scholarly journals Allelic Variation at the Vernalization Genes Vrn-A1 , Vrn-B1 , Vrn-D1 , and Vrn-B3 in Chinese Wheat Cultivars and Their Association with Growth Habit

Crop Science ◽  
2008 ◽  
Vol 48 (2) ◽  
pp. 458-470 ◽  
Author(s):  
X. K. Zhang ◽  
Y. G. Xiao ◽  
Y. Zhang ◽  
X. C. Xia ◽  
J. Dubcovsky ◽  
...  
2012 ◽  
Vol 37 (11) ◽  
pp. 1917-1925 ◽  
Author(s):  
Fang-Ping YANG ◽  
Li-Ming HAN ◽  
Jun YAN ◽  
Xian-Chun XIA ◽  
Yong ZHANG ◽  
...  

2021 ◽  
Vol 22 (14) ◽  
pp. 7709
Author(s):  
Kyoungwon Cho ◽  
You-Ran Jang ◽  
Sun-Hyung Lim ◽  
Susan B. Altenbach ◽  
Yong Q. Gu ◽  
...  

The low-molecular weight glutenin subunit (LMW-GS) composition of wheat (Triticum aestivum) flour has important effects on end-use quality. However, assessing the contributions of each LMW-GS to flour quality remains challenging because of the complex LMW-GS composition and allelic variation among wheat cultivars. Therefore, accurate and reliable determination of LMW-GS alleles in germplasm remains an important challenge for wheat breeding. In this study, we used an optimized reversed-phase HPLC method and proteomics approach comprising 2-D gels coupled with liquid chromatography–tandem mass spectrometry (MS/MS) to discriminate individual LMW-GSs corresponding to alleles encoded by the Glu-A3, Glu-B3, and Glu-D3 loci in the ‘Aroona’ cultivar and 12 ‘Aroona’ near-isogenic lines (ARILs), which contain unique LMW-GS alleles in the same genetic background. The LMW-GS separation patterns for ‘Aroona’ and ARILs on chromatograms and 2-D gels were consistent with those from a set of 10 standard wheat cultivars for Glu-3. Furthermore, 12 previously uncharacterized spots in ‘Aroona’ and ARILs were excised from 2-D gels, digested with chymotrypsin, and subjected to MS/MS. We identified their gene haplotypes and created a 2-D gel map of LMW-GS alleles in the germplasm for breeding and screening for desirable LMW-GS alleles for wheat quality improvement.


2015 ◽  
Vol 48 (2) ◽  
pp. 51-60 ◽  
Author(s):  
Y. Shiri ◽  
M. Solouki ◽  
M. Forootan

AbstractIn order to study the allelic variation of Glu-1 gene (High molecular weight glutenin), 100 Iranian wheat cultivars including imported and domestic genotypes were analyzed using ALP-PCR technique. Four specific primer pairs were used based on the genetic loci of Glu-A1, Glu-B1, and Glu-D1 to perform the chain polymerase reactions. PCR reaction products were resolved on 2% agarose gel. Since allele “a” had the largest relative frequency (0.707), two alleles (a 344bp; b 362bp) were identified by P1-P2 primer for Glu-A1 locus. Three alleles (a 800bp; b 500bp; c 300bp) were detected for Glu-B1 locus by P5-P6 primer, and allele “b” was assumed as the highest relative frequency (0.618). Two primer pairs were applied for Glu-D1 locus. Ultimately, four alleles were identified, where allele “c” had the highest relative frequency (0.525). The observed genetic variation value for Glu-D1 locus (H=0.648) exhibits the maximal polymorphism. Using cluster analysis, the relationship between the observed polymorphism and geographical variation was investigated. The results indicated that there exists a remarkable variation in Glu- A1 locus between the Iranian wheat cultivars.


Agronomy ◽  
2020 ◽  
Vol 10 (8) ◽  
pp. 1075
Author(s):  
Mateusz Przyborowski ◽  
Sebastian Gasparis ◽  
Maciej Kała ◽  
Wacław Orczyk ◽  
Anna Nadolska-Orczyk

Wheat (Triticum aestivum L.) grain hardness is determined mainly by variations in puroindoline genes (Pina-D1 and Pinb-D1), which are located on the short arm of chromosome 5D. This trait has a direct effect on the technological properties of the flour and the final product quality. The objective of the study was to analyze the mutation frequency in both Pin genes and their influence on grain hardness in 118 modern bread wheat cultivars and breeding lines cultivated in Poland, and 80 landraces from Poland. The PCR products containing the Pin gene coding sequences were sequenced by the Sanger method. Based on detected the SNPs (single-nucleotide polymorphisms) we designed CAPS (cleaved amplified polymorphic sequence) markers for the fast screening of Pinb alleles in a large number of genotypes. All analyzed cultivars, breeding lines, and landraces possess the wild-type Pina-D1a allele. Allelic variation was observed within the Pinb gene. The most frequently occurring allele in modern wheat cultivars and breeding lines (over 50%) was Pinb-D1b. The contribution of the remaining alleles (Pinb-D1a, Pinb-D1c, and Pinb-D1d) was much less (approx. 15% each). In landraces, the most frequent allele was Pinb-D1a (over 70%), followed by Pinb-D1b (21% frequency). Pinb-D1c and Pinb-D1g were found in individual varieties. SKCS (single-kernel characterization system) analysis revealed that grain hardness was strictly connected with Pinb gene allelic variation in most tested cultivars. The mean grain hardness values were significantly greater in cultivars with mutant Pinb variants as compared to those with the wild-type Pinb-D1a allele. Based on grain hardness measured by SKCS, we classified the analyzed cultivars and lines into different classes according to a previously proposed classification system.


2019 ◽  
Vol 39 (4) ◽  
Author(s):  
Xiaoyan Li ◽  
Yin Li ◽  
Mengya Zhang ◽  
Xiaofen Yu ◽  
Rui Hu ◽  
...  

2010 ◽  
Vol 61 (9) ◽  
pp. 721 ◽  
Author(s):  
H. A. Eagles ◽  
Karen Cane ◽  
Haydn Kuchel ◽  
G. J. Hollamby ◽  
Neil Vallance ◽  
...  

Photoperiod and vernalization genes are important for the optimal adaptation of wheat to different environments. Diagnostic markers are now available for Vrn-A1, Vrn-B1, Vrn-D1 and Ppd-D1, with all four genes variable in southern Australian wheat-breeding programs. To estimate the effects of these genes on days to heading we used data from 128 field experiments spanning 24 years. From an analysis of 1085 homozygous cultivars and breeding lines, allelic variation for these four genes accounted for ~45% of the genotypic variance for days to heading. In the presence of the photoperiod-insensitive allele of Ppd-D1, differences between the winter genotype and genotypes with a spring allele at one of the genes ranged from 3.5 days for Vrn-B1 to 4.9 days for Vrn-D1. Smaller differences occurred between genotypes with a spring allele at one of the Vrn genes and those with spring alleles at two of the three genes. The shortest time to heading occurred for genotypes with spring alleles at both Vrn-A1 and Vrn-D1. Differences between the photoperiod-sensitive and insensitive alleles of Ppd-D1 depended on the genotype of the vernalization genes, being greatest when three spring alleles were present (11.8 days) and least when the only spring allele was at Vrn-B1 (3.7 days). Because of these epistatic interactions, for the practical purposes of using these genes for cross prediction and marker-assisted selection we concluded that using combinations of alleles of genes simultaneously would be preferable to summing effects of individual genes. The spring alleles of the vernalization genes responded differently to the accumulation of vernalizing temperatures, with the common spring allele of Vrn-A1 showing the least response, and the spring allele of Vrn-D1 showing a response that was similar to, but less than, a winter genotype.


Euphytica ◽  
2008 ◽  
Vol 165 (3) ◽  
pp. 445-452 ◽  
Author(s):  
F. P. Yang ◽  
X. K. Zhang ◽  
X. C. Xia ◽  
D. A. Laurie ◽  
W. X. Yang ◽  
...  

2012 ◽  
Vol 39 (11) ◽  
pp. 587-592 ◽  
Author(s):  
Cuiling Yuan ◽  
Hui Jiang ◽  
Honggang Wang ◽  
Kun Li ◽  
Heng Tang ◽  
...  

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