance when processed in theDL-Cloud System.Conclusions: These findings demonstrate that the proposed model approach can used in a broad range of devices and validated to unknown data to derive feature maps and reliably detect the AF periods. We have found that our cloud-DL system is suitable for practical deployment.

scholarly journals Detection of Brief Episodes of Atrial Fibrillation Based on Electrocardiomatrix and Convolutional Neural Network

2021 ◽  
Vol 12 ◽  
Author(s):  
Ricardo Salinas-Martínez ◽  
Johannes de Bie ◽  
Nicoletta Marzocchi ◽  
Frida Sandberg
Keyword(s):  
Neural Network ◽  
Atrial Fibrillation ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Thrombus Formation ◽  
Normal Sinus Rhythm ◽  
Morphological Characteristics ◽  
P Wave ◽  
Learning Approaches ◽  
Normal Sinus

Background: Brief episodes of atrial fibrillation (AF) may evolve into longer AF episodes increasing the chances of thrombus formation, stroke, and death. Classical methods for AF detection investigate rhythm irregularity or P-wave absence in the ECG, while deep learning approaches profit from the availability of annotated ECG databases to learn discriminatory features linked to different diagnosis. However, some deep learning approaches do not provide analysis of the features used for classification. This paper introduces a convolutional neural network (CNN) approach for automatic detection of brief AF episodes based on electrocardiomatrix-images (ECM-images) aiming to link deep learning to features with clinical meaning.Materials and Methods: The CNN is trained using two databases: the Long-Term Atrial Fibrillation and the MIT-BIH Normal Sinus Rhythm, and tested on three databases: the MIT-BIH Atrial Fibrillation, the MIT-BIH Arrhythmia, and the Monzino-AF. Detection of AF is done using a sliding window of 10 beats plus 3 s. Performance is quantified using both standard classification metrics and the EC57 standard for arrhythmia detection. Layer-wise relevance propagation analysis was applied to link the decisions made by the CNN to clinical characteristics in the ECG.Results: For all three testing databases, episode sensitivity was greater than 80.22, 89.66, and 97.45% for AF episodes shorter than 15, 30 s, and for all episodes, respectively.Conclusions: Rhythm and morphological characteristics of the electrocardiogram can be learned by a CNN from ECM-images for the detection of brief episodes of AF.

scholarly journals Spectral Convolution Feature-Based SPD Matrix Representation for Signal Detection Using a Deep Neural Network

Entropy ◽  
2020 ◽  
Vol 22 (9) ◽  
pp. 949
Author(s):  
Jiangyi Wang ◽  
Min Liu ◽  
Xinwu Zeng ◽  
Xiaoqiang Hua
Keyword(s):  
Neural Network ◽  
Signal Detection ◽  
Convolutional Neural Network ◽  
Deep Neural Network ◽  
Detection Method ◽  
Learning Algorithm ◽  
Simulated Data ◽  
Data Sets ◽  
Feature Maps ◽  
Simulated Data Sets

Convolutional neural networks have powerful performances in many visual tasks because of their hierarchical structures and powerful feature extraction capabilities. SPD (symmetric positive definition) matrix is paid attention to in visual classification, because it has excellent ability to learn proper statistical representation and distinguish samples with different information. In this paper, a deep neural network signal detection method based on spectral convolution features is proposed. In this method, local features extracted from convolutional neural network are used to construct the SPD matrix, and a deep learning algorithm for the SPD matrix is used to detect target signals. Feature maps extracted by two kinds of convolutional neural network models are applied in this study. Based on this method, signal detection has become a binary classification problem of signals in samples. In order to prove the availability and superiority of this method, simulated and semi-physical simulated data sets are used. The results show that, under low SCR (signal-to-clutter ratio), compared with the spectral signal detection method based on the deep neural network, this method can obtain a gain of 0.5–2 dB on simulated data sets and semi-physical simulated data sets.

Performance Evaluation of Convolutional Neural Network Using Synthetic Medical Data Augmentation Generated by GAN

2021 ◽  
Author(s):  
Ramesh Adhikari ◽  
Suresh Pokharel
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Convolutional Neural Network ◽  
Data Augmentation ◽  
Medical Diagnostics ◽  
Generative Adversarial Networks ◽  
Generalization Capability ◽  
X Ray ◽  
Original Dataset ◽  
Unseen Data

Data augmentation is widely used in image processing and pattern recognition problems in order to increase the richness in diversity of available data. It is commonly used to improve the classification accuracy of images when the available datasets are limited. Deep learning approaches have demonstrated an immense breakthrough in medical diagnostics over the last decade. A significant amount of datasets are needed for the effective training of deep neural networks. The appropriate use of data augmentation techniques prevents the model from over-fitting and thus increases the generalization capability of the network while testing afterward on unseen data. However, it remains a huge challenge to obtain such a large dataset from rare diseases in the medical field. This study presents the synthetic data augmentation technique using Generative Adversarial Networks to evaluate the generalization capability of neural networks using existing data more effectively. In this research, the convolutional neural network (CNN) model is used to classify the X-ray images of the human chest in both normal and pneumonia conditions; then, the synthetic images of the X-ray from the available dataset are generated by using the deep convolutional generative adversarial network (DCGAN) model. Finally, the CNN model is trained again with the original dataset and augmented data generated using the DCGAN model. The classification performance of the CNN model is improved by 3.2% when the augmented data were used along with the originally available dataset.

scholarly journals PedNet: A Spatio-Temporal Deep Convolutional Neural Network for Pedestrian Segmentation

2018 ◽  
Vol 4 (9) ◽  
pp. 107 ◽  
Author(s):  
Mohib Ullah ◽  
Ahmed Mohammed ◽  
Faouzi Alaya Cheikh
Keyword(s):  
Neural Network ◽  
Convolutional Neural Network ◽  
Performance Metrics ◽  
State Of The Art ◽  
Temporal Information ◽  
Feature Maps ◽  
Current Frame ◽  
Low Level ◽  
Art Methods ◽  
Spatio Temporal

Articulation modeling, feature extraction, and classification are the important components of pedestrian segmentation. Usually, these components are modeled independently from each other and then combined in a sequential way. However, this approach is prone to poor segmentation if any individual component is weakly designed. To cope with this problem, we proposed a spatio-temporal convolutional neural network named PedNet which exploits temporal information for spatial segmentation. The backbone of the PedNet consists of an encoder–decoder network for downsampling and upsampling the feature maps, respectively. The input to the network is a set of three frames and the output is a binary mask of the segmented regions in the middle frame. Irrespective of classical deep models where the convolution layers are followed by a fully connected layer for classification, PedNet is a Fully Convolutional Network (FCN). It is trained end-to-end and the segmentation is achieved without the need of any pre- or post-processing. The main characteristic of PedNet is its unique design where it performs segmentation on a frame-by-frame basis but it uses the temporal information from the previous and the future frame for segmenting the pedestrian in the current frame. Moreover, to combine the low-level features with the high-level semantic information learned by the deeper layers, we used long-skip connections from the encoder to decoder network and concatenate the output of low-level layers with the higher level layers. This approach helps to get segmentation map with sharp boundaries. To show the potential benefits of temporal information, we also visualized different layers of the network. The visualization showed that the network learned different information from the consecutive frames and then combined the information optimally to segment the middle frame. We evaluated our approach on eight challenging datasets where humans are involved in different activities with severe articulation (football, road crossing, surveillance). The most common CamVid dataset which is used for calculating the performance of the segmentation algorithm is evaluated against seven state-of-the-art methods. The performance is shown on precision/recall, F 1 , F 2 , and mIoU. The qualitative and quantitative results show that PedNet achieves promising results against state-of-the-art methods with substantial improvement in terms of all the performance metrics.

scholarly journals Permutation Entropy-Based Interpretability of Convolutional Neural Network Models for Interictal EEG Discrimination of Subjects with Epileptic Seizures vs. Psychogenic Non-Epileptic Seizures

Entropy ◽  
2022 ◽  
Vol 24 (1) ◽  
pp. 102
Author(s):  
Michele Lo Giudice ◽  
Giuseppe Varone ◽  
Cosimo Ieracitano ◽  
Nadia Mammone ◽  
Giovanbattista Gaspare Tripodi ◽  
...  
Keyword(s):  
Neural Network ◽  
Discriminant Analysis ◽  
Convolutional Neural Network ◽  
Epileptic Seizures ◽  
Permutation Entropy ◽  
Diagnostic Tools ◽  
Support Vector ◽  
Feature Maps ◽  
Time Frequency ◽  
Interictal Eeg

The differential diagnosis of epileptic seizures (ES) and psychogenic non-epileptic seizures (PNES) may be difficult, due to the lack of distinctive clinical features. The interictal electroencephalographic (EEG) signal may also be normal in patients with ES. Innovative diagnostic tools that exploit non-linear EEG analysis and deep learning (DL) could provide important support to physicians for clinical diagnosis. In this work, 18 patients with new-onset ES (12 males, 6 females) and 18 patients with video-recorded PNES (2 males, 16 females) with normal interictal EEG at visual inspection were enrolled. None of them was taking psychotropic drugs. A convolutional neural network (CNN) scheme using DL classification was designed to classify the two categories of subjects (ES vs. PNES). The proposed architecture performs an EEG time-frequency transformation and a classification step with a CNN. The CNN was able to classify the EEG recordings of subjects with ES vs. subjects with PNES with 94.4% accuracy. CNN provided high performance in the assigned binary classification when compared to standard learning algorithms (multi-layer perceptron, support vector machine, linear discriminant analysis and quadratic discriminant analysis). In order to interpret how the CNN achieved this performance, information theoretical analysis was carried out. Specifically, the permutation entropy (PE) of the feature maps was evaluated and compared in the two classes. The achieved results, although preliminary, encourage the use of these innovative techniques to support neurologists in early diagnoses.

scholarly journals Block-Based Compression and Corresponding Hardware Circuits for Sparse Activations

Sensors ◽  
2021 ◽  
Vol 21 (22) ◽  
pp. 7468
Author(s):  
Yui-Kai Weng ◽  
Shih-Hsu Huang ◽  
Hsu-Yu Kao
Keyword(s):  
Neural Network ◽  
Power Consumption ◽  
Convolutional Neural Network ◽  
Feature Maps ◽  
Benchmark Data ◽  
Data Volume ◽  
Block Based

In a CNN (convolutional neural network) accelerator, to reduce memory traffic and power consumption, there is a need to exploit the sparsity of activation values. Therefore, some research efforts have been paid to skip ineffectual computations (i.e., multiplications by zero). Different from previous works, in this paper, we point out the similarity of activation values: (1) in the same layer of a CNN model, most feature maps are either highly dense or highly sparse; (2) in the same layer of a CNN model, feature maps in different channels are often similar. Based on the two observations, we propose a block-based compression approach, which utilizes both the sparsity and the similarity of activation values to further reduce the data volume. Moreover, we also design an encoder, a decoder and an indexing module to support the proposed approach. The encoder is used to translate output activations into the proposed block-based compression format, while both the decoder and the indexing module are used to align nonzero values for effectual computations. Compared with previous works, benchmark data consistently show that the proposed approach can greatly reduce both memory traffic and power consumption.

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