scholarly journals Diagnosing Autism Spectrum Disorder from Brain Resting-State Functional Connectivity Patterns Using a Deep Neural Network with a Novel Feature Selection Method

2017 ◽  
Vol 11 ◽  
Author(s):  
Xinyu Guo ◽  
Kelli C. Dominick ◽  
Ali A. Minai ◽  
Hailong Li ◽  
Craig A. Erickson ◽  
...  
2020 ◽  
Vol 2020 ◽  
pp. 1-12
Author(s):  
Jinlong Hu ◽  
Lijie Cao ◽  
Tenghui Li ◽  
Bin Liao ◽  
Shoubin Dong ◽  
...  

Deep neural networks have recently been applied to the study of brain disorders such as autism spectrum disorder (ASD) with great success. However, the internal logics of these networks are difficult to interpret, especially with regard to how specific network architecture decisions are made. In this paper, we study an interpretable neural network model as a method to identify ASD participants from functional magnetic resonance imaging (fMRI) data and interpret results of the model in a precise and consistent manner. First, we propose an interpretable fully connected neural network (FCNN) to classify two groups, ASD versus healthy controls (HC), based on input data from resting-state functional connectivity (rsFC) between regions of interests (ROIs). The proposed FCNN model is a piecewise linear neural network (PLNN) which uses piecewise linear function LeakyReLU as its activation function. We experimentally compared the FCNN model against widely used classification models including support vector machine (SVM), random forest, and two new classes of deep neural network models in a large dataset containing 871 subjects from ABIDE I database. The results show the proposed FCNN model achieves the highest classification accuracy. Second, we further propose an interpreting method which could explain the trained model precisely with a precise linear formula for each input sample and decision features which contributed most to the classification of ASD versus HC participants in the model. We also discuss the implications of our proposed approach for fMRI data classification and interpretation.


2021 ◽  
Vol 2021 ◽  
pp. 1-9
Author(s):  
Dengqing Zhang ◽  
Yunyi Chen ◽  
Yuxuan Chen ◽  
Shengyi Ye ◽  
Wenyu Cai ◽  
...  

In recent decades, heart disease threatens people’s health seriously because of its prevalence and high risk of death. Therefore, predicting heart disease through some simple physical indicators obtained from the regular physical examination at an early stage has become a valuable subject. Clinically, it is essential to be sensitive to these indicators related to heart disease to make predictions and provide a reliable basis for further diagnosis. However, the large amount of data makes manual analysis and prediction taxing and arduous. Our research aims to predict heart disease both accurately and quickly through various indicators of the body. In this paper, a novel heart disease prediction model is given. We propose a heart disease prediction algorithm that combines the embedded feature selection method and deep neural networks. This embedded feature selection method is based on the LinearSVC algorithm, using the L1 norm as a penalty item to choose a subset of features significantly associated with heart disease. These features are fed into the deep neural network we built. The weight of the network is initialized with the He initializer to prevent gradient varnishing or explosion so that the predictor can have a better performance. Our model is tested on the heart disease dataset obtained from Kaggle. Some indicators including accuracy, recall, precision, and F1-score are calculated to evaluate the predictor, and the results show that our model achieves 98.56%, 99.35%, 97.84%, and 0.983, respectively, and the average AUC score of the model reaches 0.983, confirming that the method we proposed is efficient and reliable for predicting heart disease.


2021 ◽  
Vol 12 ◽  
Author(s):  
Jia Wang ◽  
Xiaomin Wang ◽  
Runshi Wang ◽  
Xujun Duan ◽  
Heng Chen ◽  
...  

Autism spectrum disorder (ASD) has been reported to have altered brain connectivity patterns in sensory networks, assessed using resting-state functional magnetic imaging (rs-fMRI). However, the results have been inconsistent. Herein, we aimed to systematically explore the interaction between brain sensory networks in 3–7-year-old boys with ASD (N = 29) using independent component analysis (ICA). Participants were matched for age, head motion, and handedness in the MRI scanner. We estimated the between-group differences in spatial patterns of the sensory resting-state networks (RSNs). Subsequently, the time series of each RSN were extracted from each participant’s preprocessed data and associated estimates of interaction strength between intra- and internetwork functional connectivity (FC) and symptom severity in children with ASD. The auditory network (AN), higher visual network (HVN), primary visual network (PVN), and sensorimotor network (SMN) were identified. Relative to TDs, individuals with ASD showed increased FC in the AN and SMN, respectively. Higher positive connectivity between the PVN and HVN in the ASD group was shown. The strength of such connections was associated with symptom severity. The current study might suggest that the abnormal connectivity patterns of the sensory network regions may underlie impaired higher-order multisensory integration in ASD children, and be associated with social impairments.


2008 ◽  
Author(s):  
Xiaojia Wang ◽  
Qirong Mao ◽  
Yongzhao Zhan ◽  
Theodore E. Simos ◽  
George Psihoyios

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