scholarly journals 1SF-04 Three-dimensional Cell Model for Tissue Morphogenesis(1SF Progress in the understanding of intracellular signaling networks of molecules,The 49th Annual Meeting of the Biophysical Society of Japan)

2011 ◽  
Vol 51 (supplement) ◽  
pp. S5
Author(s):  
Hisao Honda
2008 ◽  
Vol 48 (supplement) ◽  
pp. S78
Author(s):  
Junpei Hamatsu ◽  
Daisuke Sakakibara ◽  
Atsuko Sasaki ◽  
Teppei Ikeya ◽  
Masaki Mishima ◽  
...  

Molecules ◽  
2020 ◽  
Vol 25 (10) ◽  
pp. 2462 ◽  
Author(s):  
Aline Dias da Purificação ◽  
Nathalia Marins de Azevedo ◽  
Gabriel Guarany de Araujo ◽  
Robson Francisco de Souza ◽  
Cristiane Rodrigues Guzzo

The regulation of multiple bacterial phenotypes was found to depend on different cyclic dinucleotides (CDNs) that constitute intracellular signaling second messenger systems. Most notably, c-di-GMP, along with proteins related to its synthesis, sensing, and degradation, was identified as playing a central role in the switching from biofilm to planktonic modes of growth. Recently, this research topic has been under expansion, with the discoveries of new CDNs, novel classes of CDN receptors, and the numerous functions regulated by these molecules. In this review, we comprehensively describe the three main bacterial enzymes involved in the synthesis of c-di-GMP, c-di-AMP, and cGAMP focusing on description of their three-dimensional structures and their structural similarities with other protein families, as well as the essential residues for catalysis. The diversity of CDN receptors is described in detail along with the residues important for the interaction with the ligand. Interestingly, genomic data strongly suggest that there is a tendency for bacterial cells to use both c-di-AMP and c-di-GMP signaling networks simultaneously, raising the question of whether there is crosstalk between different signaling systems. In summary, the large amount of sequence and structural data available allows a broad view of the complexity and the importance of these CDNs in the regulation of different bacterial behaviors. Nevertheless, how cells coordinate the different CDN signaling networks to ensure adaptation to changing environmental conditions is still open for much further exploration.


2011 ◽  
Vol 51 (supplement) ◽  
pp. S67
Author(s):  
Ryuta Okada ◽  
Katsuo Ichinomiya ◽  
Yasushi Fujimoto ◽  
Katsuyuki Abe ◽  
Yoshihiro Ue ◽  
...  

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