scholarly journals Determination of allelic variants of gene Glu-1 in hybrid families, bearing gene Gpc-B1 of Triticum turgidum ssp. dicoccoides

1970 ◽  
Vol 21 ◽  
pp. 168-173
Author(s):  
S. Yu. Pokhylko ◽  
A. I. Stepanenko ◽  
O. M. Dugan ◽  
B. V. Morgun

Aim. The aim of our study was to analyze the hybrid families of generation F5 carrying gene Gpc-B1 of Triticum turgidum ssp. dicoccoides for the allelic state of Glu-1, to calculate 1000 kernel weight and to select families with the best set of alleles and performance. Methods. Polymerase chain reaction for molecular genetic analysis and calculation of the 1,000-kernel weight for wheat grain yields were used. Results. Determination of the three loci Glu-A1, Glu-B1, Glu-D1 shows that among 44 hybrid families it is possible to identify 16 most promising families that have the most valuable allelic variants. Furthemore, given the analysis of the 1,000-kernel weight, two families (#36 and 40) having the highest values can be selected among those 16 families. Conclusions. The results of study enable a comprehensive approach to the selection of progeny with the best genetic base, which will be used in breeding of soft winter wheat later on. Keywords: Triticum aestivum L., gene Gpc-B1, Glu-1 loci, PCR, molecular markers.

2021 ◽  
Vol 3 (27) ◽  
pp. 117-124
Author(s):  
A.S. Lyzhin ◽  
◽  
I.V. Luk'yanchuk ◽  

An important consumer trait of strawberry fruits is their aroma. Among the most important strawberry fruit aroma compounds are γ-decalactone and mesifurane. The content of γ-decalactone in fruits is controlled by the expression of the FaFAD1 gene. The content of mesifurane in fruits is controlled by the FaOMT gene. Identification of genotypes carrying the target alleles of the aromatic complex genes is an important stage in improving the strawberry assortment and creating strawberry varieties with aromatic fruits. The purpose of the study is molecular genetic analysis of strawberry hybrid seedlings by the FaOMT and FaFAD1 genes to identify genotypes promising in breeding for fruit aroma. Promising selected and elite forms of strawberry (Fragaria × ananassa Duch.) created at the FSSI “I.V. Michurin FSC” were used as biological objects. To identify the allelic state FaOMT gene, the codominant molecular marker FaOMT-SI/NO was used. To identify FaFAD1 gene, the molecular marker FaFAD1 was used. Using the FaOMT-SI/NO marker, the functional allele of the FaOMT gene (FaOMT+) was identified in the following strawberry selected forms: 298-19-9-43 (FB2 F. orientalis Los., F. moschata Duch., F. × ananassa Duch.), 932-29 (F. virginiana subsp. platypetala (Rydb.) Staudt × ‘Feyerverk’), 928-12 (298-19-9-43 × ‘Privlekatelnaya’), 69-29 (‘Feyerverk’× ‘Bylinnaya’), 72-25, 72-71 (‘Privlekatelnaya’ × ‘Bylinnaya’) and 26-5 (‘Rubinovyy kulon’× 298-19-9-43). The FaFAD1 gene was identified in strawberry hybrids 72-25 (‘Privlekatelnaya’ × ‘Bylinnaya’), 56-8 (‘Gigantella’ × ‘Privlekatelnaya’) and 61-12 (‘Bylinnaya’ × ‘Olimpiyskaya nadezhda’). The strawberry selected form 72-25 (‘Privlekatelnaya’ × ‘Bylinnaya’) is characterized by a combination of functional alleles of both genes (FaOMT + FaFAD1). Involvement of these forms in hybridization will make it possible to intensify the process of creating new strawberry varieties with improved fruit aroma.


1970 ◽  
Vol 19 (1) ◽  
pp. 35-44 ◽  
Author(s):  
S. Mitra ◽  
K. M. Nasiruddin ◽  
E. H. Chowdhury

RAPD assay was conducted for molecular genetic analysis of six wheat cultivars, such as, Kanchan, Sourav, Gourab, Shatabdi, Pavon and BAW-1006 to observe genetic variability and relatedness among these cultivars. Three out of 12 decamer random primers showed distinctly polymorphic bands when used to amplify genomic DNA. The primers yielded a total of 23 RAPD markers of which 14 were considered as polymorphic. The proportion of polymorphic loci and gene diversity (h) values were 34.78% and 0.153 for BAW-1006, 30.43% and 0.124 for Kanchan, 26.09% and 0.127 for Shatabdi, 26.09% and 0.127 for Pavon, 26.09% and 0.111 for Gourab, 21.74% and 0.098 for Sourav, respectively. The coefficient of gene differentiation (Gst) and gene flow (Nm) values across all the loci were 0.50 and 0.50, respectively indicating genetic divergence among populations. The UPGMA  dendrogram  based  on Nei’s  genetic distance, grouped  six cultivars into two main clusters:  Kanchan, Sourav, Gourab  and Shatabdi  in cluster I; Pavon and BAW-1006 in cluster II. The cluster I was further separated: Kanchan alone in sub-cluster I and Sourav, Gourab, Shatabdi in sub-cluster II; furthermore, Sourab and Gourab grouped together in sub-sub-cluster I of sub-cluster II with the lowest genetic distance of 0.035. Thus, RAPD offer a potentially simple, rapid and reliable method to evaluate genetic variation and relatedness among six wheat cultivars.  Key words: RAPD, genetic diversity, polymorphic loci, wheat D.O.I. 10.3329/ptcb.v19i1.4915 Plant Tissue Cult. & Biotech. 19(1): 35-44, 2009 (June)


2017 ◽  
Vol 54 ◽  
pp. 216-221 ◽  
Author(s):  
Yu. V. Gyzieev ◽  
О. V. Sydorenko ◽  
L. V. Vishnevsky

In Ukraine, especially in certain natural and climatic zones, an important role in the production of food and social life of the population is played by the Carpathian Brown breed of cattle that extremely efficiently uses the natural pastures of the Carpathians. Animals of this breed have unique biological characteristics, resistant to diseases, have high resistance, the ability to withstand stress, have a strong constitution, a high duration of productive use, reproductive and adaptive ability, the content of protein in milk, available for chewing the kappa-casein fraction, good parameters for realization of genetic potential. The Carpathian Brown cattle with its high adaptability to the environment deserve the preservation and sustainable use, and for this purpose it is necessary to create a reliable genetic foundation. Moreover, it is important to know the genetic features of animals that are intended to produce specific products and still remain a significant functional element of the production system in the region. The gene kappa-casein is one of the few known genes, is uniquely associated with the signs of protein digestibility and technological properties of milk. Allele In the kappa-casein gene is associated with a higher protein content in milk, a higher yield of cheese, as well as better coagulation properties of milk. The purpose of this work was to establish the genotypes and to determine the genetic structure of the population of the Carpathian Brown breeders for the gene of kappa-casein (CSN3) with the determination of the possibility of their further use. The material for research was the semen of the bulls of Carpathian Brown breed (n = 21 heads), which originate from the leading tribal herds of the Zakarpattia oblast and evaluated by origin, by their own productivity at the Zakarpattia Regional State Tribal Station (now Private Joint-stock company "Zakarpatske plempidpryyemstvo"). In accordance with FAO recommendations for assessing the risk status of animal genetic resources and calculations carried out, a brown Carpathian breed of cattle is in the critical state of risk of disappearance. This status depends on the effective size of the population, the number of females and males, trends in the dynamics of their changes and the way breeder breeding work. In 2005 in 16 controllable herds of Zakarpattia and Ivano-Frankivsk oblasts there were 2866 heads of cattle of Carpathian Brown breed, including 1083 cows. And since 2014 according to the State Register of subjects of breeding business in livestock breeding, no breeding farm has left in Ukraine for breeding this kind of breed and there is no program of breeding the pedigrees. The breeding stock of Carpathian Brown breed is breeding only in private peasant farms. According to FAO recommendations, a part of the genetic material from the breeders of the brown Carpathian breed that belongs to Private Joint-stock company "Zakarpatske plempidpryyemstvo" was deposited in the Bank of Animals of Genetic Resources of Institute of Animal Breeding and Genetics nd. a. M.V.Zubets of NAAS. According to the data provided in the section "Reserve gene pool" of the Catalog of bulls of dairy and dairy-meat breeds, allowed to reproduce the mother stock in 2017, information is provided on 28 bulls of Carpathian Brown breed with available semen. Therefore, taking into account the results of the monitoring and analysis carried out, it should be noted that the possibility of restoration of the stock breed stock of Carpathian Brown breed has not been lost. Carpathian Brown breed as a local breed requires systematic population-genetic monitoring. The genetic material of the breeders of Carpathian Brown breed according to the genealogical structure is diverse and belongs to 12 lines. The most numerous representatives of the fruit of the lines of the Sokola 553 i Malchyka 3, Kaplera 43, Stretcha 143612, Fitsko 33, Pishty 10, Eleyma 110327, Raneta 584, Rupora 6507, Siroho 1759, Shoni 6 i Yu. Yuvelira 273, which at one time were the most widespread in the breed. Representatives of these lines for the CSN3 gene revealed polymorphism of all possible variants of the genotypes AA, AB and BB. According to the results of molecular genetic analysis, determination of frequency of distribution of genotypes and alleles of bulls of Carpathian Brown breed according to the gene of kapa-casein CSN3 has been determined. The frequency of the desired genotype BB among the examined animals was 0.143, and the frequency of carriers of the genotype AA was 0.381. Frequency of carriers of the heterozygous genotype AB was 0.476. The carrier frequency of the allele A in the animals tested is 0.619, which is twice as high as the allele B frequency of 0.381. By Hardy-Weinberg law, we did not determine the probable difference between the actual and expected distribution of genotype frequencies for the CSN3 gene. Conclusions on the basis of the analysis of the established genotypes and the determined frequency of allelic variants for the kappa-casein (CSN3) gene in the explored bogs of Carpathian Brown breed Private Joint-stock company "Zakarpatske plempidpryyemstvo" it was revealed that the available genetic resources of the pedigrees are quite varied according to the genealogical and genetic structure.


Medicina ◽  
2019 ◽  
Vol 55 (10) ◽  
pp. 612
Author(s):  
Daneberga ◽  
Berzina ◽  
Borosenko ◽  
Krumina ◽  
Kokaine-Sapovalova ◽  
...  

Background and objectives: Familial adenomatous polyposis is one of the APC-associated polyposis conditions described as genetically predetermined colorectal polyposis syndrome with a variety of symptoms. The purpose of this study was to determine sequence variants of the APC gene in patients with familial adenomatous polyposis (FAP) phenotype and positive or negative family history. Materials and Methods: Eight families with defined criteria of adenomatous polyposis underwent molecular genetic testing. Coding regions and flanking intron regions of the APC gene were analyzed by Sanger sequencing. Results: Eight allelic variants of the APC gene coding sequence were detected. All allelic variants of the APC gene were predicted to be pathogenic based on criteria according to the “Joint Consensus Recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology” (2015), four of them c.1586_1587insAT, c.2336delT, c.3066_3067insGA, and c.4303_4304insC, were considered novel. Conclusions: The timely molecular genetic analysis of APC germline variants and standardized interpretation of the pathogenicity of novel allelic variants has a high impact on choice for treatment, cancer prevention, and family genetic counseling.


2020 ◽  
Vol 26 ◽  
pp. 222-227
Author(s):  
A. G. Komisarenko ◽  
S. I. Mykhalska ◽  
V. M. Kurchii ◽  
O. O. Khrystan

Aim. To investigate inheritance of transgenes in the first generation (T1) of winter wheat biotechnological plants (Triticum aestivum L.). Analyze the performance of T1 genetically modified plants with a double stranded RNA suppressor of the proline dehydrogenase (pdh) gene under normal growing conditions. Methods. PCR analysis, DNA electrophoresis; determination of indicators of the structure of the crop. Results. Molecular genetic analysis was performed and the performance indicators of control and T1 biotechnological plants were investigated. Conclusions. The first generation of genetically modified winter wheat plants resulting from Agrobacterium-mediated transformation in planta confirmed the inheritance of integrated genes. Among the transgenic variants identified plants that lack some fragments of the target gene required for partial suppression of the gene of proline dehydrogenase wheat. It is shown that at the optimal terms of growing biotechnological plants of wheat winter-annual of UK 322/17 and UK 209 h was characterized by the best indexes of structure of harvest as compared to an initial form, while the genetically changed plants of genotypes of UK 95/17 and UK 065 after the elements of the productivity did not differ from control plants. Keywords: Triticum aestivum L., biotechnological plants, T-DNA, proline dehydrogenase gene, structural analysis indicators.


1973 ◽  
Vol 53 (4) ◽  
pp. 755-762 ◽  
Author(s):  
H. G. NASS

A 2-yr study of 22 cultivars of spring wheat (Triticum aestivum L.) showed that yield per ear and number of ears per plant reduced yield variance the most in stepwise regression analysis. These two components of yield were negatively correlated. Harvest index, kernels per ear, and yield per ear were associated with plot yield. Kernels per ear and kernel weight were associated with yield per ear. Morphological characters influenced plot yield indirectly in that ear area, flag leaf width, and total photosynthetic area above the flag leaf node were associated with yield per ear. Ears per plant, yield per ear, and harvest index considered together in a selection program should be an effective means of selecting for increased yield.


2020 ◽  
Vol 7 (3) ◽  
pp. 61-71
Author(s):  
V. B. Kovalev ◽  
T. I. Kozlik ◽  
L. V. Protsenko ◽  
A. V. Bober ◽  
B. F. Kormiltsev

Despite the decline in the national hop production, a part of hop products, made of Ukrainian aroma hop, is highly estimated in the international market and exported. Therefore, a relevant prerequisite of ensuring a suffi cient level of competitiveness of domestic hop production is the expansion of its assortment. To satisfy this need the breeders face the task of creating varieties with unique characteristics, which requires searching for new forms and strains of hop with increased content of different biologically active compounds in cones. In this regard national research program aimed to investigate genetic stab ility of hop varieties during multiple planting and storing of explants in in vitro conditions while introducing them into the collection, adapting the composition of Murashige and Skoog culture medium for specifi c varieties is discussed. Studies conducted included the analysis of plants by morphological and variety-specifi c traits, the identifi cation of varieties by biochemical criteria, improvement of hop regenerants using ELISA, molecular-genetic analysis based on PCR (polymerase chain reaction) for identifi cation of hop genotypes and determination of genetic stability, and the improvement of method of microclonal reproduction of hop. As a result of the perennial research of cultivating hop planting material using the Murashige and Skoog complex of nutrients, the foundations of creating and maintaining the in vitro collection of hop varieties were fi rst elaborated in Ukraine which allow for the possibility of decreasing the concentration of nutrients in the culture medium by 50 %, replacing expensive gel-forming preparation for the maintenance of plants in the culture medium - agar-agar, the share of whose cost in the medium composition is up to 70 %, with a cheaper substance - modifi ed starch DDKamod or agroperlite, and reducing the expenses for the maintenance of genetic pool in the in vitro collection. It was determined that the spectra of microsatellite loci of the amplifi ed DNA of the explants, cultivated in vitro, during the study period did not differ from the spectra of plant DNA prior to cloning, which demonstrated DNA stability and allowed cultivating hop varieties in the in vitro culture without any changes in the genome. The composition of media for cultivation and long- term storing of hop varieties in in vitro conditions was selected.


1992 ◽  
Vol 72 (3) ◽  
pp. 671-677 ◽  
Author(s):  
P. Hucl ◽  
B. J. Fowler

Branched-spike spring wheat (Triticum turgidum L.) genotypes are periodically promoted in western Canada as having very high grain yield capacity. These "Miracle" wheats tend to have a low tillering capacity and may require higher plant populations in order to achieve maximum grain yield. This study was conducted to critically evaluate the high-yield claims of a branched-spike wheat (BSW) and to determine whether this cultivar has a higher optimum seeding rate requirement than the spring wheat (Triticum aestivum L.) cultivars Neepawa and HY320. The three cultivars were seeded at rates of 150, 250, 350, 450, and 550 seeds m−2 in each of three experiments: two dryland and one irrigated. Averaged over experiments and seeding rates the BSW yielded 45% less than the conventional cultivars. Significant (P < 0.05) cultivar × experiment cross-overs were detected for spikes m−2, spikelets spike−1, and kernels spike−1. BSW and HY320 switched ranks for spikes m−2, spikelets spike−1 and kernels spike−1 in 1988 and 1989. In 1988, on average, BSW produced 230% as many fertile spikelets as the other cultivars, but 40% fewer spikelets in 1989. Similarly, BSW produced more kernels spike−1 than Neepawa and HY320 in 1988 while the reverse was observed in 1989. The three cultivars responded differently to seeding rate, as indicated by significant (P < 0.01) cultivar × seeding rate interaction for spikelets spike−1 and kernel weight. Neither of these interactions involved significant changes in cultivar rank from one seeding rate to the next. BSW yielded less grain than either Neepawa or HY320, regardless of seeding rate. Attempts to increase the grain yield of a BSW cultivar by manipulating yield components via increased seeding rates were not successful.Key words: Branched-spike, spring wheat, seeding rate, Triticum turgidum L.


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