scholarly journals Deep Reinforcement Learning with Explicit Spatio-Sequential Encoding Network for Coronary Ostia Identification in CT Images

Sensors ◽  
2021 ◽  
Vol 21 (18) ◽  
pp. 6187
Author(s):  
Yeonggul Jang ◽  
Byunghwan Jeon

Accurate identification of the coronary ostia from 3D coronary computed tomography angiography (CCTA) is a essential prerequisite step for automatically tracking and segmenting three main coronary arteries. In this paper, we propose a novel deep reinforcement learning (DRL) framework to localize the two coronary ostia from 3D CCTA. An optimal action policy is determined using a fully explicit spatial-sequential encoding policy network applying 2.5D Markovian states with three past histories. The proposed network is trained using a dueling DRL framework on the CAT08 dataset. The experiment results show that our method is more efficient and accurate than the other methods. blueFloating-point operations (FLOPs) are calculated to measure computational efficiency. The result shows that there are 2.5M FLOPs on the proposed method, which is about 10 times smaller value than 3D box-based methods. In terms of accuracy, the proposed method shows that 2.22 ± 1.12 mm and 1.94 ± 0.83 errors on the left and right coronary ostia, respectively. The proposed method can be applied to the tasks to identify other target objects by changing the target locations in the ground truth data. Further, the proposed method can be utilized as a pre-processing method for coronary artery tracking methods.

2020 ◽  
Author(s):  
Antoine Théberge ◽  
Christian Desrosiers ◽  
Maxime Descoteaux ◽  
Pierre-Marc Jodoin

AbstractDiffusion MRI tractography is currently the only non-invasive tool able to assess the white-matter structural connectivity of a brain. Since its inception, it has been widely documented that tractography is prone to producing erroneous tracks while missing true positive connections. Anatomical priors have been conceived and implemented in classical algorithms to try and tackle these issues, yet problems still remain and the conception and validation of these priors is very challenging. Recently, supervised learning algorithms have been proposed to learn the tracking procedure implicitly from data, without relying on anatomical priors. However, these methods rely on labelled data that is very hard to obtain. To remove the need for such data but still leverage the expressiveness of neural networks, we introduce Track-To-Learn: A general framework to pose tractography as a deep reinforcement learning problem. Deep reinforcement learning is a type of machine learning that does not depend on ground-truth data but rather on the concept of “reward”. We implement and train algorithms to maximize returns from a reward function based on the alignment of streamlines with principal directions extracted from diffusion data. We show that competitive results can be obtained on known data and that the algorithms are able to generalize far better to new, unseen data, than prior machine learning-based tractography algorithms. To the best of our knowledge, this is the first successful use of deep reinforcement learning for tractography.


Energies ◽  
2021 ◽  
Vol 14 (5) ◽  
pp. 1361
Author(s):  
Ajaykumar Unagar ◽  
Yuan Tian ◽  
Manuel Arias Chao ◽  
Olga Fink

Lithium-ion (Li-I) batteries have recently become pervasive and are used in many physical assets. For the effective management of the batteries, reliable predictions of the end-of-discharge (EOD) and end-of-life (EOL) are essential. Many detailed electrochemical models have been developed for the batteries. Their parameters are calibrated before they are taken into operation and are typically not re-calibrated during operation. However, the degradation of batteries increases the reality gap between the computational models and the physical systems and leads to inaccurate predictions of EOD/EOL. The current calibration approaches are either computationally expensive (model-based calibration) or require large amounts of ground truth data for degradation parameters (supervised data-driven calibration). This is often infeasible for many practical applications. In this paper, we introduce a reinforcement learning-based framework for reliably inferring calibration parameters of battery models in real time. Most importantly, the proposed methodology does not need any labeled data samples of observations and the ground truth parameters. The experimental results demonstrate that our framework is capable of inferring the model parameters in real time with better accuracy compared to approaches based on unscented Kalman filters. Furthermore, our results show better generalizability than supervised learning approaches even though our methodology does not rely on ground truth information during training.


2021 ◽  
Vol 13 (10) ◽  
pp. 1966
Author(s):  
Christopher W Smith ◽  
Santosh K Panda ◽  
Uma S Bhatt ◽  
Franz J Meyer ◽  
Anushree Badola ◽  
...  

In recent years, there have been rapid improvements in both remote sensing methods and satellite image availability that have the potential to massively improve burn severity assessments of the Alaskan boreal forest. In this study, we utilized recent pre- and post-fire Sentinel-2 satellite imagery of the 2019 Nugget Creek and Shovel Creek burn scars located in Interior Alaska to both assess burn severity across the burn scars and test the effectiveness of several remote sensing methods for generating accurate map products: Normalized Difference Vegetation Index (NDVI), Normalized Burn Ratio (NBR), and Random Forest (RF) and Support Vector Machine (SVM) supervised classification. We used 52 Composite Burn Index (CBI) plots from the Shovel Creek burn scar and 28 from the Nugget Creek burn scar for training classifiers and product validation. For the Shovel Creek burn scar, the RF and SVM machine learning (ML) classification methods outperformed the traditional spectral indices that use linear regression to separate burn severity classes (RF and SVM accuracy, 83.33%, versus NBR accuracy, 73.08%). However, for the Nugget Creek burn scar, the NDVI product (accuracy: 96%) outperformed the other indices and ML classifiers. In this study, we demonstrated that when sufficient ground truth data is available, the ML classifiers can be very effective for reliable mapping of burn severity in the Alaskan boreal forest. Since the performance of ML classifiers are dependent on the quantity of ground truth data, when sufficient ground truth data is available, the ML classification methods would be better at assessing burn severity, whereas with limited ground truth data the traditional spectral indices would be better suited. We also looked at the relationship between burn severity, fuel type, and topography (aspect and slope) and found that the relationship is site-dependent.


2020 ◽  
Vol 13 (1) ◽  
pp. 26
Author(s):  
Wen-Hao Su ◽  
Jiajing Zhang ◽  
Ce Yang ◽  
Rae Page ◽  
Tamas Szinyei ◽  
...  

In many regions of the world, wheat is vulnerable to severe yield and quality losses from the fungus disease of Fusarium head blight (FHB). The development of resistant cultivars is one means of ameliorating the devastating effects of this disease, but the breeding process requires the evaluation of hundreds of lines each year for reaction to the disease. These field evaluations are laborious, expensive, time-consuming, and are prone to rater error. A phenotyping cart that can quickly capture images of the spikes of wheat lines and their level of FHB infection would greatly benefit wheat breeding programs. In this study, mask region convolutional neural network (Mask-RCNN) allowed for reliable identification of the symptom location and the disease severity of wheat spikes. Within a wheat line planted in the field, color images of individual wheat spikes and their corresponding diseased areas were labeled and segmented into sub-images. Images with annotated spikes and sub-images of individual spikes with labeled diseased areas were used as ground truth data to train Mask-RCNN models for automatic image segmentation of wheat spikes and FHB diseased areas, respectively. The feature pyramid network (FPN) based on ResNet-101 network was used as the backbone of Mask-RCNN for constructing the feature pyramid and extracting features. After generating mask images of wheat spikes from full-size images, Mask-RCNN was performed to predict diseased areas on each individual spike. This protocol enabled the rapid recognition of wheat spikes and diseased areas with the detection rates of 77.76% and 98.81%, respectively. The prediction accuracy of 77.19% was achieved by calculating the ratio of the wheat FHB severity value of prediction over ground truth. This study demonstrates the feasibility of rapidly determining levels of FHB in wheat spikes, which will greatly facilitate the breeding of resistant cultivars.


Sensors ◽  
2021 ◽  
Vol 21 (12) ◽  
pp. 4050
Author(s):  
Dejan Pavlovic ◽  
Christopher Davison ◽  
Andrew Hamilton ◽  
Oskar Marko ◽  
Robert Atkinson ◽  
...  

Monitoring cattle behaviour is core to the early detection of health and welfare issues and to optimise the fertility of large herds. Accelerometer-based sensor systems that provide activity profiles are now used extensively on commercial farms and have evolved to identify behaviours such as the time spent ruminating and eating at an individual animal level. Acquiring this information at scale is central to informing on-farm management decisions. The paper presents the development of a Convolutional Neural Network (CNN) that classifies cattle behavioural states (`rumination’, `eating’ and `other’) using data generated from neck-mounted accelerometer collars. During three farm trials in the United Kingdom (Easter Howgate Farm, Edinburgh, UK), 18 steers were monitored to provide raw acceleration measurements, with ground truth data provided by muzzle-mounted pressure sensor halters. A range of neural network architectures are explored and rigorous hyper-parameter searches are performed to optimise the network. The computational complexity and memory footprint of CNN models are not readily compatible with deployment on low-power processors which are both memory and energy constrained. Thus, progressive reductions of the CNN were executed with minimal loss of performance in order to address the practical implementation challenges, defining the trade-off between model performance versus computation complexity and memory footprint to permit deployment on micro-controller architectures. The proposed methodology achieves a compression of 14.30 compared to the unpruned architecture but is nevertheless able to accurately classify cattle behaviours with an overall F1 score of 0.82 for both FP32 and FP16 precision while achieving a reasonable battery lifetime in excess of 5.7 years.


2021 ◽  
pp. 0021955X2110210
Author(s):  
Alejandro E Rodríguez-Sánchez ◽  
Héctor Plascencia-Mora

Traditional modeling of mechanical energy absorption due to compressive loadings in expanded polystyrene foams involves mathematical descriptions that are derived from stress/strain continuum mechanics models. Nevertheless, most of those models are either constrained using the strain as the only variable to work at large deformation regimes and usually neglect important parameters for energy absorption properties such as the material density or the rate of the applying load. This work presents a neural-network-based approach that produces models that are capable to map the compressive stress response and energy absorption parameters of an expanded polystyrene foam by considering its deformation, compressive loading rates, and different densities. The models are trained with ground-truth data obtained in compressive tests. Two methods to select neural network architectures are also presented, one of which is based on a Design of Experiments strategy. The results show that it is possible to obtain a single artificial neural networks model that can abstract stress and energy absorption solution spaces for the conditions studied in the material. Additionally, such a model is compared with a phenomenological model, and the results show than the neural network model outperforms it in terms of prediction capabilities, since errors around 2% of experimental data were obtained. In this sense, it is demonstrated that by following the presented approach is possible to obtain a model capable to reproduce compressive polystyrene foam stress/strain data, and consequently, to simulate its energy absorption parameters.


2021 ◽  
Vol 13 (9) ◽  
pp. 5274
Author(s):  
Xinyang Yu ◽  
Younggu Her ◽  
Xicun Zhu ◽  
Changhe Lu ◽  
Xuefei Li

Development of a high-accuracy method to extract arable land using effective data sources is crucial to detect and monitor arable land dynamics, servicing land protection and sustainable development. In this study, a new arable land extraction index (ALEI) based on spectral analysis was proposed, examined by ground truth data, and then applied to the Hexi Corridor in northwest China. The arable land and its change patterns during 1990–2020 were extracted and identified using 40 Landsat TM/OLI images acquired in 1990, 2000, 2010, and 2020. The results demonstrated that the proposed method can distinguish arable land areas accurately, with the User’s (Producer’s) accuracy and overall accuracy (kappa coefficient) exceeding 0.90 (0.88) and 0.89 (0.87), respectively. The mean relative error calculated using field survey data obtained in 2012 and 2020 was 0.169 and 0.191, respectively, indicating the feasibility of the ALEI method in arable land extracting. The study found that arable land area in the Hexi Corridor was 13217.58 km2 in 2020, significantly increased by 25.33% compared to that in 1990. At 10-year intervals, the arable land experienced different change patterns. The study results indicate that ALEI index is a promising tool used to effectively extract arable land in the arid area.


2020 ◽  
Vol 3 (S1) ◽  
Author(s):  
Andreas Weigert ◽  
Konstantin Hopf ◽  
Nicolai Weinig ◽  
Thorsten Staake

Abstract Heat pumps embody solutions that heat or cool buildings effectively and sustainably, with zero emissions at the place of installation. As they pose significant load on the power grid, knowledge on their existence is crucial for grid operators, e.g., to forecast load and to plan grid operation. Further details, like the thermal reservoir (ground or air source) or the age of a heat pump installation renders energy-related services possible that utility companies can offer in the future (e.g., detecting wrongly calibrated installations, household energy efficiency checks). This study investigates the prediction of heat pump installations, their thermal reservoir and age. For this, we obtained a dataset with 397 households in Switzerland, all equipped with smart meters, collected ground truth data on installed heat pumps and enriched this data with weather data and geographical information. Our investigation replicates the state of the art in the area of heat pump detection and goes beyond it, as we obtain three major findings: First, machine learning can detect the existence of heat pumps with an AUC performance metric of 0.82, their heat reservoir with an AUC of 0.86, and their age with an AUC of 0.73. Second, heat pump existence can be better detected using data during the heating period than during summer. Third the number of training samples to detect the existence of heat pumps must not be necessarily large in terms of the number of training instances and observation period.


Entropy ◽  
2021 ◽  
Vol 23 (6) ◽  
pp. 737
Author(s):  
Fengjie Sun ◽  
Xianchang Wang ◽  
Rui Zhang

An Unmanned Aerial Vehicle (UAV) can greatly reduce manpower in the agricultural plant protection such as watering, sowing, and pesticide spraying. It is essential to develop a Decision-making Support System (DSS) for UAVs to help them choose the correct action in states according to the policy. In an unknown environment, the method of formulating rules for UAVs to help them choose actions is not applicable, and it is a feasible solution to obtain the optimal policy through reinforcement learning. However, experiments show that the existing reinforcement learning algorithms cannot get the optimal policy for a UAV in the agricultural plant protection environment. In this work we propose an improved Q-learning algorithm based on similar state matching, and we prove theoretically that there has a greater probability for UAV choosing the optimal action according to the policy learned by the algorithm we proposed than the classic Q-learning algorithm in the agricultural plant protection environment. This proposed algorithm is implemented and tested on datasets that are evenly distributed based on real UAV parameters and real farm information. The performance evaluation of the algorithm is discussed in detail. Experimental results show that the algorithm we proposed can efficiently learn the optimal policy for UAVs in the agricultural plant protection environment.


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