Characterization of varM Encoding Type II ABC Transporter in Streptomyces virginiae, a Virginiamycin M1 Producer

2010 ◽  
Vol 24 (2) ◽  
pp. 51-57 ◽  
Author(s):  
Shigeru Kitani ◽  
Tatsuya Yamauchi ◽  
Eriko Fukushima ◽  
Chang Kwon Lee ◽  
Fitria Ningsih ◽  
...  
1998 ◽  
Vol 42 (11) ◽  
pp. 2985-2988 ◽  
Author(s):  
Naoyoshi Suzuki ◽  
Chang-Kwon Lee ◽  
Takuya Nihira ◽  
Yasuhiro Yamada

ABSTRACT Virginiamycin M1 (VM1), produced byStreptomyces virginiae, is a polyunsaturated macrocyclic lactone antibiotic belonging to the virginiamycin A group.S. virginiae possesses an activity which stereospecifically reduces a 16-carbonyl group of VM1, resulting in antibiotically inactive 16R-dihydroVM1. The corresponding VM1 reductase was purified to homogeneity from crude extracts of S. virginiae in five steps, with 5,650-fold purification and 23% overall yield. The N-terminal amino acid sequence was determined to be MAIKLVIA. The purified enzyme showed an apparent M r of 73,000 by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and anM r of 280,000 by native molecular sieve high-performance liquid chromatography, indicating the tetrameric nature of the native enzyme. NADPH served as a coenzyme for the reduction, with a Km value of 0.13 mM, but NADH did not support the reaction, even at a concentration of 5 mM, indicating the NADPH-specific nature of the enzyme. TheKm for VM1 was determined to be 1.5 mM in the presence of 2 mM NADPH. In the reverse reaction, only 16R-dihydroVM1, not the 16S-epimer, served as a substrate, with a less than 0.1% overall reaction rate compared to that of the forward reaction, confirming that the VM1 reductase participates solely in VM1 inactivation in vivo.


2020 ◽  
Vol 694 ◽  
pp. 137740 ◽  
Author(s):  
Mostafa Afifi Hassan ◽  
Aadil Waseem ◽  
Muhammad Ali Johar ◽  
Sou Young Yu ◽  
June Key Lee ◽  
...  

1997 ◽  
Vol 41 (9) ◽  
pp. 1904-1909 ◽  
Author(s):  
V de Crécy-Lagard ◽  
W Saurin ◽  
D Thibaut ◽  
P Gil ◽  
L Naudin ◽  
...  

Streptomyces pristinaespiralis and S. virginiae both produce closely related hexadepsipeptide antibiotics of the streptogramin B family. Pristinamycins I and virginiamycins S differ only in the fifth incorporated precursor, di(mono)methylated amine and phenylalanine, respectively. By using degenerate oligonucleotide probes derived from internal sequences of the purified S. pristinaespiralis SnbD and SnbE proteins, the genes from two streptogramin B producers, S. pristinaespiralis and S. virginiae, encoding the peptide synthetase involved in the activation and incorporation of the last four precursors (proline, 4-dimethylparaaminophenylalanine [for pristinamycin I(A)] or phenylalanine [for virginiamycin S], pipecolic acid, and phenylglycine) were cloned. Analysis of the sequence revealed that SnbD and SnbE are encoded by a unique snbDE gene. SnbDE (4,849 amino acids [aa]) contains four amino acid activation domains, four condensation domains, an N-methylation domain, and a C-terminal thioesterase domain. Comparison of the sequences of 55 amino acid-activating modules from different origins confirmed that these sequences contain enough information for the performance of legitimate predictions of their substrate specificity. Partial sequencing (1,993 aa) of the SnbDE protein of S. virginiae allowed comparison of the proline and aromatic acid activation domains of the two species and the identification of coupled frameshift mutations.


2013 ◽  
Vol 13 (1) ◽  
pp. 180 ◽  
Author(s):  
Lorenzo Carretero-Paulet ◽  
Agnieszka Lipska ◽  
Jordi Pérez-Gil ◽  
Félix J Sangari ◽  
Victor A Albert ◽  
...  

1997 ◽  
Vol 16 (1) ◽  
pp. 29-39 ◽  
Author(s):  
Sergio A. Jimenez ◽  
Leena Ala-Kokko ◽  
Darwin J. Prockop ◽  
Carmen F. Merryman ◽  
Nora Shepard ◽  
...  

2008 ◽  
Vol 67 (3) ◽  
pp. 541-557 ◽  
Author(s):  
Suneeta Khandavilli ◽  
Karen A. Homer ◽  
Jose Yuste ◽  
Shilpa Basavanna ◽  
Timothy Mitchell ◽  
...  

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