scholarly journals On the Diversity of Phyllodocida (Annelida: Errantia), with a Focus on Glyceridae, Goniadidae, Nephtyidae, Polynoidae, Sphaerodoridae, Syllidae, and the Holoplanktonic Families

Diversity ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 131
Author(s):  
Daniel Martin ◽  
Maria Teresa Aguado ◽  
María-Ana Fernández Álamo ◽  
Temir Alanovich Britayev ◽  
Markus Böggemann ◽  
...  
Keyword(s):  
Species Concept ◽  
Current Knowledge ◽  
Sampling Bias ◽  
Molecular Data ◽  
Nominal Species ◽  
Deep Waters ◽  
European North ◽  
Continental Shelves ◽  
Molecular Barcode ◽  
Group 2

Phyllodocida is a clade of errantiate annelids characterized by having ventral sensory palps, anterior enlarged cirri, axial muscular proboscis, compound chaetae (if present) with a single ligament, and of lacking dorsolateral folds. Members of most families date back to the Carboniferous, although the earliest fossil was dated from the Devonian. Phyllodocida holds 27 well-established and morphologically homogenous clades ranked as families, gathering more than 4600 currently accepted nominal species. Among them, Syllidae and Polynoidae are the most specious polychaete groups. Species of Phyllodocida are mainly found in the marine benthos, although a few inhabit freshwater, terrestrial and planktonic environments, and occur from intertidal to deep waters in all oceans. In this review, we (1) explore the current knowledge on species diversity trends (based on traditional species concept and molecular data), phylogeny, ecology, and geographic distribution for the whole group, (2) try to identify the main knowledge gaps, and (3) focus on selected families: Alciopidae, Goniadidae, Glyceridae, Iospilidae, Lopadorrhynchidae, Polynoidae, Pontodoridae, Nephtyidae, Sphaerodoridae, Syllidae, Tomopteridae, Typhloscolecidae, and Yndolaciidae. The highest species richness is concentrated in European, North American, and Australian continental shelves (reflecting a strong sampling bias). While most data come from shallow coastal and surface environments most world oceans are clearly under-studied. The overall trends indicate that new descriptions are constantly added through time and that less than 10% of the known species have molecular barcode information available.

Occurrence and molecular identification of zoonotic microsporidia in pet budgerigars (Melopsittacus undulatus) in Turkey

2020 ◽  
Author(s):  
Didem Pekmezci ◽  
Gamze Yetismis ◽  
Cagatay Esin ◽  
Onder Duzlu ◽  
Zeynep Nurselin Colak ◽  
...  
Keyword(s):  
Current Knowledge ◽  
Companion Animals ◽  
Its Region ◽  
Molecular Data ◽  
Enterocytozoon Bieneusi ◽  
Avian Host ◽  
Wild Mammals ◽  
Pet Birds ◽  
Group 2 ◽  
Pcr Targeting

Abstract Encephalitozoon spp. and Enterocytozoon bieneusi are well-known microsporidian pathogens, recently classified as fungi, infecting humans and reptiles, mammals, and birds. Budgerigars (Melopsittacus undulates) are the most preferred captive pet birds in the households. Prevalence and molecular data on microsporidian species in budgerigars are scarce worldwide. The aim of the present study was to investigate the occurrence and genotypes of Encephalitozoon spp. and E. bieneusi in budgerigars, and to reveal their zoonotic potential. A total of 143 fecal samples were collected from owned healthy budgerigars in Turkey. Encephalitozoon spp. and E. bieneusi were examined by nested PCR targeting the ribosomal internal transcribed spacer (ITS) region and sequenced for identifying Encephalitozoon spp. and E. bieneusi. The overall prevalence of E. hellem and E. bieneusi was 14.7% (21/143) and 3.5% (5/143), respectively. Two genotypes of E. hellem were identified, including one known 1A (n = 18) and a novel TURK1B (n = 3). In addition, we determined two E. bieneusi genotypes, including one known N (n = 2) and a novel TURKM1 (n = 3). E. hellem 1A and novel TURK1B clustered as a sister taxon, and genotype N and novel TURKM1 genotypes fall into group 2 of E. bieneusi in the phylogenetic tree. Novel genotypes of E. hellem and E. bieneusi were described for the first time in the avian host. Moreover, E. bieneusi genotype N was first detected in avian hosts in the present study. This study contributes to the current knowledge on the molecular epidemiology and transmission dynamics of E. hellem and E. bieneusi. Lay Summary Spore producing microsporidia are ubiquitous, obligate, and intracellular fungus defined as emerging opportunistic pathogens of humans, livestock, companion animals, wild mammals, birds, and water worldwide. The occurrence of microsporidia in animals could be risky for human public health.

scholarly journals Loose Ends in the Cortinarius Phylogeny: Five New Myxotelamonoid Species Indicate a High Diversity of These Ectomycorrhizal Fungi with South American Nothofagaceae

Life ◽  
2021 ◽  
Vol 11 (5) ◽  
pp. 420
Author(s):  
María Eugenia Salgado Salomón ◽  
Carolina Barroetaveña ◽  
Tuula Niskanen ◽  
Kare Liimatainen ◽  
Matthew E. Smith ◽  
...  
Keyword(s):  
New Species ◽  
Current Knowledge ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Global Scale ◽  
South American ◽  
Edible Fungi ◽  
Rdna Its ◽  
Morphological And Molecular Data ◽  
High Diversity

This paper is a contribution to the current knowledge of taxonomy, ecology and distribution of South American Cortinarius (Pers.) Gray. Cortinarius is among the most widely distributed and species-rich basidiomycete genera occurring with South American Nothofagaceae and species are found in many distinct habitats, including shrublands and forests. Due to their ectomycorrhizal role, Cortinarius species are critical for nutrient cycling in forests, especially at higher latitudes. Some species have also been reported as edible fungi with high nutritional quality. Our aim is to unravel the taxonomy of selected Cortinarius belonging to phlegmacioid and myxotelamonioid species based on morphological and molecular data. After widely sampling Cortinarius specimens in Patagonian Nothofagaceae forests and comparing them to reference collections (including holotypes), we propose five new species of Cortinarius in this work. Phylogenetic analyses of concatenated rDNA ITS-LSU and RPB1 sequences failed to place these new species into known Cortinarius sections or lineages. These findings highlight our knowledge gaps regarding the fungal diversity of South American Nothofagaceae forests. Due to the high diversity of endemic Patagonian taxa, it is clear that the South American Cortinarius diversity needs to be discovered and described in order to understand the evolutionary history of Cortinarius on a global scale.

scholarly journals Diversity, distribution, and drivers of Polychromophilus infection in Malagasy bats

2021 ◽  
Vol 20 (1) ◽  
Author(s):  
Mercia Rasoanoro ◽  
Steven M. Goodman ◽  
Milijaona Randrianarivelojosia ◽  
Mbola Rakotondratsimba ◽  
Koussay Dellagi ◽  
...  
Keyword(s):  
Host Specificity ◽  
Current Knowledge ◽  
Abiotic Factors ◽  
Molecular Data ◽  
Potential Effect ◽  
Molecular Techniques ◽  
Blood Parasites ◽  
Single Individual ◽  
Additional Material ◽  
Maxent Modelling

Abstract Background Numerous studies have been undertaken to advance knowledge of apicomplexan parasites infecting vertebrates, including humans. Of these parasites, the genus Plasmodium has been most extensively studied because of the socio-economic and public health impacts of malaria. In non-human vertebrates, studies on malaria or malaria-like parasite groups have been conducted but information is far from complete. In Madagascar, recent studies on bat blood parasites indicate that three chiropteran families (Miniopteridae, Rhinonycteridae, and Vespertilionidae) are infected by the genus Polychromophilus with pronounced host specificity: Miniopterus spp. (Miniopteridae) harbour Polychromophilus melanipherus and Myotis goudoti (Vespertilionidae) is infected by Polychromophilus murinus. However, most of the individuals analysed in previous studies were sampled on the western and central portions of the island. The aims of this study are (1) to add new information on bat blood parasites in eastern Madagascar, and (2) to highlight biotic and abiotic variables driving prevalence across the island. Methods Fieldworks were undertaken from 2014 to 2016 in four sites in the eastern portion of Madagascar to capture bats and collect biological samples. Morphological and molecular techniques were used to identify the presence of haemosporidian parasites. Further, a MaxEnt modelling was undertaken using data from Polychromophilus melanipherus to identify variables influencing the presence of this parasite Results In total, 222 individual bats belonging to 17 species and seven families were analysed. Polychromophilus infections were identified in two families: Miniopteridae and Vespertilionidae. Molecular data showed that Polychromophilus spp. parasitizing Malagasy bats form a monophyletic group composed of three distinct clades displaying marked host specificity. In addition to P. melanipherus and P. murinus, hosted by Miniopterus spp. and Myotis goudoti, respectively, a novel Polychromophilus lineage was identified from a single individual of Scotophilus robustus. Based on the present study and the literature, different biotic and abiotic factors are shown to influence Polychromophilus infection in bats, which are correlated based on MaxEnt modelling. Conclusions The present study improves current knowledge on Polychromophilus blood parasites infecting Malagasy bats and confirms the existence of a novel Polychromophilus lineage in Scotophilus bats. Additional studies are needed to obtain additional material of this novel lineage to resolve its taxonomic relationship with known members of the genus. Further, the transmission mode of Polychromophilus in bats as well as its potential effect on bat populations should be investigated to complement the results provided by MaxEnt modelling and eventually provide a comprehensive picture of the biology of host-parasite interactions.

Revision of Autolytinae (Syllidae: Polychaeta)

Zootaxa ◽  
2004 ◽  
Vol 680 (1) ◽  
pp. 1 ◽  
Author(s):  
ARNE NYGREN
Keyword(s):  
Morphological Characters ◽  
Molecular Data ◽  
Morphological Data ◽  
Data Sets ◽  
Nominal Species ◽  
Strict Consensus Tree ◽  
Incertae Sedis ◽  
Nomina Dubia ◽  
Morphological And Molecular Data ◽  
Combined Data

Autolytinae is revised based on available types, and newly collected specimens. Out of 170 nominal species, 18 are considered as incertae sedis, 43 are regarded as junior synonyms, and 25 are referred to as nomina dubia. The relationships of Autolytinae is assessed from 51 morphological characters and 211 states for 76 ingroup-taxa, and 460 molecular characters from mitochondrial 16S rDNA and nuclear 18S rDNA for 31 ingroup-taxa; outgroups include 12 non-autolytine syllid polychaetes. Two analyses are provided, one including morphological data only, and one with combined morphological and molecular data sets. The resulting strict consensus tree from the combined data is chosen for a reclassification. Three main clades are identified: Procerini trib. n., Autolytini Grube, 1850, and Epigamia gen. n. Proceraea Ehlers, 1864 and Myrianida Milne Edwards, 1845 are referred to as nomen protectum, while Scolopendra Slabber, 1781, Podonereis Blainville, 1818, Amytis Savigny, 1822, Polynice Savigny, 1822, and Nereisyllis Blainville, 1828 are considered

A new riparian Mantidactylus (Brygoomantis) frog from the Tsaratanana and Manongarivo Massifs in northern Madagascar

Zootaxa ◽  
2018 ◽  
Vol 4486 (4) ◽  
pp. 575 ◽  
Author(s):  
MIGUEL VENCES ◽  
ANDREA HILDENBRAND ◽  
KATHARINA M. WARMUTH ◽  
FRANCO ANDREONE ◽  
FRANK GLAW
Keyword(s):  
New Species ◽  
Nuclear Dna ◽  
Taxonomic Revision ◽  
Morphological Characters ◽  
Molecular Data ◽  
Test Case ◽  
Nominal Species ◽  
Type Specimens ◽  
The Status ◽  
Morphological Differences

The subgenus Brygoomantis in the Madagascar-endemic genus Mantidactylus contains 12 nominal species but is in urgent need of taxonomic revision as many additional, genetically divergent but undescribed candidate species have been identified. We here take a first step towards a better resolution of this group by describing a new species, Mantidactylus schulzi sp. nov., occurring at the Tsaratanana and Manongarivo Massifs, differentiated in genetic, bioacoustic and sometimes morphological characters from its closest relatives. We show that upon detailed study, most species in Brygoomantis can be delimited by concordant differentiation of mitochondrial and nuclear DNA, and by bioacoustic and morphological differences. We flag this group of morphologically similar frogs as a test case where molecular data on historical type specimens by ancient DNA methods might be needed to reach a satisfying clarification of taxonomy and nomenclature. However, the status of the new species M. schulzi is not in doubt as it is morphologically distinct from most historical type specimens, and microendemic to a region in northern Madagascar from where no earlier names exist. 

New species of Crella (Pytheas) Topsent, 1890 and Crellomima Rezvoi, 1925 (Crellidae, Poecilosclerida, Demospongiae) from Chilean shallow and Argentinean deep waters, with a synthesis on the known phylogenetic relationships of crellid sponges

Zootaxa ◽  
2021 ◽  
Vol 5052 (3) ◽  
pp. 353-379
Author(s):  
JULIO C.C. FERNANDEZ ◽  
MARIANELA GASTALDI ◽  
GERMÁN ZAPATA-HERNÁNDEZ ◽  
LUIS M. PARDO ◽  
FABIANO L. THOMPSON ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Relationships ◽  
Morphological Characters ◽  
Molecular Data ◽  
Southern Chile ◽  
Deep Waters ◽  
Molecular Phylogenetic ◽  
Molecular Phylogenies ◽  
Taxonomic Studies ◽  
Phylogenetic Affinities

Here, we describe four new species of Crellidae Dendy, 1922 and discuss characters and relationships from published molecular phylogenies including crellid sponges. New species proposed are Crella (Pytheas) chiloensis Fernandez, Gastaldi, Pardo & Hajdu, sp. nov., from southern Chile (15 m depth), C. (P.) desventuradae Fernandez, Gastaldi, Zapata-Hernández & Hajdu, sp. nov., from Desventuradas Archipelago (10–20 m depth), Crella (P.) santacruzae Fernandez, Gastaldi, Thompson & Hajdu, sp. nov., from deep waters off Argentina (750 m depth) and Crellomima sigmatifera Fernandez, Gastaldi & Hajdu, sp. nov., from the Chilean fjords region (ca. 20 m depth). These new species are set apart from each other and from known species mainly due to aspects of their spiculation. Chelae microscleres and acanthostyles supply characters that might be used to infer phylogenetic relationships and to verify the monophyly of Crella Gray, 1867 and Crellidae, which has seemingly been contradicted by preliminary molecular data available in the systematics’ literature. Our own interpretation of phylogenetic affinities, in the light of morphological characters from previous taxonomic studies, argues for a classification reassessment of materials (vouchers) included in these molecular phylogenies, especially in the case of Crella incrustans (Carter, 1885). We argue that currently available molecular phylogenetic outcomes for crellid sponges are not supportive of the polyphyly of Crella and Crellidae.  

Description and paleobiogeographic significance of a rare Cenomanian molluscan faunule from Bathurst Island, northern Australia

2002 ◽  
Vol 76 (3) ◽  
pp. 447-471 ◽  
Author(s):  
Jeffrey D. Stilwell ◽  
Robert A. Henderson
Keyword(s):  
Southern Hemisphere ◽  
Large Scale ◽  
Early Stage ◽  
High Energy ◽  
Global Scale ◽  
Nominal Species ◽  
Oceanic Circulation ◽  
Northern Australia ◽  
Continental Shelves ◽  
Deposit Feeding

A middle Cenomanian faunule from the Moonkinu Formation of Bathurst Island in Northern Australia contains the best-preserved suite of benthic Mollusca known from the Cretaceous of the Australian region. Twenty-four species of bivalves, gastropods, and scaphopods, many exquisitely preserved with original aragonitic nacre, are recognized. Thirteen are new: Nucula s.l. meadinga n. sp. (Nuculidae), Nuculana bathurstensis n. sp. (Nuculanidae), Jupiteria? n. sp. A (Nuculanidae), Varicorbula cretaustrina n. sp. (Corbulidae), Vanikoropsis demipleurus n. sp. (Vanikoridae), Euspira n. sp. A (Naticidae), Amuletum praeturriformis n. sp. (Turridae), Granosolarium cretasteum n. sp. (Architectonicidae), Echinimathilda moonkinua n. sp. (Mathildidae), Acteon bathurstensis n. sp. (Acteonidae), Biplica antichthona n. sp. (Ringiculidae), Goniocylichna australocylindricata n. sp. (Cylichnidae), and Dentalium (Dentalium) n. sp. A (Dentaliidae). Nominal species of Nuculana, Grammatodon, Cylichna, and Laevidentalium also are present. The occurrence of ammonites, including taxa that occur in the type Cenomanian, securely establishes the fauna as middle Cenomanian (Acanthoceras rhotomagense Zone). The Moonkinu Formation and its faunule were deposited in a high-energy, shallow-shelfal setting, as part of a large-scale regressive cycle recognized as the Money Shoals Platform of northern Australia. The assemblage represents a parauthochthonous suite which experienced little or no post mortem transport. Epifaunal and infaunal suspension feeders (some 60 percent) dominate the bivalve fauna with a subordinate representation of deposit-feeding infaunal burrowers (some 40 percent). Nearly all of the gastopods were carnivores with the aporrhaid Latiala mountnorrisi (Skwarko), probably a deposit feeder, the only exception. The scaphopods were probably micro-carnivores. Concentrations of the ammonite Sciponoceras glaessneri are likely the result of mass kills in surface waters. The cosmopolitan nature of the Bathurst Island fauna at the genus-level reflects unrestricted oceanic circulation patterns and an equitable climate on a global scale during the Cenomanian. The retreat and disappearance of the Australian epicontinental sea at the close of the Albian coincided with reduced endemism in the molluscan faunas, after which time the continental shelves hosted a rich suite of cosmopolitan affinity. The high number of endemic species in the Moonkinu Formation probably represents an early stage of broad-scale genetic separation among Southern Hemisphere molluscan stocks, a trend that became increasingly pronounced through the Late Cretaceous. The new records of Varicorbula, Amuletum, Granosolarium, Echinimathilda, and Goniocylichna represent the oldest occurrences recorded for these genera and are suggestive of Southern Hemisphere origins.

First record of Cladocroce (Porifera: Haplosclerida: Chalinidae) from the Eastern Pacific ocean with the description of Cladocroce reina sp. nov.

Zootaxa ◽  
2010 ◽  
Vol 2603 (1) ◽  
pp. 65
Author(s):  
JOSE MARIA AGUILAR-CAMACHO ◽  
JOSE LUIS CARBALLO
Keyword(s):  
Pacific Coast ◽  
Current Knowledge ◽  
First Record ◽  
Shallow Waters ◽  
Principal Characteristic ◽  
Mexican Pacific ◽  
Fiber Tracts ◽  
Deep Waters ◽  
The Family ◽  
A New Species

Chalinidae is a family of haplosclerid sponges with a delicate reticulated chaonosomal skeleton of uni-, pauci- or multispicular primary lines which are connected by unispicular secondary lines, and with an ectosomal skeleton, if present, formed by a regular hexagonal, unispicular, tangential reticulation (Weerdt 2002). Currently, the family harbors only five valid genera (Chalinula, Cladocroce, Dendrectilla, Dendroxea and Haliclona; Soest et al. 2008), although recent molecular studies suggest that a new rearrangement of the present classification is needed (Redmond et al. 2007). Cladocroce was described by Topsent (1892) from specimens collected in the Atlantic Ocean. The principal characteristic of this genus is the presence of multispicular fiber tracts with a rather dense subisotropic reticulation in between (Weerdt 2002). After that, 10 species have been described, most of them from deep waters and cold climates (Putchakarn et al. 2004). Only three species have been found living in shallow waters: C. aculeata Pulitzer-Finali, 1982 from the Great Barrier Reef, C. burapha Putchakarn et al., 2004 from the Gulf of Thailand, and C. tubulosa Pulitzer-Finali, 1993 from the port of Mombasa, in Kenya. Sponge taxonomy studies in the Mexican Pacific coast have been focused mainly on hadromerids, and particularly on boring sponges (Carballo et al. 2008), and the current knowledge of haplosclerids is very scarce (Cruz-Barraza & Carballo 2006). In this paper, a new species of Cladocroce is described and compared with the other species recorded worldwide. With this contribution the genus Cladocroce increases to 12 species.

Molecular divergence between two sympatric species of Dondice (Mollusca: Nudibranchia) with distinct feeding specializations

2013 ◽  
Vol 93 (7) ◽  
pp. 1887-1893 ◽  
Author(s):  
Luis Gonzalez ◽  
Dieta Hanson ◽  
Ángel Valdés
Keyword(s):  
Feeding Habits ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Sympatric Species ◽  
Developmental Differences ◽  
Nominal Species ◽  
Western Atlantic ◽  
16S Gene ◽  
Putative Species ◽  
Gene Data

Analysis of mitochondrial (16S) and nuclear (H3) gene data using phylogenetic and population genetic approaches has revealed some genetic differences between two putative species of western Atlantic Dondice opisthobranchs that feed differentially on hydroids or on up-side-down jellies of the genus Cassiopeia. These results partially support the validity of the species Dondice parguerensis, which was described for the jelly-eating Dondice. However, phylogenetic analyses revealed that the hydroid-feeding species Dondice occidentalis and D. parguerensis are not reciprocally monophyletic and they are identical for the nuclear H3 gene. Although there are morphological and developmental differences between these two nominal species, the molecular data are inconclusive. A possible explanation is that the two putative species are in the process of speciation due to different feeding habits, resulting in the presence of genetic synapomorphies in D. parguerensis, but only in the more variable 16S gene. Because the ranges D. occidentalis and D. parguerensis overlap and there are no obvious barriers to gene flow between the two putative species, this may constitute a possible example of incipient sympatric speciation in benthic marine organisms.

High cryptic diversity in the kleptoparasitic genus Hyalorisia Dall, 1889 (Littorinimorpha: Capulidae) with the description of nine new species from the Indo-West Pacific

2020 ◽  
Vol 86 (4) ◽  
pp. 401-421 ◽  
Author(s):  
Giulia Fassio ◽  
Valeria Russini ◽  
Barbara Buge ◽  
Stefano Schiaparelli ◽  
Maria Vittoria Modica ◽  
...  
Keyword(s):  
Trophic Ecology ◽  
Molecular Data ◽  
Sympatric Species ◽  
Water Current ◽  
Phylogenetic Position ◽  
Nominal Species ◽  
West Pacific ◽  
Allopatric Species ◽  
Wide Range ◽  
The Family

ABSTRACT Species in the family Capulidae (Littorinimorpha: Capuloidea) display a wide range of shell morphologies. Several species are known to live in association with other benthic invertebrates—mostly bivalves and sabellid worms, but also other gastropods—and are believed to be kleptoparasitic filter feeders that take advantage of the water current produced by the host. This peculiar trophic ecology, implying a sedentary lifestyle, has resulted in highly convergent shell forms. This is particularly true for the genus Hyalorisia Dall, 1889, which occurs in deep water in the Caribbean and Indo-West Pacific provinces, with two nominal species recognized so far. Combining morphological, ecological and molecular data, we assessed the diversity of the genus, its phylogenetic position inside the family and its association with its bivalve host, the genus Propeamussium de Gregorio, 1884 (Pectinoidea), resulting in the description of nine new cryptic species. When sympatric, species of Hyalorisia are associated with different host species, but the same species of Propeamussium may be the host of several allopatric species of Hyalorisia.

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