Exploitation of endophytic Pseudomonas sp. for plant growth promotion and colonization in rice

The present investigation was carried out to exploit bacterial endophytes associated with root and leaf tissue of rice plant for plant growth promotion (PGP) and colonization study in vitro. Total 10 endophytic bacterial isolates (Pseudomonas sp.) were evaluate for PGP traits like P solubilization, production of Indole acetic acid (IAA), siderophore, ACC deaminase, protease, cellulase, fluorescent pigment, urease and denitrification activity. Out of 10 endophytic bacteria 30 %, 60 %, 20 %, 70 %, 10 % and 10 % were positive for siderophore, protease, cellulase, fluorescent pigment, urease and denitrification respectively. Maximum IAA production was recorded with isolate LRBLE7 (18.8 μgml-1) followed by LRBRE4 (16.0 μgml-1) and maximum P-solubilization was recorded with isolate LRBRE4 (5.8 mg 100 ml-1) followed by LRBLE7 (4.4 mg 100 ml-1). ACC deaminase production was recorded with isolate LRBLE6 (O.D=0.352 nm) followed by LRBRE5 (O.D=0.324nm). Three potential isolates (LRBRE4, LRBRE6 and LRBLE7) were selected on the basis of multiple PGP traits and were subjected to colonization study of rice seedling in vitro. Potential bacterial isolates can be exploited for improving growth and productivity in rice under sustainable management system.

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Enhancement of verticillium wilt resistance in tomato transplants by in vitro co-culture of seedlings with a plant growth promoting rhizobacterium (Pseudomonas sp. strain PsJN)

Canadian Journal of Microbiology ◽

10.1139/w98-017 ◽

1998 ◽

Vol 44 (6) ◽

pp. 528-536 ◽

Cited By ~ 67

Author(s):

V K Sharma ◽

J Nowak

Keyword(s):

Plant Growth ◽

Verticillium Wilt ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Disease Suppression ◽

Pseudomonas Sp ◽

Plant Growth Promoting ◽

Growth Promoting

The potential utilization of a plant growth promoting rhizobacterium, Pseudomonas sp. strain PsJN, to enhance the resistance of tomato transplants to verticillium wilt was investigated. Plant growth and disease development were tested on the disease-susceptible cultivar Bonny Best after Verticillium dahliae infection of tissue culture plantlets bacterized in vitro (by co-culturing with the bacterium) and seedlings bacterized in vivo (after 3 weeks growth in the greenhouse). Significant differences in both disease suppression and plant growth were obtained between in vitro bacterized and nonbacterized (control) plants. The degree of protection afforded by in vitro bacterization depended on the inoculum density of V. dahliae; the best and worst protection occurred at the lowest (103 conidia ·mL-1) and highest (106 conidia ·mL-1) levels, respectively. In contrast, the in vivo bacterized tomatoes did not show plant growth promotion when compared to the nonbacterized control plants. When challenged with Verticillium, significant growth differences between in vivo bacterized plants (26.8% for shoot height) and nonbacterized controls were only seen at the 3rd week after inoculation. Compared with the in vitro inoculation, there was no delay in the verticillium wilt symptom expression, even at the lowest concentration of V. dahliae, by in vivo PsJN inoculation. These results suggest that endophytic colonization of tomato tissues is required for the Verticillium-resistance responses. Plant growth promotion preceeds the disease-resistance responses and may depend on the colonization thresholds and subsequent sensitization of hosts.Key words: Pseudomonas sp., plant growth promoting rhizobacterium, Verticillium dahliae, tomato, colonization, plant growth promotion, disease suppression.

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Inoculum density, temperature, and genotype effects on in vitro growth promotion and epiphytic and endophytic colonization of tomato (Lycopersicon esculentum L.) seedlings inoculated with a pseudomonad bacterium

Canadian Journal of Microbiology ◽

10.1139/m97-049 ◽

1997 ◽

Vol 43 (4) ◽

pp. 354-361 ◽

Cited By ~ 135

Author(s):

V. K. Pillay ◽

J. Nowak

Keyword(s):

Lycopersicon Esculentum ◽

Plant Growth ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Bacterial Colonization ◽

Root Surface ◽

Inoculum Density ◽

Dual Culture ◽

Pseudomonas Sp

The effects of inoculum density (0, 4.6 × 107, 4.2 × 108, and 8.8 × 108 cfu∙mL−1), temperature (10, 20, and 30 °C), and plant genotype (cultivars Celebrity, Blazer, Scotia, and Mountain Delight) on bacterial colonization and plant growth promotion were investigated in a gnotobiotic system. An in vitro dual culture of tomato (Lycopersicon esculentum L.) plantlets and a Pseudomonas sp., strain PsJN, were used. Epiphytic (external) and endophytic (internal) bacterial populations were determined to evaluate plantlet colonization. Shoot and root biomass of bacterized plantlets was significantly higher (p ≤ 0.05) than that of nonbacterized controls. Growth promotion was best with inoculum densities of 3 × 108 – 7 × 108 cfu∙mL−1 at 20 °C, particularly in the early maturing cultivars Blazer and Scotia. Lower inoculum densities were required to maximize root growth (approximately 1 × 108 cfu∙mL−1) than shoot growth (approximately 3 × 108 cfu∙mL−1). Shoot surface populations did not vary with inoculum density or temperature, but the bacterium colonized the shoot exterior of cultivars Celebrity, Mountain Delight, and Scotia better than cultivar Blazer. The root surface populations increased linearly with increasing inoculum density (within a range of 107–108 cfu∙mL−1), decreased with increasing temperatures (from 10 to 30 °C), and were higher for the main season cultivar Celebrity than for cultivars Blazer, Scotia, and Mountain Delight. Populations of shoot endophytes did not vary with initial inoculum density or genotype but were affected by temperature; the highest colonization was at 10 °C. The number of root endophytes was also highest at 10 °C at the inoculum density of approximately 4 × 108 cfu∙mL−1 and did not vary with genotypes. The experiments clearly indicate that there was no relationship between root surface colonization and plant growth promotion. However, the range of inoculum levels (3 × 108 – 7 × 108 cfu∙mL−1) that promoted colonization of the inner root tissues (endophytic) also best promoted plant growth. A possible biostimulation threshold within the tissues of the inoculated plants under conditions favourable to the growth of tomato is proposed.Key words: Pseudomonas sp., tomato, colonization, growth promotion.

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Biological Control of Chili Damping-Off Disease, Caused by Pythium myriotylum

Frontiers in Microbiology ◽

10.3389/fmicb.2021.587431 ◽

2021 ◽

Vol 12 ◽

Author(s):

Sajjad Hyder ◽

Amjad Shahzad Gondal ◽

Zarrin Fatima Rizvi ◽

Rashida Atiq ◽

Muhammad Irtaza Sajjad Haider ◽

...

Keyword(s):

Plant Growth ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Disease Suppression ◽

Root Weight ◽

Dual Culture ◽

Bacterial Isolates ◽

Damping Off ◽

Pythium Myriotylum ◽

Pgp Traits

Pythium myriotylum is a notorious soil-borne oomycete that causes post-emergence damping-off in chili pepper. Of various disease management strategies, utilization of plant growth promoting rhizobacteria (PGPR) in disease suppression and plant growth promotion is an interesting strategy. The present study was performed to isolate and characterize PGPR indigenous to the chili rhizosphere in Pakistan, and to test the potential to suppress the damping-off and plant growth promotion in chili. Out of a total of 28 antagonists, eight bacterial isolates (4a2, JHL-8, JHL-12, 1C2, RH-24, 1D, 5C, and RH-87) significantly suppressed the colony growth of P. myriotylum in a dual culture experiment. All the tested bacterial isolates were characterized for biochemical attributes, and 16S rRNA sequence based phylogenetic analysis identified these isolates as Flavobacterium spp., Bacillus megaterium, Pseudomonas putida, Bacillus cereus, and Pseudomonas libanensis. All the tested bacterial isolates showed positive test results for ammonia production, starch hydrolase (except 4a2), and hydrogen cyanide production (except 4a2 and 1D). All the tested antagonists produced indole-3-acetic acid (13.4–39.0 μg mL–1), solubilized inorganic phosphate (75–103 μg mL–1), and produced siderophores (17.1–23.7%) in vitro. All the tested bacterial isolates showed varying levels of susceptibility and resistance response against different antibiotics and all these bacterial isolates were found to be non-pathogenic to chili seeds and notably enhanced percentage seed germination, plumule, redical length, and vigor index over un-inoculated control. Additionally, under pathogen pressure, bacterization increased the defense related enzymes such as Peroxidase (PO), polyphenol oxidase (PPO), and phenylalanine ammonia-lyase (PAL) activates. Moreover, the treatment of chili seeds with these bacterial isolates significantly suppressed the damping-off caused by P. myriotylum and improved PGP traits compared to the control. In addition, a positive correlation was noticed between shoot, root length, and dry shoot and root weight, and there was a negative correlation between dry shoot, root weight, and seedling percentage mortality. These results showed that native PGPR possesses multiple traits beneficial to the chili plants and can be used to develop eco-friendly and effective seed treatment formulation as an alternative to synthetic chemical fungicides.

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Biological control of chili damping off disease, caused by Pythium myriotylum

10.1101/2020.07.28.224519 ◽

2020 ◽

Author(s):

Sajjad Hyder ◽

Amjad Shahzad Gondal ◽

Zarrin Fatima Rizvi ◽

Muhammad Irtaza Sajjad Haider ◽

Muhammad Inam-ul-Haq

Keyword(s):

Plant Growth ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Disease Suppression ◽

Root Weight ◽

Dual Culture ◽

Bacterial Isolates ◽

Damping Off ◽

Pythium Myriotylum ◽

Pgp Traits

ABSTRACTPythium myriotylum is a notorious soil-borne oomycete causes post-emergence damping off in chilli pepper. Of various disease management strategies, utilization of plant growth promoting rhizobacteria (PGPR) in disease suppression and plant growth promotion is eye catching strategy. The present study was performed to isolate and characterize PGPR indigenous to chili rhizosphere in Pakistan, and to test their potential to suppress damping off and plant growth promotion in chilli. Out of total 28 antagonists, 8 bacterial isolates (4a2, JHL-8, JHL-12, 1C2, RH-24, 1D, 5C and RH-87) significantly suppressed the colony growth of P. myriotylum in dual culture experiment. All the tested bacterial isolates were characterized for biochemical attributes, and 16S rRNA sequence based phylogenetic analysis identified these isolates as Flavobacterium spp., Bacillus megaterium, Pseudomonas putida, Bacillus cereus and Pseudomonas libanensis. All the tested bacterial isolates showed positive test results for ammonia production, starch hydrolase (except 4a2), and hydrogen cyanide production (except 4a2 and 1D). All the tested antagonists produced indole-3-acetic acid (13.4-39.0 μg ml−1), solubilized inorganic phosphate (75–103 μgml-1) and produced siderophores (17.1–23.7%) in vitro. All the tested bacterial isolates showed varied level of susceptibility and resistance response against different antibiotics and all these bacterial isolates were found non-pathogenic to chill seeds and notably enhanced percentage seed germination, plumule, redical length and vigor index over un-inoculated control. Additionally, under pathogen pressure, bacterization increased the defense related enzymes (PO, PPO and PAL) activates. Moreover, chilli seeds treatment with these bacterial isolates significantly suppressed damping-off caused by P. myriotylum, and improved PGP traits as compared to control. In addition, a positive correlation was noticed between shoot, root length and dry shoot and root weigh and a negative correlation was seen between dry shoot, root weight and seedling percentage mortality. These results showed that native PGPR possess multiple traits beneficial to the chilli plants and can be used to develop eco-friendly and effective seed treatment formulation as an alternative to synthetic chemical fungicides.

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Diazotrophic bacteria from maize exhibit multifaceted plant growth promotion traits in multiple hosts

10.1101/2020.05.17.100859 ◽

2020 ◽

Author(s):

Shawn M. Higdon ◽

Tania Pozzo ◽

Emily J. Tibbett ◽

Colleen Chiu ◽

Richard Jeannotte ◽

...

Keyword(s):

Plant Growth ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Genomic Analysis ◽

Comparative Genomic ◽

Marker Genes ◽

Diazotrophic Bacteria ◽

In Planta ◽

Pgp Traits

AbstractSierra Mixe maize is a geographically remote landrace variety grown on nitrogen-deficient fields in Oaxaca, Mexico that meets its nutritional requirements without synthetic fertilizer by associating with free-living diazotrophs comprising the microbiota of its aerial root mucilage. We selected nearly 500 diazotrophic bacteria isolated from Sierra Mixe maize mucilage and sequenced their genomes. Comparative genomic analysis demonstrated that isolates represented diverse genera and possessed multiple marker genes for mechanisms of direct plant growth promotion (PGP). In addition to nitrogen fixation, we examined deamination of 1-amino-1-cyclopropanecarboxylic acid, biosynthesis of indole-3-acetic acid, and phosphate solubilization. Implementing in vitro colorimetric assays revealed each isolate’s potential to confer the alternative PGP activities that corroborated genotype and pathway content. We examined the ability of mucilage diazotrophs to confer PGP by direct inoculation of clonally propagated potato plants in planta, which led to the identification of bio-stimulant candidates that were tested for PGP by inoculating a conventional maize variety. The results indicate that, while many diazotrophic isolates from Sierra Mixe maize possessed genotypes and in vitro phenotypes for targeted PGP traits, a subset of these organisms promoted the growth of potato and conventional maize using multiple promotion mechanisms.

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Genomic Analysis of the 1-Aminocyclopropane-1-Carboxylate Deaminase-Producing Pseudomonas thivervalensis SC5 Reveals Its Multifaceted Roles in Soil and in Beneficial Interactions With Plants

Frontiers in Microbiology ◽

10.3389/fmicb.2021.752288 ◽

2021 ◽

Vol 12 ◽

Author(s):

Francisco X. Nascimento ◽

Paola Urón ◽

Bernard R. Glick ◽

Admir Giachini ◽

Márcio J. Rossi

Keyword(s):

Biological Control ◽

Plant Growth ◽

Pseudomonas Syringae ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Genomic Analysis ◽

Acc Deaminase ◽

Quorum Quenching ◽

Cucumber Plant

Beneficial 1-aminocyclopropane-1-carboxylate (ACC) deaminase-producing bacteria promote plant growth and stress resistance, constituting a sustainable alternative to the excessive use of chemicals in agriculture. In this work, the increased plant growth promotion activity of the ACC deaminase-producing Pseudomonas thivervalensis SC5, its ability to limit the growth of phytopathogens, and the genomics behind these important properties are described in detail. P. thivervalensis SC5 displayed several active plant growth promotion traits and significantly increased cucumber plant growth and resistance against salt stress (100mmol/L NaCl) under greenhouse conditions. Strain SC5 also limited the in vitro growth of the pathogens Botrytis cinerea and Pseudomonas syringae DC3000 indicating active biological control activities. Comprehensive analysis revealed that P. thivervalensis SC5 genome is rich in genetic elements involved in nutrient acquisition (N, P, S, and Fe); osmotic stress tolerance (e.g., glycine-betaine, trehalose, and ectoine biosynthesis); motility, chemotaxis and attachment to plant tissues; root exudate metabolism including the modulation of plant phenolics (e.g., hydroxycinnamic acids), lignin, and flavonoids (e.g., quercetin); resistance against plant defenses (e.g., reactive oxygens species-ROS); plant hormone modulation (e.g., ethylene, auxins, cytokinins, and salicylic acid), and bacterial and fungal phytopathogen antagonistic traits (e.g., 2,4-diacetylphloroglucinol, HCN, a fragin-like non ribosomal peptide, bacteriocins, a lantipeptide, and quorum-quenching activities), bringing detailed insights into the action of this versatile plant-growth-promoting bacterium. Ultimately, the combination of both increased plant growth promotion/protection and biological control abilities makes P. thivervalensis SC5 a prime candidate for its development as a biofertilizer/biostimulant/biocontrol product. The genomic analysis of this bacterium brings new insights into the functioning of Pseudomonas and their role in beneficial plant-microbe interactions.

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Isolation of plant growth-promoting Pseudomonas sp. PPR8 from the rhizosphere of Phaseolus vulgaris L.

Archives of Biological Sciences ◽

10.2298/abs150701028k ◽

2016 ◽

Vol 68 (2) ◽

pp. 363-374 ◽

Cited By ~ 4

Author(s):

Pankaj Kumar ◽

Ramesh Dubey ◽

Dinesh Maheshwari ◽

Yong-Ha Park ◽

Vivek Bajpai

Keyword(s):

Phaseolus Vulgaris ◽

Plant Growth ◽

Growth Promotion ◽

Rrna Gene ◽

Sequencing Analysis ◽

Pseudomonas Sp ◽

Pgp Traits ◽

Plant Growth Promoting ◽

Growth Promoting

In vitro screening of plant growth-promoting (PGP) traits was carried out using eight Pseudomonas spp., PPR1 to PPR8, isolated from the rhizosphere of Phaseolus vulgaris growing on the Uttarakhand Himalayan range in India. All the isolates were fast growers, positive for catalase, oxidase and urease activities, and utilized lactose and some amino acids. All the isolates were indole acetic acid (IAA) positive, however PPR8 solubilized potassium and zinc along with various other types of inorganic (tricalcium, dicalcium and zinc phosphate) and organic (calcium phytate) phosphates, as well as producing siderophore and ACC deaminase. PPR8 also produced cyanogens, extracellular chitinase, ?-1,3-glucanase, ?-1,4-glucanase and oxalate oxidase. Based on the PGP traits of all isolates, PPR8 was found to be the most potent plant growth-promoting rhizobacteria (PGPR). Further, PPR8 was identified as Pseudomonas sp. PPR8, based on 16S rRNA gene sequencing analysis. Moreover, the PGP activities of PPR8 confirmed it to be a potent biocontrol agent, inhibiting the growth of various plant pathogenic fungi. This study reveals the potential of Pseudomonas sp. PPR8 to be used as a good bioinoculant for growth promotion of common bean and for the protection of important legume crops from various deleterious phytopathogens.

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Potential Screening of Indigenous Drought Stress Tolerant Bacteria for Plant Growth Promotion (PGP) Traits: An In-vitro Study

International Research Journal of Pure and Applied Chemistry ◽

10.9734/irjpac/2021/v22i330392 ◽

2021 ◽

pp. 8-21

Author(s):

B. Prasanna Kumar ◽

N. Trimurtulu ◽

A. Vijaya Gopal

Keyword(s):

Polyethylene Glycol ◽

Drought Stress ◽

Plant Growth ◽

Plant Growth Promotion ◽

Growth Promotion ◽

Moisture Stress ◽

Bacterial Isolates ◽

Biochemical Tests ◽

Polyethylene Glycol 6000

Aims: The study aims to formulate relevant microbial consortia against drought stress mitigation with potential drought stress tolerant bacterial isolates by polyethylene glycol 6000 (PEG 6000) different moisture stress levels to mitigate the drought stress which can finally helpful to increase plant and soil health under adverse stress conditions. Study Design: Source of rhizosphere soil samples from groundnut drought prone areas of Andhra Pradesh. Place and Duration of Study: Department of Agricultural Microbiology, Advanced Post Graduate Centre, Acharya N.G Ranga Agricultural University, Lam, Guntur, 522 034, between June 2017 and July 2020. Methodology: Isolated strains were also tested for further drought stress screening by polyethylene glycol 6000 In-vitro screening was done for different plant growth promotion activities i.e. phosphate solubilization, IAA production, ammonia production, ACC deaminase activity, HCN production and catalase. HCN production, catalase positive, colony morphology, Gram staining and biochemical tests. Results: Fifty-one efficient bacterial isolates were obtained from drought prone rhizosphere soils of groundnut. Isolated strains were also tested for further drought stress screening by polyethylene glycol 6000 at 0% (-0.05 MPa), 10% (-0.65 MPa), 20% (-1.57 MPa), 30% (-2.17 MPa) and 40% (-2.70 MPa). Thirty-seven bacterial isolates were further found to have an enzyme 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity which improved plant growth during stress conditions. The In-vitro screening was done for different plant growth promotion activities, twelve bacterial isolates were positive for phosphate solubilization. IAA production was shown by almost all the bacterial isolates. Three isolates were positive for ammonia production. Two isolates were positive for HCN production and all the isolates were found to be catalase positive. Seven isolates were showing maximum plant growth promotion activities and further identified based on colony morphology, Gram staining and biochemical tests. Conclusion: This study suggests that 51 bacterial isolates exhibited the highest tolerance to moisture stress under In-vitro, these are screened and considered as potential isolates against plant growth promoting characteristics. Plant growth promoting bacteria that can modulate physiological response for water shortage, enhanced water or nutrient uptake and transpiration, induction of plant growth hormone signaling and increased antioxidase activity and photosynthetic rate thereby ensuring plant survival under such stressful conditions. In regard to isolates having PGP properties from the research work presented could be studied further under In-vitro and in vivo conditions from different soils with several crops for confirming their use as bio inoculants.

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Alleviation of Salt Stress in Wheat Seedlings via Multifunctional Bacillus aryabhattai PM34: An In-Vitro Study

Sustainability ◽

10.3390/su13148030 ◽

2021 ◽

Vol 13 (14) ◽

pp. 8030

Author(s):

Shehzad Mehmood ◽

Amir Abdullah Khan ◽

Fuchen Shi ◽

Muhammad Tahir ◽

Tariq Sultan ◽

...

Keyword(s):

Salt Stress ◽

Plant Growth ◽

Stress Tolerance ◽

Bacterial Strain ◽

Acc Deaminase ◽

Wheat Growth ◽

Wheat Seedlings ◽

Pgp Traits ◽

Bacillus Aryabhattai

Plant growth-promoting rhizobacteria play a substantial role in plant growth and development under biotic and abiotic stress conditions. However, understanding about the functional role of rhizobacterial strains for wheat growth under salt stress remains largely unknown. Here we investigated the antagonistic bacterial strain Bacillus aryabhattai PM34 inhabiting ACC deaminase and exopolysaccharide producing ability to ameliorate salinity stress in wheat seedlings under in vitro conditions. The strain PM34 was isolated from the potato rhizosphere and screened for different PGP traits comprising nitrogen fixation, potassium, zinc solubilization, indole acetic acid, siderophore, and ammonia production, along with various extracellular enzyme activities. The strain PM34 showed significant tolerance towards both abiotic stresses including salt stress (NaCl 2 M), heavy metal (nickel, 100 ppm, and cadmium, 300 ppm), heat stress (60 °C), and biotic stress through mycelial inhibition of Rhizoctonia solani (43%) and Fusarium solani (41%). The PCR detection of ituC, nifH, and acds genes coding for iturin, nitrogenase, and ACC deaminase enzyme indicated the potential of strain PM34 for plant growth promotion and stress tolerance. In the in vitro experiment, NaCl (2 M) decreased the wheat growth while the inoculation of strain PM34 enhanced the germination% (48%), root length (76%), shoot length (75%), fresh biomass (79%), and dry biomass (87%) over to un-inoculated control under 2M NaCl level. The results of experiments depicted the ability of antagonistic bacterial strain Bacillus aryabhattai PM34 to augment salt stress tolerance when inoculated to wheat plants under saline environment.

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