Manipulation of rhizosphere organisms to enhance glomalin production and C sequestration: Pitfalls and promises

2014 ◽  
Vol 94 (6) ◽  
pp. 1025-1032 ◽  
Author(s):  
F. L. Walley ◽  
A. W. Gillespie ◽  
Adekunbi B. Adetona ◽  
J. J. Germida ◽  
R. E. Farrell
Keyword(s):  
Plant Growth ◽  
Mycorrhizal Fungi ◽  
Plant Growth Promoting Rhizobacteria ◽  
C Sequestration ◽  
Ionization Mass ◽  
Edge Structure ◽  
Organic C ◽  
Soil C ◽  
N Storage ◽  
C And N

Walley, F. L., Gillespie, A. W., Adetona, A. B., Germida, J. J. and Farrell, R. E. 2014. Manipulation of rhizosphere organisms to enhance glomalin production and C-sequestration: Pitfalls and promises. Can. J. Plant Sci. 94: 1025–1032. Arbuscular mycorrhizal fungi (AMF) reportedly produce glomalin, a glycoprotein that has the potential to increase soil carbon (C) and nitrogen (N) storage. We hypothesized that interactions between rhizosphere microorganisms, such as plant growth-promoting rhizobacteria (PGPR), and AMF, would influence glomalin production. Our objectives were to determine the effects of AMF/PGPR interactions on plant growth and glomalin production in the rhizosphere of pea (Pisum sativum L.) with the goal of enhancing C and N storage in the rhizosphere. One component of the study focussed on the molecular characterization of glomalin and glomalin-related soil protein (GRSP) using complementary synchrotron-based N and C X-ray absorption near-edge structure (XANES) spectroscopy, pyrolysis field ionization mass spectrometry (Py-FIMS), and proteomics techniques to characterize specific organic C and N fractions associated with glomalin production. Our research ultimately led us to conclude that the proteinaceous material extracted, and characterized in the literature, as GRSP is not exclusively of AMF origin. Our research supports the established concept that GRSP is important to soil quality, and C and N storage, irrespective of origin. However, efforts to manipulate this important soil C pool will remain compromised until we more clearly elucidate the chemical nature and origin of this resource.

Management effects on the dynamics and storage rates of organic matter in long-term crop rotations

2004 ◽  
Vol 84 (1) ◽  
pp. 49-61 ◽  
Author(s):  
E. A. Paul ◽  
H. P. Collins ◽  
K. Paustian ◽  
E. T. Elliott ◽  
S. Frey ◽  
...  
Keyword(s):  
Organic Matter ◽  
C Sequestration ◽  
Organic C ◽  
Soil C ◽  
Site Analysis ◽  
Laboratory Incubation ◽  
C And N ◽  
A Site ◽  
Management Effects

Factors controlling soil organic matter (SOM) dynamics in soil C sequestration and N fertility were determined from multi-site analysis of long-term, crop rotation experiments in Western Canada. Analyses included bulk density, organic and inorganic C and N, particulate organic C (POM-C) and N (POM -N), and CO2-C evolved during laboratory incubation. The POM-C and POM-N contents varied with soil type. Differences in POM-C contents between treatments at a site (δPOM-C) were related (r2= 0.68) to treatment differences in soil C (δSOC). The CO2-C, evolved during laboratory incubation, was the most sensitive indicator of management effects. The Gray Luvisol (Breton, AB) cultivated plots had a fivefold difference in CO2-C release relative to a twofold difference in soil organic carbon (SOC). Soils from cropped, Black Chernozems (Melfort and Indian Head, SK) and Dark Brown Chernozems (Lethbridge, AB) released 50 to 60% as much CO2-C as grassland soils. Differences in CO2 evolution from the treatment with the lowest SOM on a site and that of other treatments (δCO2-C) in the early stages of the incubation were correlated to δPOM-C and this pool reflects short-term SOC storage. Management for soil fertility, such as N release, may differ from management for C sequestration. Key words: Multi-site analysis, soil management, soil C and N, POM-C and N, CO2 evolution

scholarly journals Carbon and nitrogen pools in thermokarst-affected permafrost landscapes in Arctic Siberia

2017 ◽  
Author(s):  
Matthias Fuchs ◽  
Guido Grosse ◽  
Jens Strauss ◽  
Frank Günther ◽  
Mikhail Grigoriev ◽  
...  
Keyword(s):  
Soil Column ◽  
Mineral Soil ◽  
Organic Soil ◽  
Permafrost Soil ◽  
Organic C ◽  
Soil C ◽  
N Storage ◽  
The North ◽  
C And N ◽  
Soil Accumulation

Abstract. Ice rich Yedoma-dominated landscapes store considerable amounts of organic carbon (C) and nitrogen (N) and are vulnerable to degradation under climate warming. We investigate the C and N pools in two thermokarst-affected Yedoma landscapes – on Sobo-Sise Island and on Bykovsky Peninsula in the North of East Siberia. Soil cores up to three meters depth were collected along geomorphic gradients and analysed for organic C and N contents. A high vertical sampling density in the profiles allowed the calculation of C and N stocks for short soil column intervals and enhanced understanding of within-core parameter variability. Profile-level C and N stocks were scaled to the landscape level based on landform classifications from five-meter resolution, multispectral RapidEye satellite imagery. Mean landscape C and N storage in the first meter of soil for Sobo-Sise Island is estimated to be 20.2 kg C m−2 and 1.8 kg N m−2 and for Bykovsky Peninsula 25.9 kg C m−2 and 2.2 kg N m−2. Radiocarbon dating demonstrates the Holocene age of thermokarst basin deposits but also suggests the presence of thick Holocene aged cover layers which can reach up to two meters on top of intact Yedoma landforms. Reconstructed sedimentation rates of 0.10 mm yr−1–0.57 mm yr−1 suggest sustained mineral soil accumulation across all investigated landforms. Both Yedoma and thermokarst landforms are characterized by limited accumulation of organic soil layers (peat). We further estimate that an active layer deepening by about 100 cm will increase organic C availability in a seasonally thawed state in the two study areas by ~ 5.8 Tg (13.2 kg C m−2). Our study demonstrates the importance of increasing the number of C and N storage inventories in ice-rich Yedoma and thermokarst environments in order to account for high variability of permafrost and thermokarst environments in pan-permafrost soil C and N pool estimates.

scholarly journals Carbon and nitrogen pools in thermokarst-affected permafrost landscapes in Arctic Siberia

2018 ◽  
Vol 15 (3) ◽  
pp. 953-971 ◽  
Author(s):  
Matthias Fuchs ◽  
Guido Grosse ◽  
Jens Strauss ◽  
Frank Günther ◽  
Mikhail Grigoriev ◽  
...  
Keyword(s):  
Soil Column ◽  
Mineral Soil ◽  
Organic Soil ◽  
Permafrost Soil ◽  
Organic C ◽  
Soil C ◽  
N Storage ◽  
The North ◽  
C And N ◽  
Soil Accumulation

Abstract. Ice-rich yedoma-dominated landscapes store considerable amounts of organic carbon (C) and nitrogen (N) and are vulnerable to degradation under climate warming. We investigate the C and N pools in two thermokarst-affected yedoma landscapes – on Sobo-Sise Island and on Bykovsky Peninsula in the north of eastern Siberia. Soil cores up to 3 m depth were collected along geomorphic gradients and analysed for organic C and N contents. A high vertical sampling density in the profiles allowed the calculation of C and N stocks for short soil column intervals and enhanced understanding of within-core parameter variability. Profile-level C and N stocks were scaled to the landscape level based on landform classifications from 5 m resolution, multispectral RapidEye satellite imagery. Mean landscape C and N storage in the first metre of soil for Sobo-Sise Island is estimated to be 20.2 kg C m−2 and 1.8 kg N m−2 and for Bykovsky Peninsula 25.9 kg C m−2 and 2.2 kg N m−2. Radiocarbon dating demonstrates the Holocene age of thermokarst basin deposits but also suggests the presence of thick Holocene-age cover layers which can reach up to 2 m on top of intact yedoma landforms. Reconstructed sedimentation rates of 0.10–0.57 mm yr−1 suggest sustained mineral soil accumulation across all investigated landforms. Both yedoma and thermokarst landforms are characterized by limited accumulation of organic soil layers (peat). We further estimate that an active layer deepening of about 100 cm will increase organic C availability in a seasonally thawed state in the two study areas by  ∼  5.8 Tg (13.2 kg C m−2). Our study demonstrates the importance of increasing the number of C and N storage inventories in ice-rich yedoma and thermokarst environments in order to account for high variability of permafrost and thermokarst environments in pan-permafrost soil C and N pool estimates.

Role of root inputs from a dinitrogen-fixing tree in soil carbon and nitrogen sequestration in a tropical agroforestry system

Soil Research ◽  
2005 ◽  
Vol 43 (5) ◽  
pp. 667 ◽  
Author(s):  
Jorge Sierra ◽  
Pekka Nygren
Keyword(s):  
Root Biomass ◽  
Nutrient Recycling ◽  
Soil Layer ◽  
C Sequestration ◽  
Agroforestry System ◽  
Tree Roots ◽  
Organic C ◽  
Soil C ◽  
C And N ◽  
Soil C Sequestration

Agroforestry is often mentioned as a suitable technology for land rehabilitation in the tropics and for mitigation of climate change because this land-use favours nutrient recycling and C sequestration. The aim of this work was to estimate soil C sequestration in a 12-year-old tropical silvopastoral system composed of a legume tree (Gliricidia sepium) and a C4 fodder grass (Dichanthium aristatum), and to link it with tree root biomass and N status in the soil. The site was under cut-and-carry management, i.e. tree pruning residues and cut grass were removed from the field and fed to stabled animals elsewhere. Thus, main sources for tree C and N inputs were root activity and turnover. Organic C derived from the trees and tree root biomass were determined based on natural 13C abundance. For the 0–0.2 m soil layer, the biomass of tree roots ≤2 mm diameter was 2.4 Mg/ha when the trees were pruned every 6 months (SS6), and 0.6 Mg/ha when pruned every 2 months (SS2). Both C (R2 = 0.39, P < 0.05) and N (R2 = 0.82, P < 0.05) sequestration were correlated with tree root biomass. The trees and grass contributed 18 and 8 Mg C/ha to soil, respectively, over the 12-year experiment in SS6. The net increase of 2.5 Mg N/ha in soil, originating from the trees, contributed to the net soil C sequestration. In SS2, trees contributed 16 Mg C/ha to soil over 12 years, but grass-derived C was reduced by 2 Mg C/ha because of the small amount of grass litter. The increase of 1.7 Mg N/ha in soil, derived from the trees, was not large enough to avoid C loss in this plot. Differences in soil C and N sequestration between plots were due to differences in system management, which affected the amount and the C/N ratio of inputs and outputs.

scholarly journals Plant Growth-Promoting Microorganisms in Coffee Production: From Isolation to Field Application

Agronomy ◽  
2021 ◽  
Vol 11 (8) ◽  
pp. 1531
Author(s):  
Narcisa Urgiles-Gómez ◽  
María Eugenia Avila-Salem ◽  
Paúl Loján ◽  
Max Encalada ◽  
Leslye Hurtado ◽  
...  
Keyword(s):  
Plant Growth ◽  
Mycorrhizal Fungi ◽  
Arbuscular Mycorrhizal ◽  
Plant Growth Promoting Rhizobacteria ◽  
Agroforestry Systems ◽  
Field Application ◽  
Coffee Production ◽  
Coffee Agroforestry ◽  
Plant Growth Promoting ◽  
Growth Promoting

Coffee is an important, high-value crop because its roasted beans are used to produce popular beverages that are consumed worldwide. Coffee plantations exist in over 70 countries and constitute the main economic activity of approximately 125 million people. Currently, there is global concern regarding the excessive use of agrochemicals and pesticides in agriculture, including coffee crops. This situation has motivated researchers, administrators, and farmers to seek ecologically friendly alternatives to decrease the use of synthetic fertilizers and pesticides. In the last decades, multiple studies of the rhizosphere, at the chemical, physical and biological levels, have improved our understanding of the importance of beneficial microorganisms to plant health and growth. This review aims to summarize the state of the use of plant growth-promoting microorganisms (PGPM) in coffee production, where the most extensively studied microorganisms are beneficial plant growth-promoting rhizobacteria (PGPR) and arbuscular mycorrhizal fungi (AMF). This review also contains information on PGPM, in regard to plantations at different latitudes, isolation techniques, mass multiplication, formulation methods, and the application of PGPM in nurseries, monoculture, and coffee agroforestry systems. Finally, this review focuses on relevant research performed during the last decade that can help us improve sustainable coffee production.

Comparison of carbon and nitrogen storage in mineral soils of graminoid and shrub tundra sites, western Greenland

2016 ◽  
Vol 2 (4) ◽  
pp. 165-182 ◽  
Author(s):  
Chelsea L. Petrenko ◽  
Julia Bradley-Cook ◽  
Emily M. Lacroix ◽  
Andrew J. Friedland ◽  
Ross A. Virginia
Keyword(s):  
Vegetation Type ◽  
Mineral Soil ◽  
Biotic Interactions ◽  
The Arctic ◽  
Soil C ◽  
N Storage ◽  
C Storage ◽  
Arctic Soils ◽  
C Pools ◽  
C And N

Shrub species are expanding across the Arctic in response to climate change and biotic interactions. Changes in belowground carbon (C) and nitrogen (N) storage are of global importance because Arctic soils store approximately half of global soil C. We collected 10 (60 cm) soil cores each from graminoid- and shrub-dominated soils in western Greenland and determined soil texture, pH, C and N pools, and C:N ratios by depth for the mineral soil. To investigate the relative chemical stability of soil C between vegetation types, we employed a novel sequential extraction method for measuring organo-mineral C pools of increasing bond strength. We found that (i) mineral soil C and N storage was significantly greater under graminoids than shrubs (29.0 ± 1.8 versus 22.5 ± 3.0 kg·C·m−2 and 1.9 ± .12 versus 1.4 ± 1.9 kg·N·m−2), (ii) chemical mechanisms of C storage in the organo-mineral soil fraction did not differ between graminoid and shrub soils, and (iii) weak adsorption to mineral surfaces accounted for 40%–60% of C storage in organo-mineral fractions — a pool that is relatively sensitive to environmental disturbance. Differences in these C pools suggest that rates of C accumulation and retention differ by vegetation type, which could have implications for predicting future soil C pool storage.

Site-level simulations of measurable soil fractions with the Millennial V2 soil model

2021 ◽  
Author(s):  
Rose Abramoff ◽  
Bertrand Guenet ◽  
Haicheng Zhang ◽  
Katerina Georgiou ◽  
Xiaofeng Xu ◽  
...  
Keyword(s):  
C Sequestration ◽  
Current Understanding ◽  
Residence Times ◽  
Century Model ◽  
Mineral Association ◽  
Organic C ◽  
Soil C ◽  
Soil Fractions ◽  
Soil Model ◽  
Mean Residence Times

&lt;p&gt;Soil carbon (C) models are used to predict C sequestration responses to climate and land use change. Yet, the soil models embedded in Earth system models typically do not represent processes that reflect our current understanding of soil C cycling, such as microbial decomposition, mineral association, and aggregation. Rather, they rely on conceptual pools with turnover times that are fit to bulk C stocks and/or fluxes. As measurements of soil fractions become increasingly available, it is necessary for soil C models to represent these measurable quantities so that model processes can be evaluated more accurately. Here we present Version 2 (V2) of the Millennial model, a soil model developed in 2018 to simulate C pools that can be measured by extraction or fractionation, including particulate organic C, mineral-associated organic C, aggregate C, microbial biomass, and dissolved organic C. Model processes have been updated to reflect the current understanding of mineral-association, temperature sensitivity and reaction kinetics, and different model structures were tested within an open-source framework. We evaluated the ability of Millennial V2 to simulate total soil organic C (SOC), as well as the mineral-associated and particulate fractions, using three independent data sets of soil fractionation measurements spanning a range of climate and geochemistry in Australia (N=495), Europe (N=176), and across the globe (N=716). Considering RMSE and AIC as indices of model performance, site-level evaluations show that Millennial V2 predicts soil organic carbon content better than the widely-used Century model, despite an increase in process complexity and number of parameters. Millennial V2 also reproduces between-site variation in SOC across gradients of climate, plant productivity, and soil type. By including the additional constraints of measured soil fractions, we can predict site-level mean residence times similar to a global distribution of mean residence times measured using SOC/respiration rate under an assumption of steady state. The Millennial V2 model updates the conceptual Century model pools and processes and represents our current understanding of the roles that microbial activity, mineral association and aggregation play in soil C sequestration.&lt;/p&gt;

Decoupled Soil Labile Carbon and Nitrogen Dynamics Triggered by Urban Vegetation

2021 ◽  
Author(s):  
Xiaolin Dou ◽  
Meng Lu ◽  
Liding Chen
Keyword(s):  
Land Use ◽  
Urban Forest ◽  
Urban Ecosystems ◽  
Isotopic Analysis ◽  
C Sequestration ◽  
Bare Soil ◽  
N Dynamics ◽  
Soil C ◽  
Soil C And N ◽  
C And N

Abstract Purpose Studies about soil carbon (C) and nitrogen (N) dynamics with land use change are urgently needed for urban ecosystems. We used fractionation of soils combined with stable isotopic analysis to examine soil C and N cycles after decadal forest and lawn planting in the Pearl River Delta, China. Methods Soil samples from bare soil (CK) and four land use treatments (55 and 20 years of forest plantation, F-55 and F-20; 55 and 20 years of lawn plantation, L-55 and L-20) were split into different chemical fractions. Then we analyzed the C and N contents, C/N ratio, δ13C and δ15N, C and N recalcitrant indices (RIC, RIN), and a C pool management index (CPMI).Results Forest vegetation substantially enhanced soil organic carbon (SOC) caused by the recalcitrant (RC) and labile C (LC) pools, while the larger soil organic nitrogen (SON) was ascribed to the increased recalcitrant N (RN). Enhanced LC but minor changes in labile N (LN) suggested a decoupled C and N in labile fractions of the forest soils. In contrast, the larger LN, and the enhanced decomposition of SOC, indicated that the lawns may have inhibited N mineralization of labile pools, also suggesting a decoupled C and N turnover and leading to low RIN values. Conclusions Urban forest and lawn plantations significantly changed the soil C and N dynamics, and emphasized the inconsistency between C and N processes, especially in labile pools, which would eventually lead to minor changes in N and limit the ecosystem C sequestration.

Site-level simulations of measurable soil fractions with Millennial Version 2

2021 ◽  
Author(s):  
Rose Abramoff ◽  
Bertrand Guenet ◽  
Haicheng Zhang ◽  
Katerina Georgiou ◽  
Xiaofeng Xu ◽  
...  
Keyword(s):  
Meta Analysis ◽  
C Sequestration ◽  
Current Understanding ◽  
Century Model ◽  
Mineral Association ◽  
Microbial Decomposition ◽  
Organic C ◽  
Soil C ◽  
Soil Fractions ◽  
C Stocks

&lt;p&gt;Soil carbon (C) models are used to predict C sequestration responses to climate and land use change. Yet, the soil models embedded in Earth system models typically do not represent processes that reflect our current understanding of soil C cycling, such as microbial decomposition, mineral association, and aggregation. Rather, they rely on conceptual pools with turnover times that are fit to bulk C stocks and/or fluxes. As measurements of soil fractions become increasingly available, soil C models that represent these measurable quantities can be evaluated more accurately. Here we present Version 2 (V2) of the Millennial model, a soil model developed to simulate C pools that can be measured by extraction or fractionation, including particulate organic C, mineral-associated organic C, aggregate C, microbial biomass, and dissolved organic C. Model processes have been updated to reflect the current understanding of mineral-association, temperature sensitivity and reaction kinetics, and different model structures were tested within an open-source framework. We evaluated the ability of Millennial V2 to simulate total soil organic C (SOC), as well as the mineral-associated and particulate fractions, using three soil fractionation data sets spanning a range of climate and geochemistry in Australia (N=495), Europe (N=176), and across the globe (N=730). Millennial V2 (RMSE = 1.98 &amp;#8211; 4.76 kg, AIC = 597 &amp;#8211; 1755) generally predicts SOC content better than the widely-used Century model (RMSE = 2.23 &amp;#8211; 4.8 kg, AIC = 584 &amp;#8211; 2271), despite an increase in process complexity and number of parameters. Millennial V2 reproduces between-site variation in SOC across a gradient of plant productivity, and predicts SOC turnover times similar to those of a global meta-analysis. Millennial V2 updates the conceptual Century model pools and processes and represents our current understanding of the roles that microbial activity, mineral association and aggregation play in soil C sequestration.&lt;/p&gt;

Sign in / Sign up

Export Citation Format

Share Document