scholarly journals Deep learning as a tool for ecology and evolution

2021 ◽  
Author(s):  
Marek L. Borowiec ◽  
Paul Frandsen ◽  
Rebecca Dikow ◽  
Alexander McKeeken ◽  
Gabriele Valentini ◽  
...  
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Population Genetics ◽  
Deep Learning ◽  
Language Processing ◽  
Predictive Modeling ◽  
Input Data ◽  
Autonomous Driving ◽  
Behavioral Studies ◽  
Inference Methods

Deep learning is driving recent advances behind many everyday technologies, including those relying on speech and image recognition, natural language processing, and autonomous driving. It is also gaining popularity in biology, where it has been used for automated species identification, environmental monitoring, behavioral studies, DNA sequencing, and population genetics and phylogenetics, among other applications. Deep learning relies on artificial neural networks for predictive modeling and excels at recognizing complex patterns. Operating within the machine learning paradigm, deep learning can be viewed as an alternative to likelihood-based inference methods. It has desirable properties, including good performance and scaling with increasing complexity, while posing unique challenges such as sensitivity to bias in input data. In this review we provide a gentle introduction to deep learning, review its applications in ecology and evolution, and discuss its limitations and efforts to overcome them. We also provide a practical primer for biologists interested in including deep learning in their toolkit and identify its possible future applications.

Deep Learning and Biomedical Engineering

Biotechnology ◽  
2019 ◽  
pp. 562-575
Author(s):  
Suraj Sawant
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Artificial Neural Networks ◽  
Deep Learning ◽  
Real World ◽  
Biomedical Engineering ◽  
Input Data ◽  
Reference Source ◽  
Data Input ◽  
Essential Information

Deep learning (DL) is a method of machine learning, as running over artificial neural networks, which has a structure above the standards to deal with large amounts of data. That is generally because of the increasing amount of data, input data sizes, and of course, greater complexity of objective real-world problems. Performed research studies in the associated literature show that the DL currently has a good performance among considered problems and it seems to be a strong solution for more advanced problems of the future. In this context, this chapter aims to provide some essential information about DL and its applications within the field of biomedical engineering. The chapter is organized as a reference source for enabling readers to have an idea about the relation between DL and biomedical engineering.

scholarly journals Deep Machine Learning and Neural Networks: An Overview

2017 ◽  
Vol 6 (2) ◽  
pp. 66 ◽  
Author(s):  
Chandrahas Mishra ◽  
D. L. Gupta
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Language Processing ◽  
Learning Algorithm ◽  
Machine Learning Algorithm ◽  
Application Area ◽  
Intelligent Machines ◽  
Different Types ◽  
Dynamic Examination

Deep learning is a technique of machine learning in artificial intelligence area. Deep learning in a refined "machine learning" algorithm that far surpasses a considerable lot of its forerunners in its capacities to perceive syllables and picture. Deep learning is as of now a greatly dynamic examination territory in machine learning and example acknowledgment society. It has increased colossal triumphs in an expansive zone of utilizations, for example, speech recognition, computer vision and natural language processing and numerous industry item. Neural network is used to implement the machine learning or to design intelligent machines. In this paper brief introduction to all machine learning paradigm and application area of deep machine learning and different types of neural networks with applications is discussed.

scholarly journals Neural Language Modeling for Molecule Generation

2021 ◽  
Author(s):  
Sanjar Adilov
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Natural Language Processing ◽  
Drug Design ◽  
Natural Language ◽  
Language Processing ◽  
De Novo ◽  
Language Modeling ◽  
Machine Learning Methods

Generative neural networks have shown promising results in <i>de novo</i> drug design. Recent studies suggest that one of the efficient ways to produce novel molecules matching target properties is to model SMILES sequences using deep learning in a way similar to language modeling in natural language processing. In this paper, we present a survey of various machine learning methods for SMILES-based language modeling and propose our benchmarking results on a standardized subset of ChEMBL database.

scholarly journals Neural Language Modeling for Molecule Generation

2021 ◽  
Author(s):  
Sanjar Adilov
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Natural Language Processing ◽  
Drug Design ◽  
Natural Language ◽  
Language Processing ◽  
De Novo ◽  
Language Modeling ◽  
Machine Learning Methods

Generative neural networks have shown promising results in <i>de novo</i> drug design. Recent studies suggest that one of the efficient ways to produce novel molecules matching target properties is to model SMILES sequences using deep learning in a way similar to language modeling in natural language processing. In this paper, we present a survey of various machine learning methods for SMILES-based language modeling and propose our benchmarking results on a standardized subset of ChEMBL database.

scholarly journals Optical coherent dot-product chip for sophisticated deep learning regression

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Shaofu Xu ◽  
Jing Wang ◽  
Haowen Shu ◽  
Zhike Zhang ◽  
Sicheng Yi ◽  
...  
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Deep Learning ◽  
Language Processing ◽  
High Speed ◽  
Autonomous Driving ◽  
Single Chip ◽  
Optical Fields ◽  
Large Bandwidth ◽  
Dot Product

AbstractOptical implementations of neural networks (ONNs) herald the next-generation high-speed and energy-efficient deep learning computing by harnessing the technical advantages of large bandwidth and high parallelism of optics. However, due to the problems of the incomplete numerical domain, limited hardware scale, or inadequate numerical accuracy, the majority of existing ONNs were studied for basic classification tasks. Given that regression is a fundamental form of deep learning and accounts for a large part of current artificial intelligence applications, it is necessary to master deep learning regression for further development and deployment of ONNs. Here, we demonstrate a silicon-based optical coherent dot-product chip (OCDC) capable of completing deep learning regression tasks. The OCDC adopts optical fields to carry out operations in the complete real-value domain instead of in only the positive domain. Via reusing, a single chip conducts matrix multiplications and convolutions in neural networks of any complexity. Also, hardware deviations are compensated via in-situ backpropagation control provided the simplicity of chip architecture. Therefore, the OCDC meets the requirements for sophisticated regression tasks and we successfully demonstrate a representative neural network, the AUTOMAP (a cutting-edge neural network model for image reconstruction). The quality of reconstructed images by the OCDC and a 32-bit digital computer is comparable. To the best of our knowledge, there is no precedent of performing such state-of-the-art regression tasks on ONN chips. It is anticipated that the OCDC can promote the novel accomplishment of ONNs in modern AI applications including autonomous driving, natural language processing, and scientific study.

scholarly journals Machine learning in medicine: what clinicians should know

2021 ◽  
Author(s):  
JZT Sim ◽  
QW Fong ◽  
WM Huang ◽  
CH Tan
Keyword(s):  
Artificial Intelligence ◽  
Machine Learning ◽  
Neural Networks ◽  
Decision Making ◽  
Deep Learning ◽  
Language Processing ◽  
Decision Making Process ◽  
Application Domain ◽  
Basic Concepts ◽  
Potential Impact

With the advent of artificial intelligence (AI), machines are increasingly being used to complete complicated tasks, yielding remarkable results. Machine learning (ML) is the most relevant subset of AI in medicine, which will soon become an integral part of our everyday practice. Therefore, physicians should acquaint themselves with ML and AI, and their role as an enabler rather than a competitor. Herein, we introduce basic concepts and terms used in AI and ML, and aim to demystify commonly used AI/ML algorithms such as learning methods including neural networks/deep learning, decision tree and application domain in computer vision and natural language processing through specific examples. We discuss how machines are already being used to augment the physician’s decision-making process, and postulate the potential impact of ML on medical practice and medical research based on its current capabilities and known limitations. Moreover, we discuss the feasibility of full machine autonomy in medicine.

scholarly journals Artificial Intelligence in Business

2020 ◽  
pp. 1-38
Author(s):  
Amandeep Kaur ◽  
◽  
Anjum Mohammad Aslam ◽  
Keyword(s):  
Artificial Intelligence ◽  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Natural Language Processing ◽  
Natural Language ◽  
Case Studies ◽  
Language Processing ◽  
Learning Abilities ◽  
The Core

In this chapter we discuss the core concept of Artificial Intelligence. We define the term of Artificial Intelligence and its interconnected terms such as Machine learning, deep learning, Neural Networks. We describe the concept with the perspective of its usage in the area of business. We further analyze various applications and case studies which can be achieved using Artificial Intelligence and its sub fields. In the area of business already numerous Artificial Intelligence applications are being utilized and will be expected to be utilized more in the future where machines will improve the Artificial Intelligence, Natural language processing, Machine learning abilities of humans in various zones.

Deep Learning and Biomedical Engineering

2018 ◽  
pp. 283-296
Author(s):  
Suraj Sawant
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Artificial Neural Networks ◽  
Deep Learning ◽  
Real World ◽  
Biomedical Engineering ◽  
Input Data ◽  
Reference Source ◽  
Data Input ◽  
Essential Information

Deep learning (DL) is a method of machine learning, as running over artificial neural networks, which has a structure above the standards to deal with large amounts of data. That is generally because of the increasing amount of data, input data sizes, and of course, greater complexity of objective real-world problems. Performed research studies in the associated literature show that the DL currently has a good performance among considered problems and it seems to be a strong solution for more advanced problems of the future. In this context, this chapter aims to provide some essential information about DL and its applications within the field of biomedical engineering. The chapter is organized as a reference source for enabling readers to have an idea about the relation between DL and biomedical engineering.

scholarly journals Deep Learning for Period Classification of Historical Hebrew Texts

2020 ◽  
Vol 2020 ◽  
Author(s):  
Chaya Liebeskind ◽  
Shmuel Liebeskind
Keyword(s):  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Language Processing ◽  
General Purpose ◽  
Machine Learning Algorithms ◽  
Vector Model ◽  
Historical Texts ◽  
Interesting Task ◽  
Primary Advantage

In this study, we address the interesting task of classifying historical texts by their assumed period of writ-ing. This task is useful in digital humanity studies where many texts have unidentified publication dates.For years, the typical approach for temporal text classification was supervised using machine-learningalgorithms. These algorithms require careful feature engineering and considerable domain expertise todesign a feature extractor to transform the raw text into a feature vector from which the classifier couldlearn to classify any unseen valid input. Recently, deep learning has produced extremely promising re-sults for various tasks in natural language processing (NLP). The primary advantage of deep learning isthat human engineers did not design the feature layers, but the features were extrapolated from data witha general-purpose learning procedure. We investigated deep learning models for period classification ofhistorical texts. We compared three common models: paragraph vectors, convolutional neural networks (CNN) and recurrent neural networks (RNN), and conventional machine-learning methods. We demon-strate that the CNN and RNN models outperformed the paragraph vector model and the conventionalsupervised machine-learning algorithms. In addition, we constructed word embeddings for each timeperiod and analyzed semantic changes of word meanings over time.

scholarly journals Diving Deep into Deep Learning:History, Evolution, Types and Applications

2020 ◽  
Vol 9 (3) ◽  
pp. 2835-2846
Keyword(s):  
Neural Network ◽  
Machine Learning ◽  
Neural Networks ◽  
Deep Learning ◽  
Language Processing ◽  
Relevant Information ◽  
Unstructured Data ◽  
Learning Ability ◽  
Potential Use ◽  
Human Nervous System

Although Machine Learning (ML) has become synonymous for Artificial Intelligence (AI); recently, Deep Learning (DL) is being used in place of machine learning persistently. If statistics is grammar and machine learning is poetry then deep learning is the creation of Socrates. While machine learning is busy in supervised and unsupervised methods, deep learning continues its motivation for replicating the human nervous system by incorporating advanced types of Neural Networks (NN). Due to its practicability, deep learning is finding its applications in various AI solutions such as computer vision, natural language processing, intelligent video analytics, analyzing hyperspectral imagery from satellites and so on. Here we have made an attempt to demonstrate strong learning ability and better usage of the dataset for feature extraction by deep learning. This paper provides an introductory tutorial to the domain of deep learning with its history, evolution, and introduction to some of the sophisticated neural networks such as Convolutional Neural Network (CNN) and Recurrent Neural Network (RNN). This work will serve as an introduction to the amazing field of deep learning and its potential use in dealing with today’s large chunk of unstructured data, that it could take decades for humans to comprehend and extract relevant information.

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