Recurrence plot and machine learning for signal quality assessment of photoplethysmogram in mobile environment (Preprint)

2020 ◽  
Author(s):  
Donggeun Roh ◽  
Hangsik Shin
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Convolutional Neural Network ◽  
Quality Assessment ◽  
Feature Detection ◽  
Recurrence Plot ◽  
Classification Model ◽  
Signal Quality ◽  
Predictive Values

BACKGROUND In clinical use of photoplethysmogram, waveform distortion due to motion noise or low perfusion may lead to inaccurate analysis and diagnostic results. Therefore, it is necessary to find an appropriate analysis method to evaluate the signal quality of the photoplethysmogram so that its wide use in mobile healthcare can be further increased. OBJECTIVE The purpose of this study was to develop a machine learning model that could accurately evaluate the quality of a photoplethysmogram based on the shape of the photoplethysmogram and the phase relevance in a pulsatile waveform without requiring a complicated pre-processing. Its performance was then verified. METHODS Photoplethysmograms were recorded for 76 participants (5 minutes for each participant). All recorded photoplethysmograms were segmented for each beat to obtain a total of 49,561 pulsatile segments. These pulsatile segments were manually labeled as 'good' and 'bad' classes and converted to a two-dimensional phase space trajectory image with size of 124 × 124 using a recurrence plot. The classification model was implemented using a convolutional neural network with a two-layer structure. It was verified through a five-fold cross validation. RESULTS As a result, the proposed model correctly classified 48,827 segments out of 49,561 segments and misclassified 734 segments, showing a balanced accuracy of 0.975. Sensitivity, specificity, and positive predictive values of the developed model for the test dataset with a ‘bad’ class classification were 0.964, 0.987, and 0.848, respectively. The area under the curve was 0.994. CONCLUSIONS The convolutional neural network model with recurrence plot as input proposed in this study can be used for signal quality assessment as a generalized model with high accuracy through data expansion. It has an advantage in that it does not require a complicated pre-processing or feature detection process. CLINICALTRIAL KCT0002080

Recurrence plot and convolutional neural network-based signal quality assessment method for using photoplethysmogram in mobile environment (Preprint)

2020 ◽  
Author(s):  
Hangsik Shin
Keyword(s):  
Neural Network ◽  
Convolutional Neural Network ◽  
Quality Assessment ◽  
Feature Detection ◽  
Layer Structure ◽  
Recurrence Plot ◽  
Classification Model ◽  
Signal Quality ◽  
Predictive Values

BACKGROUND In clinical use of photoplethysmogram, waveform distortion due to motion noise or low perfusion may lead to inaccurate analysis and diagnostic results. Therefore, it is necessary to find an appropriate analysis method to evaluate the signal quality of the photoplethysmogram so that its wide use in mobile healthcare can be further increased. OBJECTIVE The purpose of this study was to develop a machine learning model that could accurately evaluate the quality of a photoplethysmogram based on the shape of the photoplethysmogram and the phase relevance in a pulsatile waveform without requiring a complicated pre-processing. Its performance was then verified. METHODS Photoplethysmograms were recorded for 76 participants (5 minutes for each participant). All recorded photoplethysmograms were segmented for each beat to obtain a total of 49,561 pulsatile segments. These pulsatile segments were manually labeled as 'good' and 'bad' classes and converted to a two-dimensional phase space trajectory image with size of 124 × 124 using a recurrence plot. The classification model was implemented using a convolutional neural network with a two-layer structure. It was verified through a five-fold cross validation. RESULTS As a result, the proposed model correctly classified 48,827 segments out of 49,561 segments and misclassified 734 segments, showing a balanced accuracy of 0.975. Sensitivity, specificity, and positive predictive values of the developed model for the test dataset with a ‘bad’ class classification were 0.964, 0.987, and 0.848, respectively. The area under the curve was 0.994. CONCLUSIONS The convolutional neural network model with recurrence plot as input proposed in this study can be used for signal quality assessment as a generalized model with high accuracy through data expansion. It has an advantage in that it does not require a complicated pre-processing or feature detection process. CLINICALTRIAL KCT0002080

scholarly journals Recurrence Plot and Machine Learning for Signal Quality Assessment of Photoplethysmogram in Mobile Environment

Sensors ◽  
2021 ◽  
Vol 21 (6) ◽  
pp. 2188
Author(s):  
Donggeun Roh ◽  
Hangsik Shin
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Convolutional Neural Network ◽  
Quality Assessment ◽  
Feature Detection ◽  
Layer Structure ◽  
Recurrence Plot ◽  
Classification Model ◽  
Signal Quality ◽  
Predictive Values

The purpose of this study was to develop a machine learning model that could accurately evaluate the quality of a photoplethysmogram based on the shape of the photoplethysmogram and the phase relevance in a pulsatile waveform without requiring complicated pre-processing. Photoplethysmograms were recorded for 76 participants (5 min for each participant). All recorded photoplethysmograms were segmented for each beat to obtain a total of 49,561 pulsatile segments. These pulsatile segments were manually labeled as ‘good’ and ‘poor’ classes and converted to a two-dimensional phase space trajectory image using a recurrence plot. The classification model was implemented using a convolutional neural network with a two-layer structure. As a result, the proposed model correctly classified 48,827 segments out of 49,561 segments and misclassified 734 segments, showing a balanced accuracy of 0.975. Sensitivity, specificity, and positive predictive values of the developed model for the test dataset with a ‘poor’ class classification were 0.964, 0.987, and 0.848, respectively. The area under the curve was 0.994. The convolutional neural network model with recurrence plot as input proposed in this study can be used for signal quality assessment as a generalized model with high accuracy through data expansion. It has an advantage in that it does not require complicated pre-processing or a feature detection process.

scholarly journals Improving Water Quality Assessment through Anomaly Detection Using Hybrid Convolutional Neural Network Approach

2021 ◽  
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Water Quality ◽  
Deep Learning ◽  
Anomaly Detection ◽  
Convolutional Neural Network ◽  
Quality Assessment ◽  
Water Quality Assessment ◽  
Machine Learning Algorithms ◽  
Quality Analysis

<p>Water being a precious commodity for every person around the world needs to be quality monitored continuously for ensuring safety whilst usage. The water data collected from sensors in water plants are used for water quality assessment. The anomaly present in the water data seriously affects the performance of water quality assessment. Hence it needs to be addressed. In this regard, water data collected from sensors have been subjected to various anomaly detection approaches guided by Machine Learning (ML) and Deep Learning framework. Standard machine learning algorithms have been used extensively in water quality analysis and these algorithms in general converge quickly. Considering the fact that manual feature selection has to be done for ML algorithms, Deep Learning (DL) algorithm is proposed which involve implicit feature learning. A hybrid model is formulated that takes advantage of both and presented it is data invariant too. This novel Hybrid Convolutional Neural Network (CNN) and Extreme Learning Machine (ELM) approach is used to detect presence of anomalies in sensor collected water data. The experiment of the proposed CNN-ELM model is carried out using the publicly available dataset GECCO 2019. The findings proved that the model has improved the water quality assessment of the sensor water data collected by detecting the anomalies efficiently and achieves F1 score of 0.92. This model can be implemented in water quality assessment.</p>

Detection of Epileptic Seizure Using Pretrained Deep Convolutional Neural Network and Transfer Learning

2020 ◽  
Vol 83 (6) ◽  
pp. 602-614
Author(s):  
Hidir Selcuk Nogay ◽  
Hojjat Adeli
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Convolutional Neural Network ◽  
Transfer Learning ◽  
Epileptic Seizure ◽  
Binary Classification ◽  
Classification Model ◽  
Automatic Identification ◽  
Eeg Signal ◽  
Data Set

<b><i>Introduction:</i></b> The diagnosis of epilepsy takes a certain process, depending entirely on the attending physician. However, the human factor may cause erroneous diagnosis in the analysis of the EEG signal. In the past 2 decades, many advanced signal processing and machine learning methods have been developed for the detection of epileptic seizures. However, many of these methods require large data sets and complex operations. <b><i>Methods:</i></b> In this study, an end-to-end machine learning model is presented for detection of epileptic seizure using the pretrained deep two-dimensional convolutional neural network (CNN) and the concept of transfer learning. The EEG signal is converted directly into visual data with a spectrogram and used directly as input data. <b><i>Results:</i></b> The authors analyzed the results of the training of the proposed pretrained AlexNet CNN model. Both binary and ternary classifications were performed without any extra procedure such as feature extraction. By performing data set creation from short-term spectrogram graphic images, the authors were able to achieve 100% accuracy for binary classification for epileptic seizure detection and 100% for ternary classification. <b><i>Discussion/Conclusion:</i></b> The proposed automatic identification and classification model can help in the early diagnosis of epilepsy, thus providing the opportunity for effective early treatment.

scholarly journals Impact of Training Sample Size on the Effects of Regularization in a Convolutional Neural Network-based Dental X-ray Artifact Prediction Model

2020 ◽  
Vol 14 (1) ◽  
pp. 5
Author(s):  
Adam Adli ◽  
Pascal Tyrrell
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Convolutional Neural Network ◽  
Sample Size ◽  
Training Sample ◽  
Training Data ◽  
Classification Model ◽  
Sample Sizes ◽  
X Ray ◽  
Training Sample Size

Introduction: Advances in computers have allowed for the practical application of increasingly advanced machine learning models to aid healthcare providers with diagnosis and inspection of medical images. Often, a lack of training data and computation time can be a limiting factor in the development of an accurate machine learning model in the domain of medical imaging. As a possible solution, this study investigated whether L2 regularization moderate s the overfitting that occurs as a result of small training sample sizes.Methods: This study employed transfer learning experiments on a dental x-ray binary classification model to explore L2 regularization with respect to training sample size in five common convolutional neural network architectures. Model testing performance was investigated and technical implementation details including computation times and hardware considerations as well as performance factors and practical feasibility were described.Results: The experimental results showed a trend that smaller training sample sizes benefitted more from regularization than larger training sample sizes. Further, the results showed that applying L2 regularization did not apply significant computational overhead and that the extra rounds of training L2 regularization were feasible when training sample sizes are relatively small.Conclusion: Overall, this study found that there is a window of opportunity in which the benefits of employing regularization can be most cost-effective relative to training sample size. It is recommended that training sample size should be carefully considered when forming expectations of achievable generalizability improvements that result from investing computational resources into model regularization.

scholarly journals A Deep Convolutional Neural Network-Based Multi-Class Image Classification for Automatic Wafer Map Failure Recognition in Semiconductor Manufacturing

2021 ◽  
Vol 11 (20) ◽  
pp. 9769
Author(s):  
Huilin Zheng ◽  
Syed Waseem Abbas Sherazi ◽  
Sang Hyeok Son ◽  
Jong Yun Lee
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Manufacturing Process ◽  
Semiconductor Manufacturing ◽  
Prediction Models ◽  
Deep Convolutional Neural Network ◽  
Classification Model ◽  
Boosted Decision Trees

Wafer maps provide engineers with important information about the root causes of failures during the semiconductor manufacturing process. Through the efficient recognition of the wafer map failure pattern type, the semiconductor manufacturing process and its product performance can be improved, as well as reducing the product cost. Therefore, this paper proposes an accurate model for the automatic recognition of wafer map failure types using a deep learning-based convolutional neural network (DCNN). For this experiment, we use WM811K, which is an open-source real-time wafer map dataset containing wafer map images of nine failure classes. Our research contents can be briefly summarized as follows. First, we use random sampling to extract 500 images from each class of the original image dataset. Then we propose a deep convolutional neural network model to generate a multi-class classification model. Lastly, we evaluate the performance of the proposed prediction model and compare it with three other popular machine learning-based models—logistic regression, random forest, and gradient boosted decision trees—and several well-known deep learning models—VGGNet, ResNet, and EfficientNet. Consequently, the comprehensive analysis showed that the performance of the proposed DCNN model outperformed those of other popular machine learning and deep learning-based prediction models.

Convolutional Neural Network for Customer’s Opinion on Amazon Products

2019 ◽  
Vol 8 (3) ◽  
pp. 6634-6643 ◽  
Keyword(s):  
Neural Network ◽  
Convolutional Neural Network ◽  
Sentiment Analysis ◽  
Latent Dirichlet Allocation ◽  
Opinion Mining ◽  
Text Documents ◽  
Customer Churn ◽  
Learning Classifier ◽  
Review Spam

Opinion mining and sentiment analysis are valuable to extract the useful subjective information out of text documents. Predicting the customer’s opinion on amazon products has several benefits like reducing customer churn, agent monitoring, handling multiple customers, tracking overall customer satisfaction, quick escalations, and upselling opportunities. However, performing sentiment analysis is a challenging task for the researchers in order to find the users sentiments from the large datasets, because of its unstructured nature, slangs, misspells and abbreviations. To address this problem, a new proposed system is developed in this research study. Here, the proposed system comprises of four major phases; data collection, pre-processing, key word extraction, and classification. Initially, the input data were collected from the dataset: amazon customer review. After collecting the data, preprocessing was carried-out for enhancing the quality of collected data. The pre-processing phase comprises of three systems; lemmatization, review spam detection, and removal of stop-words and URLs. Then, an effective topic modelling approach Latent Dirichlet Allocation (LDA) along with modified Possibilistic Fuzzy C-Means (PFCM) was applied to extract the keywords and also helps in identifying the concerned topics. The extracted keywords were classified into three forms (positive, negative and neutral) by applying an effective machine learning classifier: Convolutional Neural Network (CNN). The experimental outcome showed that the proposed system enhanced the accuracy in sentiment analysis up to 6-20% related to the existing systems.

scholarly journals Effectiveness of transfer learning for enhancing tumor classification with a convolutional neural network on frozen sections

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Young-Gon Kim ◽  
Sungchul Kim ◽  
Cristina Eunbee Cho ◽  
In Hye Song ◽  
Hee Jin Lee ◽  
...  
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Transfer Learning ◽  
Frozen Section ◽  
Medical Center ◽  
External Validation ◽  
Model Performance ◽  
Classification Model ◽  
Training Dataset

AbstractFast and accurate confirmation of metastasis on the frozen tissue section of intraoperative sentinel lymph node biopsy is an essential tool for critical surgical decisions. However, accurate diagnosis by pathologists is difficult within the time limitations. Training a robust and accurate deep learning model is also difficult owing to the limited number of frozen datasets with high quality labels. To overcome these issues, we validated the effectiveness of transfer learning from CAMELYON16 to improve performance of the convolutional neural network (CNN)-based classification model on our frozen dataset (N = 297) from Asan Medical Center (AMC). Among the 297 whole slide images (WSIs), 157 and 40 WSIs were used to train deep learning models with different dataset ratios at 2, 4, 8, 20, 40, and 100%. The remaining, i.e., 100 WSIs, were used to validate model performance in terms of patch- and slide-level classification. An additional 228 WSIs from Seoul National University Bundang Hospital (SNUBH) were used as an external validation. Three initial weights, i.e., scratch-based (random initialization), ImageNet-based, and CAMELYON16-based models were used to validate their effectiveness in external validation. In the patch-level classification results on the AMC dataset, CAMELYON16-based models trained with a small dataset (up to 40%, i.e., 62 WSIs) showed a significantly higher area under the curve (AUC) of 0.929 than those of the scratch- and ImageNet-based models at 0.897 and 0.919, respectively, while CAMELYON16-based and ImageNet-based models trained with 100% of the training dataset showed comparable AUCs at 0.944 and 0.943, respectively. For the external validation, CAMELYON16-based models showed higher AUCs than those of the scratch- and ImageNet-based models. Model performance for slide feasibility of the transfer learning to enhance model performance was validated in the case of frozen section datasets with limited numbers.

scholarly journals Nodule Detection with Convolutional Neural Network Using Apache Spark and GPU Frameworks

2021 ◽  
Vol 11 (6) ◽  
pp. 2838
Author(s):  
Nikitha Johnsirani Venkatesan ◽  
Dong Ryeol Shin ◽  
Choon Sung Nam
Keyword(s):  
Neural Network ◽  
Radiation Dose ◽  
Convolutional Neural Network ◽  
Model Performance ◽  
Performance Comparison ◽  
Apache Spark ◽  
Training Time ◽  
Learning Framework ◽  
Proposed Model

In the pharmaceutical field, early detection of lung nodules is indispensable for increasing patient survival. We can enhance the quality of the medical images by intensifying the radiation dose. High radiation dose provokes cancer, which forces experts to use limited radiation. Using abrupt radiation generates noise in CT scans. We propose an optimal Convolutional Neural Network model in which Gaussian noise is removed for better classification and increased training accuracy. Experimental demonstration on the LUNA16 dataset of size 160 GB shows that our proposed method exhibit superior results. Classification accuracy, specificity, sensitivity, Precision, Recall, F1 measurement, and area under the ROC curve (AUC) of the model performance are taken as evaluation metrics. We conducted a performance comparison of our proposed model on numerous platforms, like Apache Spark, GPU, and CPU, to depreciate the training time without compromising the accuracy percentage. Our results show that Apache Spark, integrated with a deep learning framework, is suitable for parallel training computation with high accuracy.

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