scholarly journals Spatiotemporal Prediction of the Occurrence of Vancomycin-resistant Enterococcus

Author(s):  
J. M. van Niekerk ◽  
M. Lokate ◽  
L. M. A. Braakman-Jansen ◽  
J. E. W. C. van Gemert-Pijnen ◽  
A. Stein

Abstract Background: Vancomycin-resistant enterococci (VRE) is the cause of severe patient health and monetary burdens. Antibiotic use is a confounding effect to predict VRE in patients, but the antibiotic use of patients who may have frequented the same ward as the patient in question is often neglected. This study investigated how the occurrence and spread of VRE can be explained by patient movements between hospital wards and their antibiotic use.Methods: Intrahospital patient movements, antibiotic use and PCR screening data were used from a hospital in the Netherlands. The PageRank algorithm was used to calculate two daily centrality measures based on the spatiotemporal graph to summarise the flow of patients and antibiotics at the ward level. A decision tree model was used to determine a simple set of rules to estimate the daily probability of VRE occurrence for each hospital ward. The model performance was improved using a random forest model and compared using 30% test sample.Results: Centrality covariates summarising the flow of patients and their antibiotic use between hospital wards can be used to predict the daily occurrence of VRE at the hospital ward level. The decision tree model produced a simple set of rules that can be used to determine the daily probability of VRE occurrence for each hospital ward. An acceptable area under the ROC curve (AUC) of 0.755 was achieved using the decision tree model and an excellent AUC of 0.883 by the random forest model on the test set. These results confirms that the random forest model performs better than a single decision tree for all levels of model sensitivity and specificity on data not used to estimate the models.Conclusion: This study showed how the movements of patients inside hospitals and their use of antibiotics could predict VRE occurrence at the ward level. Two daily centrality measures were proposed to summarise the flow of patients and antibiotics at the ward level. An early warning system for VRE can be developed to test and further develop infection prevention plans and outbreak strategies using these results.

2021 ◽  
Author(s):  
Hemalatha N ◽  
Akhil Wilson ◽  
Akhil Thankachan

Plastic pollution is one of the challenging problems in the environment. But a life without plastic we cannot imagine. This paper deals with the prediction of plastic degrading microbes using Machine Learning. Here we have used Decision Tree, Random Forest, Support vector Machine and K Nearest Neighbor algorithms in order to predict the plastic degrading microbes. Among the four classifiers, Random Forest model gave the best accuracy of 99.1%.


2020 ◽  
Vol 6 (1) ◽  
pp. 7-14
Author(s):  
Achmad Udin Zailani ◽  
Nugraha Listiana Hanun

In English : Credit is the provision of money or bills which can be equalized with an agreement or deal between the bank and another parties that requires the borrower to pay off the debt after a certain period of time through interest. Before the cooperative approves the credit proposed by the debtor, the cooperative conducts a credit analysis of borrowers whether the credit application is approved or disapproved. This study objectives to predict creditworthiness by applying the Random Forest Classification Algorithm in order to provide a solution for determining the creditworthiness.This research method is absolute experimental research that leads to the impact resulting from experiments on the application of the decision tree model of the Random Forest Classification Algorithm’s approach. The study results using the Random Forest Classification Algorithm’s are able to analyze problem credit and disproblems debtors with an accuracy value of 87.88%. Besides that,. decision tree model was able to improve the accuracy in analyzing the credit worthiness of borrowers who filed. In Indonesian : Kredit adalah penyediaan uang atau tagihan yang dapat dipersamakan atas persetujuan atau kesepakatan pinjam meminjam antara bank dengan pihak lain yang mewajibkan pihak peminjam melunasi utangnya setelah jangka waktu tertentu dengan pemberian bunga. Koperasi Mitra Sejahtera menghadapi masalah pembayaran pihak peminjam atas tunggakan kredit. Penelitian ini bertujuan untuk memprediksi kelayakan kredit dengan penerapan Algoritma Klasifikasi Random Forest agar dapat memberikan solusi untuk penentuan kelayakan pemberian kredit. Metode penelitian ini adalah riset eksperimen absolut yang mengarah kepada dampak yang dihasilkan dari eksperimen atas penerapan model pohon keputusan menggunakan pendekatan Algoritma Klasifikasi Random Forest. Hasil pengujian dengan algoritma klasifikasi Random Forest mampu menganalisis kredit yang bermasalah dan yang debitur yang tidak bermasalah dengan nilai akurasi sebesar 87,88%. Di samping itu, model pohon keputusan ternyata mampu meningkatkan akurasi dalam menganalisis kelayakan kredit yang diajukan calon debitur.


2020 ◽  
Vol 6 (1) ◽  
pp. 7-14
Author(s):  
Achmad Udin Zailani ◽  
Nugraha Listiana Hanun

Credit is the provision of money or bills which can be equalized with an agreement or deal between the bank and another parties that requires the borrower to pay off the debt after a certain period of time through interest. Before the cooperative approves the credit proposed by the debtor, the cooperative conducts a credit analysis of borrowers whether the credit application is approved or disapproved. This study objectives to predict creditworthiness by applying the Random Forest Classification Algorithm in order to provide a solution for determining the creditworthiness.This research method is absolute experimental research that leads to the impact resulting from experiments on the application of the decision tree model of the Random Forest Classification Algorithm’s approach. The study results using the Random Forest Classification Algorithm’s are able to analyze problem credit and disproblems debtors with an accuracy value of 87.88%. Besides that,. decision tree model was able to improve the accuracy in analyzing the credit worthiness of borrowers who filed.


2021 ◽  
Vol 12 (3) ◽  
pp. 1384-1393
Author(s):  
Khodijah Hulliyah Et.al

Recognizing emotions through the brain wave approach with facial or sound expression is widely used, but few use text stimuli. Therefore, this study aims to analyze the emotion recognition experiment by stimulating sentiment-tones using EEG. The process of classifying emotions uses a random forest model approach which is compared with two models, namely Support Vector Machine and decision tree as benchmarks. The raw data used comes from the results of scrapping Twitter data. The dataset of emotional annotation was carried out manually based on four classifications, specifically: happiness, sadness, fear, and anger. The annotated dataset was tested using an Electroencephalogram (EEG) device attached to the participant's head to determine the brain waves appearing after reading the text. The results showed that the random forest model has the highest accuracy level with a rate of 98% which is slightly different from the decision tree with 88%. Meanwhile, in SVM the accuracy results are less good with a rate of 32%. Furthermore, the match level of angry emotions from the three models above during manual annotation and using the EEG device showed a high number with an average value above 90%, because reading with angry expressions is easier to perform. For this reason, this study aims to test the emotion recognition experiment by stimulating sentiment-tones using EEG. The process of classifying emotions uses a random forest model approach which is compared with two models, namely SVM and decision tree as benchmarks. The dataset used comes from the results of scrapping Twitter data.


2015 ◽  
Vol 97 (2) ◽  
pp. 209-217 ◽  
Author(s):  
Vrushali Y. Kulkarni ◽  
Pradeep K. Sinha ◽  
Manisha C. Petare

Author(s):  
Avijit Kumar Chaudhuri ◽  
Deepankar Sinha ◽  
Dilip K. Banerjee ◽  
Anirban Das

2021 ◽  
Author(s):  
Christian Thiele ◽  
Gerrit Hirschfeld ◽  
Ruth von Brachel

AbstractRegistries of clinical trials are a potential source for scientometric analysis of medical research and serve important functions for the research community and the public at large. Clinical trials that recruit patients in Germany are usually registered in the German Clinical Trials Register (DRKS) or in international registries such as ClinicalTrials.gov. Furthermore, the International Clinical Trials Registry Platform (ICTRP) aggregates trials from multiple primary registries. We queried the DRKS, ClinicalTrials.gov, and the ICTRP for trials with a recruiting location in Germany. Trials that were registered in multiple registries were linked using the primary and secondary identifiers and a Random Forest model based on various similarity metrics. We identified 35,912 trials that were conducted in Germany. The majority of the trials was registered in multiple databases. 32,106 trials were linked using primary IDs, 26 were linked using a Random Forest model, and 10,537 internal duplicates on ICTRP were identified using the Random Forest model after finding pairs with matching primary or secondary IDs. In cross-validation, the Random Forest increased the F1-score from 96.4% to 97.1% compared to a linkage based solely on secondary IDs on a manually labelled data set. 28% of all trials were registered in the German DRKS. 54% of the trials on ClinicalTrials.gov, 43% of the trials on the DRKS and 56% of the trials on the ICTRP were pre-registered. The ratio of pre-registered studies and the ratio of studies that are registered in the DRKS increased over time.


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