scholarly journals Lactococcus garvieae Isolates from Rainbow Trout (Oncorhynchus mykiss, W.) Compared by PLG and SA1B10 PCR Primer Pairs

2021 ◽  
Vol 9 (1) ◽  
pp. 18
Author(s):  
Erbülent Altan ◽  
Jale Korun
Keyword(s):  
Rainbow Trout ◽  
Skin Color ◽  
Biochemical Characterization ◽  
Diffusion Method ◽  
Disk Diffusion Method ◽  
Lactococcus Garvieae ◽  
Rainbow Trout Oncorhynchus Mykiss ◽  
Fish Samples ◽  
Trout Farms ◽  
Positive Results

The aim of this study was to identify and compare Lactococcus garvieae strains using the PLG primer pair and SA1B10 primer pair. Also, the antibiotic resistance of the strains was investigated in the study. For this aim, commercial trout farms at Kemer, Korkuteli, and Manavgat, Antalya Province, Turkey were visited every month from June to September 2018. Thirty sick fish were sampled in the study. Lethargy, anorexia, darkening of skin color, unilateral or bilateral exophthalmos, opacification and hemorrhages in the eyes of the sick fish, and abdominal dropsy were observed. At necropsy, hemorrhages in the internal organs, splenomegaly, and darkening of the spleen and ascites were present. Seventy-five strains from sick fish samples verified on the basis of the biochemical characterization and PCR studies. The strains showed homogeneity in terms of phenotypic characteristics and all strains were identified as Lactococcus garvieae. The PCR technique was applied to 50 of 75 strains using PLG primer pair. While 47 of 50 strains gave positive results, amplification was not observed in 3 strains. When the PCR technique using SA1B10 primer pair was applied to a total of 25 strains, 3 of which were negative, 22 of which gave positive amplification, and 25 strains gave positive results. Resistance was determined by the disk diffusion method. All seventy-five strains were resistant to ampicillin and all strains were susceptible to bacitracin and tetracycline. It was found that the resistance and susceptibility of the strains showed variation to other antibiotics used in the study.Keywords: Lactococcus garvieae; Rainbow Trout; PCR; Antibiotic

scholarly journals Study of pathogenicity and severity of Lactococcus garvieae isolated from rainbow trout (Oncorhynchus mykiss) farms in Kohkilooieh and Boyerahmad province

2019 ◽  
Vol 22 (1) ◽  
Author(s):  
Esmaeil Karami ◽  
Mojtaba Alishahi ◽  
Taravat Molayemraftar ◽  
Masoud Ghorbanpour ◽  
Mohammad Reza Tabandeh ◽  
...  
Keyword(s):  
Rainbow Trout ◽  
Systemic Infection ◽  
Fish Farms ◽  
Pcr Assay ◽  
Biochemical Tests ◽  
High Severity ◽  
Lactococcus Garvieae ◽  
Specific Pcr ◽  
Rainbow Trout Oncorhynchus Mykiss ◽  
Trout Farms

Abstract Background Lactococcus garvieae is one of the most important risk factors in the rainbow trout culture. Therefore, the purpose of this study was to identify and detect strains isolated from rainbow trout suspected of having Lactococcus garvieae using biochemical characteristics and PCR and determination of the degree of severity of isolated strains. Methods In this study, the cause of lactococcosis in selected rainbow trout farms in Kohkilooieh and Boyerahmad province was assayed. Gram-positive and catalase-negative bacterial isolates were first obtained from selected trout fish farms using conventional biochemical tests and PCR assay. The 10-day LD50 method (concentration causing 50% mortality in 10 days) was used to determine the severity of the isolated bacteria. Results One bacterial isolate was detected from all sampled fish which confirmed as Lactococcus garvieae using a specific PCR assay based on the 16S rDNA gene by producing a single band of 1107 bp. Analysis of the rate of mortality showed that the 10-day LD50 was 4.6 × 105 CFU/fish. The results of this study showed that isolated bacteria had high severity for rainbow trout. The presence of bacteria in internal organs of suspected fish showed a severe systemic infection in challenged fish. Antibiogram assay also indicated that the isolated Lactococcus garvieae were resistant to some mostly used antibiotics in rainbow trout. Conclusions According to current research, it can be concluded that the condition of lactococcosis in the studied area is not suitable, and despite the presence of disease, there is no proper action to control and prevent the disease. Unfortunately, isolated bacteria from the studied area have a very high severity compared to bacteria isolated from other regions of the country or other countries. Therefore, further investigation is needed to determine the cause of this difference and possibly in the design of the vaccine.

Prevalence of SHV-extended spectrum β-lactamase producing carbapenem –resistantKlebsiellapneumoniae among patients with lower respiratory tractinfections in Babylon Province-Iraq.

2018 ◽  
Vol 9 (SPL1) ◽  
Author(s):  
Fatima Moeen Abbas
Keyword(s):  
Resistance Rate ◽  
Combination Method ◽  
Diffusion Method ◽  
Disk Diffusion Method ◽  
Carbapenem Resistant ◽  
Extended Spectrum ◽  
Pcr Method ◽  
Polymerase Chain ◽  
Tract Infections ◽  
Positive Results

This study was carried out to screen the prevalence of Klebsiella pneumoniae isolated from patients with lower respiratory tract infections in Babylon province.From December,2015 to the end of March,2016,a total of 100 sputum samples were collected from patients visited or hospitalized Merjan Teaching Hospital and Al- Hashimya General Hospital. Fifteenth (65%) isolates were identified as Klebsiellapneumoniae. All bacterial isolates were evaluated for extended spectrum β-lactamase (ESBL) production phenotypically using disk combination method. Eleven (73.3%) isolates were detected as ESBL-producers. Kirby-Bauer disk diffusion method was employed to determine resistance profile of ESBLs-positive isolates. Higher rates of resistance were observed for ampicillin and piperacillin antibiotics with (81.8%) and (72.7%) resistance rate, respectively, while the lowest rate was noticed for imipenem antibiotic (14.28%). Carbapenem-resistant isolates were investigated for blaSHV gene by Polymerase Chain Reaction (PCR) method, 2 (100%) isolates gave positive results.

scholarly journals Citrobacter tructae sp. nov. Isolated from Kidney of Diseased Rainbow Trout (Oncorhynchus mykiss)

2021 ◽  
Vol 9 (2) ◽  
pp. 275
Author(s):  
Won Joon Jung ◽  
Hyoun Joong Kim ◽  
Sib Sankar Giri ◽  
Sang Guen Kim ◽  
Sang Wha Kim ◽  
...  
Keyword(s):  
Rainbow Trout ◽  
Oncorhynchus Mykiss ◽  
Biochemical Characterization ◽  
Antibiotic Resistance Genes ◽  
Housekeeping Genes ◽  
Rrna Gene ◽  
Bacterial Identification ◽  
Rainbow Trout Oncorhynchus Mykiss ◽  
The 16S Rrna Gene ◽  
Genome Distance

A novel Citrobacter species was isolated from the kidney of diseased rainbow trout (Oncorhynchus mykiss) reared on a trout farm. Biochemical characterization and phylogenetic analysis were performed for bacterial identification. Sequencing of the 16S rRNA gene and five housekeeping genes indicated that the strain belongs to the Citrobacter genus. However, multilocus sequence analysis, a comparison of average nucleotide identity, and genome-to-genome distance values revealed that strain SNU WT2 is distinct and forms a separate clade from other Citrobacter species. Additionally, the phenotype characteristics of the strain differed from those of other Citrobacter species. Quinone analysis indicated that the predominant isoprenoid quinone is Q-10. Furthermore, strain virulence was determined by a rainbow trout challenge trial, and the strain showed resistance to diverse antibiotics including β-lactams, quinolone, and aminoglycosides. The complete genome of strain SNU WT2 is 4,840,504 bp with a DNA G + C content of 51.94% and 106,068-bp plasmid. Genome analysis revealed that the strain carries virulence factors on its chromosome and antibiotic resistance genes on its plasmid. This strain represents a novel species in the genus Citrobacter for which the name C. tructae has been proposed, with SNU WT2 (=KCTC 72517 = JCM 33612) as the type strain.

scholarly journals Weissellosis in rainbow trout in Colombia

2020 ◽  
Vol 13 (3) ◽  
pp. 575-580
Author(s):  
Gersson Vásquez-Machado ◽  
Miguel Rubiano-Garzón ◽  
Jonny Yepes-Blandón ◽  
Daniel Gordillo-González ◽  
Jersson Avila-Coy
Keyword(s):  
Rainbow Trout ◽  
Clinical Signs ◽  
Fish Swimming ◽  
Gram Positive Bacteria ◽  
Rainbow Trout Oncorhynchus Mykiss ◽  
Ocular Lesions ◽  
Intraocular Hemorrhage ◽  
Trout Farms ◽  
Kidney Liver ◽  
Corneal Rupture

Weissellosis is an emergent disease caused by Weissella, a Gram-positive bacteria correlated with hemorrhagic illness and mortality in farm-raised trout in several countries. The current study reports the first outbreaks of weissellosis by Weissella ceti in rainbow trout (Oncorhynchus mykiss), which caused severe mortalities in trout farms in Colombia between May 2016 to June 2019. The disease occurred in several farms irrigated by the same river where temperatures were above 17 °C. Symptoms of the disease were limited almost exclusively to trout above 250 g. The clinical signs consisted of lethargic and anorexic fish, swimming in circles at the surface or against the walls. Pathological findings were mainly ocular lesions like bilateral exophthalmia, periocular and intraocular hemorrhage, lenticular opacity and corneal rupture usually leading to blindness, muscular hemorrhages and necrosis. Microbial isolating from eye, brain, kidney, liver and muscle was performed and W. ceti was confirmed by amplification and sequencing of the 16S rRNA. The aim of this work was to characterize the Weisellosis by Weissella ceti in trouts in Colombia, including microbiological isolating, molecular analysis, gross and microscopic characterization.

Prevalence and antimicrobial resistance of Salmonella and Yersinia in the feces of hunted wildlife in Abeokuta, Nigeria

2019 ◽  
Vol 72 (4) ◽  
Author(s):  
Olufemi Ernest Ojo ◽  
Oluwaseyi Oluwadaisi Ogunjobi ◽  
Mufutau Atanda Oyekunle ◽  
Morenike Atinuke Dipeolu ◽  
Ebenezer Babatunde Otesile
Keyword(s):  
Antimicrobial Resistance ◽  
Clavulanic Acid ◽  
Nalidixic Acid ◽  
Biochemical Characterization ◽  
Diffusion Method ◽  
Wild Rodents ◽  
Culture Methods ◽  
Disk Diffusion Method ◽  
Amoxicillin Clavulanic Acid ◽  
Cricetomys Gambianus

Meat from wildlife contributes significantly to food security and income generation in many African communities. Salmonellae and yersiniae are important causes of foodborne infections. This study investigated the presence and antimicrobial resistance of salmonellae and yersiniae in the fecal contents of hunted wild rodents and ruminants at a wildlife meat-processing center in Abeokuta, Nigeria. Bacteria were isolated and identified by selective culture methods and biochemical characterization. Antimicrobial susceptibility was determined by the Kirby Bauer disk diffusion method. Salmonellae were isolated from 15 (9.8%) and yersiniae from 11 (7.2%) samples out of 153. Salmonellae were detected in nine cane rats (Thryonomys swinderianus), five royal antelopes (Neotragus pygmaeus) and one African giant rat (Cricetomys gambianus). Yersiniae were detected in eight cane rats, two royal antelopes and one waterbuck (Kobus ellipsiprymnus). The levels of resistance in Salmonella isolates were 100% for ampicillin and ceftiofur, 93.3% for tetracycline, 33.3% for cefotaxime, 26.7% for ceftazidime, 13.3% for amoxicillin/clavulanic acid, nalidixic acid and sulfamethoxazole/trimethoprim, and 6.7% for gentamicin, streptomycin and norfloxacin. The levels of resistance in yersiniae isolates were 81.8% for ampicillin, 72.7% for ceftiofur, 63.6% for nalidixic acid, 54.5% for cefotaxime, ceftazidime and sulfamethoxazole/trimethoprim, 36.4% for tetracycline, 27.3% for amoxicillin/clavulanic acid and streptomycin, 18.2% for ciprofloxacin, and 9.1% for chloramphenicol and gentamicin. All the isolates showed multiresistance to antimicrobials from at least three different classes. The detection of antimicrobial resistant salmonellae and yersiniae in wildlife is of veterinary and public health significance as these organisms can be transmitted to domestic animals and humans.

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