scholarly journals A Semi-Automatic Method to Create an Affordable Three-Dimensional Printed Splint Using Open-Source and Free Software

Cureus ◽  
2021 ◽  
Author(s):  
Zhujiang Wang ◽  
Adam Dubrowski
Keyword(s):  
Open Source ◽  
Three Dimensional ◽  
Free Software ◽  
Automatic Method

scholarly journals Three-dimensional volumetric rendition of cannon ball pulmonary metastases by the use of 3D Slicer, an open source free software package

2013 ◽  
Vol 2013 (feb04 1) ◽  
pp. bcr2012008248-bcr2012008248 ◽  
Author(s):  
S. Revannasiddaiah ◽  
S. P. Susheela ◽  
N. Madhusudhan ◽  
G. J. Mallarajapatna
Keyword(s):  
Open Source ◽  
Software Package ◽  
Pulmonary Metastases ◽  
Three Dimensional ◽  
Free Software ◽  
3D Slicer

Automatic method for glaucoma diagnosis using a three-dimensional convoluted neural network

2021 ◽  
Vol 438 ◽  
pp. 72-83
Author(s):  
Nonato Rodrigues de Sales Carvalho ◽  
Maria da Conceição Leal Carvalho Rodrigues ◽  
Antonio Oseas de Carvalho Filho ◽  
Mano Joseph Mathew
Keyword(s):  
Neural Network ◽  
Three Dimensional ◽  
Automatic Method ◽  
Glaucoma Diagnosis

scholarly journals Design of a Didactical Activity for the Analysis of Uncertainties in Thermography through the Use of Robust Statistics as Teacher-Oriented Approach

2021 ◽  
Vol 13 (3) ◽  
pp. 402
Author(s):  
Pablo Rodríguez-Gonzálvez ◽  
Manuel Rodríguez-Martín
Keyword(s):  
Open Source ◽  
Robust Statistics ◽  
Three Dimensional ◽  
Learning Material ◽  
Novel Approach ◽  
Learning Programs ◽  
Institutional Learning ◽  
Thermographic Image ◽  
Visualization Techniques ◽  
Free Open Source

The thermography as a methodology to quantitative data acquisition is not usually addressed in the degrees of university programs. The present manuscript proposes a novel approach for the acquisition of advanced competences in engineering courses associated with the use of thermographic images via free/open-source software solutions. This strategy is established from a research based on the statistical and three-dimensional visualization techniques over thermographic imagery to improve the interpretation and comprehension of the different sources of error affecting the measurements and, thereby, the conclusions and analysis arising from them. The novelty is focused on the detection of non-normalities in thermographic images, which is illustrates in the experimental section. Additionally, the specific workflow for the generation of learning material related with this aim is raised for asynchronous and e-learning programs. These virtual materials can be easily deployed in an institutional learning management system, allowing the students to work with the models by means of free/open-source solutions easily. Subsequently, the present approach will give new tools to improve the application of professional techniques, will improve the students’ critical sense to know how to interpret the uncertainties in thermography using a single thermographic image, therefore they will be better prepared to face future challenges with more critical thinking.

scholarly journals PhytoSFDM version 1.0.0: Phytoplankton Size and Functional Diversity Model

2016 ◽  
Vol 9 (11) ◽  
pp. 4071-4085 ◽  
Author(s):  
Esteban Acevedo-Trejos ◽  
Gunnar Brandt ◽  
S. Lan Smith ◽  
Agostino Merico
Keyword(s):  
Open Source ◽  
Open Source Software ◽  
Marine Ecosystem ◽  
Three Dimensional ◽  
Functional Trait ◽  
Global Ocean ◽  
Total Biomass ◽  
Spatially Resolved ◽  
Phytoplankton Communities ◽  
Natural Complexity

Abstract. Biodiversity is one of the key mechanisms that facilitate the adaptive response of planktonic communities to a fluctuating environment. How to allow for such a flexible response in marine ecosystem models is, however, not entirely clear. One particular way is to resolve the natural complexity of phytoplankton communities by explicitly incorporating a large number of species or plankton functional types. Alternatively, models of aggregate community properties focus on macroecological quantities such as total biomass, mean trait, and trait variance (or functional trait diversity), thus reducing the observed natural complexity to a few mathematical expressions. We developed the PhytoSFDM modelling tool, which can resolve species discretely and can capture aggregate community properties. The tool also provides a set of methods for treating diversity under realistic oceanographic settings. This model is coded in Python and is distributed as open-source software. PhytoSFDM is implemented in a zero-dimensional physical scheme and can be applied to any location of the global ocean. We show that aggregate community models reduce computational complexity while preserving relevant macroecological features of phytoplankton communities. Compared to species-explicit models, aggregate models are more manageable in terms of number of equations and have faster computational times. Further developments of this tool should address the caveats associated with the assumptions of aggregate community models and about implementations into spatially resolved physical settings (one-dimensional and three-dimensional). With PhytoSFDM we embrace the idea of promoting open-source software and encourage scientists to build on this modelling tool to further improve our understanding of the role that biodiversity plays in shaping marine ecosystems.

scholarly journals 3-D Printable Polymer Pelletizer Chopper for Fused Granular Fabrication-Based Additive Manufacturing

Inventions ◽  
2018 ◽  
Vol 3 (4) ◽  
pp. 78 ◽  
Author(s):  
Aubrey Woern ◽  
Joshua Pearce
Keyword(s):  
Additive Manufacturing ◽  
Open Source ◽  
Low Cost ◽  
Three Dimensional ◽  
High Tolerance ◽  
Entire Process ◽  
Composite Fabrication ◽  
The Us ◽  
Color Mixing ◽  
Returns On Investment

Although distributed additive manufacturing can provide high returns on investment, the current markup on commercial filament over base polymers limits deployment. These cost barriers can be surmounted by eliminating the entire process of fusing filament by three-dimensional (3-D) printing products directly from polymer granules. Fused granular fabrication (FGF) (or fused particle fabrication (FPF)) is being held back in part by the accessibility of low-cost pelletizers and choppers. An open-source 3-D printable invention disclosed here allows for precisely controlled pelletizing of both single thermopolymers as well as composites for 3-D printing. The system is designed, built, and tested for its ability to provide high-tolerance thermopolymer pellets with a number of sizes capable of being used in an FGF printer. In addition, the chopping pelletizer is tested for its ability to chop multi-materials simultaneously for color mixing and composite fabrication as well as precise fractional measuring back to filament. The US$185 open-source 3-D printable pelletizer chopper system was successfully fabricated and has a 0.5 kg/h throughput with one motor, and 1.0 kg/h throughput with two motors using only 0.24 kWh/kg during the chopping process. Pellets were successfully printed directly via FGF as well as indirectly after being converted into high-tolerance filament in a recyclebot.

scholarly journals Epifluorescence-based three-dimensional traction force microscopy

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Lauren Hazlett ◽  
Alexander K. Landauer ◽  
Mohak Patel ◽  
Hadley A. Witt ◽  
Jin Yang ◽  
...  
Keyword(s):  
Spatial Frequency ◽  
Open Source ◽  
Single Particle ◽  
Three Dimensional ◽  
Traction Force ◽  
High Spatial Frequency ◽  
Epifluorescence Microscopy ◽  
Traction Force Microscopy ◽  
Force Microscopy ◽  
Out Of Plane

Abstract We introduce a novel method to compute three-dimensional (3D) displacements and both in-plane and out-of-plane tractions on nominally planar transparent materials using standard epifluorescence microscopy. Despite the importance of out-of-plane components to fully understanding cell behavior, epifluorescence images are generally not used for 3D traction force microscopy (TFM) experiments due to limitations in spatial resolution and measuring out-of-plane motion. To extend an epifluorescence-based technique to 3D, we employ a topology-based single particle tracking algorithm to reconstruct high spatial-frequency 3D motion fields from densely seeded single-particle layer images. Using an open-source finite element (FE) based solver, we then compute the 3D full-field stress and strain and surface traction fields. We demonstrate this technique by measuring tractions generated by both single human neutrophils and multicellular monolayers of Madin–Darby canine kidney cells, highlighting its acuity in reconstructing both individual and collective cellular tractions. In summary, this represents a new, easily accessible method for calculating fully three-dimensional displacement and 3D surface tractions at high spatial frequency from epifluorescence images. We released and support the complete technique as a free and open-source code package.

scholarly journals In-House, Open-Source 3D-Software-Based, CAD/CAM-Planned Mandibular Reconstructions in 20 Consecutive Free Fibula Flap Cases: An Explorative Cross-Sectional Study With Three-Dimensional Performance Analysis

2021 ◽  
Vol 11 ◽  
Author(s):  
Lucas M. Ritschl ◽  
Paul Kilbertus ◽  
Florian D. Grill ◽  
Matthias Schwarz ◽  
Jochen Weitz ◽  
...  
Keyword(s):  
Open Source ◽  
Dimensional Analysis ◽  
Open Source Software ◽  
Three Dimensional ◽  
Cross Sectional Study ◽  
Sectional Study ◽  
Free Fibula Flap ◽  
Cross Sectional ◽  
Cad Cam ◽  
Free Fibula

BackgroundMandibular reconstruction is conventionally performed freehand, CAD/CAM-assisted, or by using partially adjustable resection aids. CAD/CAM-assisted reconstructions are usually done in cooperation with osteosynthesis manufacturers, which entails additional costs and longer lead time. The purpose of this study is to analyze an in-house, open-source software-based solution for virtual planning.Methods and MaterialsAll consecutive cases between January 2019 and April 2021 that underwent in-house, software-based (Blender) mandibular reconstruction with a free fibula flap (FFF) were included in this cross-sectional study. The pre- and postoperative Digital Imaging and Com munications in Medicine (DICOM) data were converted to standard tessellation language (STL) files. In addition to documenting general information (sex, age, indication for surgery, extent of resection, number of segments, duration of surgery, and ischemia time), conventional measurements and three-dimensional analysis methods (root mean square error [RMSE], mean surface distance [MSD], and Hausdorff distance [HD]) were used.ResultsTwenty consecutive cases were enrolled. Three-dimensional analysis of preoperative and virtually planned neomandibula models was associated with a median RMSE of 1.4 (0.4–7.2), MSD of 0.3 (-0.1–2.9), and HD of 0.7 (0.1–3.1). Three-dimensional comparison of preoperative and postoperative models showed a median RMSE of 2.2 (1.5–11.1), MSD of 0.5 (-0.6–6.1), and HD of 1.5 (1.1–6.5) and the differences were significantly different for RMSE (p < 0.001) and HD (p < 0.001). The difference was not significantly different for MSD (p = 0.554). Three-dimensional analysis of virtual and postoperative models had a median RMSE of 2.3 (1.3–10.7), MSD of -0.1 (-1.0–5.6), and HD of 1.7 (0.1–5.9).ConclusionsOpen-source software-based in-house planning is a feasible, inexpensive, and fast method that enables accurate reconstructions. Additionally, it is excellent for teaching purposes.

scholarly journals Performance Analysis of Static Precise Point Positioning Using Open-Source GAMP

2020 ◽  
Vol 55 (2) ◽  
pp. 41-60
Author(s):  
Jabir Shabbir Malik
Keyword(s):  
Performance Analysis ◽  
Open Source ◽  
Observational Data ◽  
Precise Point Positioning ◽  
Three Dimensional ◽  
Satellite System ◽  
International Gnss Service ◽  
Positioning Accuracy ◽  
Position Accuracy ◽  
Point Positioning

AbstractIn addition to Global Positioning System (GPS) constellation, the number of Global Navigation Satellite System (GLONASS) satellites is increasing; it is now possible to evaluate and analyze the position accuracy with both the GPS and GLONASS constellation. In this article, statistical analysis of static precise point positioning (PPP) using GPS-only, GLONASS-only, and combined GPS/GLONASS modes is evaluated. Observational data of 10 whole days from 10 International GNSS Service (IGS) stations are used for analysis. Position accuracy in east, north, up components, and carrier phase/code residuals is analyzed. Multi-GNSS PPP open-source package is used for the PPP performance analysis. The analysis also provides the GNSS researchers the understanding of the observational data processing algorithm. Calculation statistics reveal that standard deviation (STD) of horizontal component is 3.83, 13.80, and 3.33 cm for GPS-only, GLONASS-only, and combined GPS/GLONASS PPP solutions, respectively. Combined GPS/GLONASS PPP achieves better positioning accuracy in horizontal and three-dimensional (3D) accuracy compared with GPS-only and GLONASS-only PPP solutions. The results of the calculation show that combined GPS/GLONASS PPP improves, on an average, horizontal accuracy by 12.11% and 60.33% and 3D positioning accuracy by 10.39% and 66.78% compared with GPS-only and GLONASS-only solutions, respectively. In addition, the results also demonstrate that GPS-only solutions show an improvement of 54.23% and 62.54% compared with GLONASS-only PPP mode in horizontal and 3D components, respectively. Moreover, residuals of GLONASS ionosphere-free code observations are larger than the GPS code residuals. However, phase residuals of GPS and GLONASS phase observations are of the same magnitude.

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