Identification of Associations between Clinical Signs and Hosts to Monitor the Web for Detection of Animal Disease Outbreaks

Author(s):  
Elena Arsevska ◽  
Mathieu Roche ◽  
Pascal Hendrikx ◽  
David Chavernac ◽  
Sylvain Falala ◽  
...  

In a context of intensification of international trade and travels, the transboundary spread of emerging human or animal pathogens represents a growing concern. One of the missions of the national veterinary services is to implement international epidemiological intelligence for a timely and accurate detection of emerging animal infectious diseases (EAID) worldwide, and take early actions to prevent their introduction on the national territory. For this purpose, an efficient use of the information published on the web is essential. The authors present a comprehensive method for identification of relevant associations between terms describing clinical signs and hosts to build queries to monitor the web for early detection of EAID. Using text and web mining approaches, they present statistical measures for automatic selection of relevant associations between terms. In addition, expert elicitation is used to highlight the most relevant terms and associations among those automatically selected. The authors assessed the performance of the combination of the automatic approach and expert elicitation to monitor the web for a list of selected animal pathogens.

2016 ◽  
pp. 565-586
Author(s):  
Elena Arsevska ◽  
Mathieu Roche ◽  
Pascal Hendrikx ◽  
David Chavernac ◽  
Sylvain Falala ◽  
...  

In a context of intensification of international trade and travels, the transboundary spread of emerging human or animal pathogens represents a growing concern. One of the missions of the national veterinary services is to implement international epidemiological intelligence for a timely and accurate detection of emerging animal infectious diseases (EAID) worldwide, and take early actions to prevent their introduction on the national territory. For this purpose, an efficient use of the information published on the web is essential. The authors present a comprehensive method for identification of relevant associations between terms describing clinical signs and hosts to build queries to monitor the web for early detection of EAID. Using text and web mining approaches, they present statistical measures for automatic selection of relevant associations between terms. In addition, expert elicitation is used to highlight the most relevant terms and associations among those automatically selected. The authors assessed the performance of the combination of the automatic approach and expert elicitation to monitor the web for a list of selected animal pathogens.


2018 ◽  
Vol 48 (3) ◽  
pp. 84-90 ◽  
Author(s):  
E. A. Lapchenko ◽  
S. P. Isakova ◽  
T. N. Bobrova ◽  
L. A. Kolpakova

It is shown that the application of the Internet technologies is relevant in the selection of crop production technologies and the formation of a rational composition of the machine-and-tractor fl eet taking into account the conditions and production resources of a particular agricultural enterprise. The work gives a short description of the web applications, namely “ExactFarming”, “Agrivi” and “AgCommand” that provide a possibility to select technologies and technical means of soil treatment, and their functions. “ExactFarming” allows to collect and store information about temperature, precipitation and weather forecast in certain areas, keep records of information about crops and make technological maps using expert templates. “Agrivi” allows to store and provide access to weather information in the fi elds with certain crops. It has algorithms to detect and make warnings about risks related to diseases and pests, as well as provides economic calculations of crop profi tability and crop planning. “AgCommand” allows to track the position of machinery and equipment in the fi elds and provides data on the weather situation in order to plan the use of agricultural machinery in the fi elds. The web applications presented hereabove do not show relation between the technologies applied and agro-climatic features of the farm location zone. They do not take into account the phytosanitary conditions in the previous years, or the relief and contour of the fi elds while drawing up technological maps or selecting the machine-and-tractor fl eet. Siberian Physical-Technical Institute of Agrarian Problems of Siberian Federal Scientifi c Center of AgroBioTechnologies of the Russian Academy of Sciences developed a software complex PIKAT for supporting machine agrotechnologies for production of spring wheat grain at an agricultural enterprise, on the basis of which there is a plan to develop a web application that will consider all the main factors limiting the yield of cultivated crops.


Animals ◽  
2021 ◽  
Vol 11 (6) ◽  
pp. 1782
Author(s):  
Sergio Migliore ◽  
Roberto Puleio ◽  
Robin A. J. Nicholas ◽  
Guido R. Loria

Contagious agalactia (CA) is suspected when small ruminants show all or several of the following clinical signs: mastitis, arthritis, keratoconjunctivitis and occasionally abortion. It is confirmed following mycoplasma isolation or detection. The historical and major cause is Mycoplasma agalactiae which was first isolated from sheep in 1923. Over the last thirty years, three other mycoplasmas (Mycoplasma mycoides subsp. capri, Mycoplasma capricolum subsp. capricolum and Mycoplasma putrefaciens) have been added to the etiology of CA because they can occasionally cause clinically similar outcomes though nearly always in goats. However, only M. agalactiae is subject to animal disease regulations nationally and internationally. Consequently, it makes little sense to list mycoplasmas other than M. agalactiae as causes of the OIE-listed CA when they are not officially reported by the veterinary authorities and unlikely to be so in the future. Indeed, encouraging countries just to report M. agalactiae may bring about a better understanding of the importance of CA. In conclusion, we recommend that CA should only be diagnosed and confirmed when M. agalactiae is detected either by isolation or molecular methods, and that the other three mycoplasmas be removed from the OIE Manual of Diagnostic Tests and Vaccines in Terrestrial Animals and associated sources.


2020 ◽  
Vol 5 (4) ◽  
pp. 43-55
Author(s):  
Gianpiero Bianchi ◽  
Renato Bruni ◽  
Cinzia Daraio ◽  
Antonio Laureti Palma ◽  
Giulio Perani ◽  
...  

AbstractPurposeThe main objective of this work is to show the potentialities of recently developed approaches for automatic knowledge extraction directly from the universities’ websites. The information automatically extracted can be potentially updated with a frequency higher than once per year, and be safe from manipulations or misinterpretations. Moreover, this approach allows us flexibility in collecting indicators about the efficiency of universities’ websites and their effectiveness in disseminating key contents. These new indicators can complement traditional indicators of scientific research (e.g. number of articles and number of citations) and teaching (e.g. number of students and graduates) by introducing further dimensions to allow new insights for “profiling” the analyzed universities.Design/methodology/approachWebometrics relies on web mining methods and techniques to perform quantitative analyses of the web. This study implements an advanced application of the webometric approach, exploiting all the three categories of web mining: web content mining; web structure mining; web usage mining. The information to compute our indicators has been extracted from the universities’ websites by using web scraping and text mining techniques. The scraped information has been stored in a NoSQL DB according to a semi-structured form to allow for retrieving information efficiently by text mining techniques. This provides increased flexibility in the design of new indicators, opening the door to new types of analyses. Some data have also been collected by means of batch interrogations of search engines (Bing, www.bing.com) or from a leading provider of Web analytics (SimilarWeb, http://www.similarweb.com). The information extracted from the Web has been combined with the University structural information taken from the European Tertiary Education Register (https://eter.joanneum.at/#/home), a database collecting information on Higher Education Institutions (HEIs) at European level. All the above was used to perform a clusterization of 79 Italian universities based on structural and digital indicators.FindingsThe main findings of this study concern the evaluation of the potential in digitalization of universities, in particular by presenting techniques for the automatic extraction of information from the web to build indicators of quality and impact of universities’ websites. These indicators can complement traditional indicators and can be used to identify groups of universities with common features using clustering techniques working with the above indicators.Research limitationsThe results reported in this study refers to Italian universities only, but the approach could be extended to other university systems abroad.Practical implicationsThe approach proposed in this study and its illustration on Italian universities show the usefulness of recently introduced automatic data extraction and web scraping approaches and its practical relevance for characterizing and profiling the activities of universities on the basis of their websites. The approach could be applied to other university systems.Originality/valueThis work applies for the first time to university websites some recently introduced techniques for automatic knowledge extraction based on web scraping, optical character recognition and nontrivial text mining operations (Bruni & Bianchi, 2020).


Data Mining ◽  
2013 ◽  
pp. 1312-1319
Author(s):  
Marco Scarnò

CASPUR allows many academic Italian institutions located in the Centre-South of Italy to access more than 7 million articles through a digital library platform. The behaviour of its users were analyzed by considering their “traces”, which are stored in the web server log file. Using several web mining and data mining techniques the author discovered a gradual and dynamic change in the way articles are accessed. In particular there is evidence of a journal browsing increase in comparison to the searching mode. Such phenomenon were interpreted using the idea that browsing better meets the needs of users when they want to keep abreast about the latest advances in their scientific field, in comparison to a more generic searching inside the digital library.


2018 ◽  
Vol 34 (2) ◽  
pp. 341-354
Author(s):  
Danelle A. Bickett-Weddle ◽  
Michael W. Sanderson ◽  
Elizabeth J. Parker

Web Mining ◽  
2011 ◽  
pp. 27-49 ◽  
Author(s):  
Penelope Markellou ◽  
Maria Rigou ◽  
Spiros Sirmakessis

The Web has become a huge repository of information and keeps growing exponentially under no editorial control, while the human capability to find, read and understand content remains constant. Providing people with access to information is not the problem; the problem is that people with varying needs and preferences navigate through large Web structures, missing the goal of their inquiry. Web personalization is one of the most promising approaches for alleviating this information overload, providing tailored Web experiences. This chapter explores the different faces of personalization, traces back its roots and follows its progress. It describes the modules typically comprising a personalization process, demonstrates its close relation to Web mining, depicts the technical issues that arise, recommends solutions when possible, and discusses the effectiveness of personalization and the related concerns. Moreover, the chapter illustrates current trends in the field suggesting directions that may lead to new scientific results.


2019 ◽  
pp. 239-253
Author(s):  
Shipra Verma

This paper proposes a framework for an essential creation of a public health information visualization platform, for Japanese Encephalitis (JE) disease outbreaks in the Gorakhpur district, India. The Web GIS technology is used with ERDAS Apollo 2010 software at customized level, to develop architecture for Web GIS-based public health information systems. A GUI has been created using Java Server Pages (JSP) for its customization. This will help in extending the benefit of GIS and Web technology for public availability in the area for preparation of the health plan in multitier system.


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