Total Synthesis of 6-Deoxydihydrokalafungin, a Key Biosynthetic Precursor of Actinorhodin, and Its Epimer

In this article, we report the total synthesis of 6-deoxydihydrokalafungin (DDHK), a key biosynthetic intermediate of a dimeric benzoisochromanequinone antibiotic, actinorhodin (ACT), and its epimer, epi-DDHK. Tricyclic hemiacetal with 3-siloxyethyl group was subjected to Et3SiH reduction to establish the 1,3-cis stereochemistry in the benzoisochromane, and a subsequent oxidation/deprotection sequence then afforded epi-DDHK. A bicyclic acetal was subjected to AlH3 reduction to deliver the desired 1,3-trans isomer in an approximately 3:1 ratio, which was subjected to a similar sequence to that used for the 1,3-cis isomer that successfully afforded DDHK. A semisynthetic approach from (S)-DNPA, an isolable biosynthetic precursor of ACT, was also examined to afford DDHK and its epimer, which are identical to the synthetic products.

Methyl-Cyclohexane Methanol (MCHM) Isomer-Dependent Binding on Amorphous Carbon Surfaces

In January 2014, over 10,000 gallons of methyl-cyclohexane methanol (MCHM) leaked into the Elk River in West Virginia, in a chemical spill incident that contaminated a large portion of the state’s water supply and left over 300,000 residents without clean water for many days and weeks. Initial efforts to remove MCHM at the treatment plant centered on the use of granulated activated carbon (GAC), which removed some of the chemical from the water, but MCHM levels were not lowered to a “non-detect” status until well after the chemical plume had moved downstream of the intake. Months later, MCHM was again detected at the outflow (but not the inflow) at the water treatment facility, necessitating the full and costly replacement of all GAC in the facility. The purpose of this study is to investigate the hypothesis that preferential absorbance of one of the two MCHM isomers, coupled with seasonal variations in water temperature, explain this contrary observation. Calculated intermolecular potentials between ovalene (a large planar polycyclic aromatic hydrocarbon) and the MCHM isomers were compared to physisorption potentials of MCHM onto an amorphous carbon model. While a molecular mechanics (MM) force field predicts no difference in the average interaction potentials between the cis- and trans-MCHM with the planar ovalene structure, MM predicts that the trans isomer binds stronger than the cis isomer to the amorphous carbon surface. Semi-empirical and density functional theory also predict stronger binding of trans-MCHM on both the planar and amorphous surfaces. The differences in the isomer binding strengths on amorphous carbon imply preferential absorbance of the trans isomer onto activated charcoal filter media. Considering seasonal water temperatures, simple Arrhenius kinetics arguments based on these predicted binding energies help explain the environmental observations of MCHM leeching from the GAC filters months after the spill. Overall, this work shows the important implications that can arise from detailed interfacial chemistry investigations.

Mechanistic Studies of Pd-Catalyzed Fluorination of Cyclic Vinyl Triflates: Evidence for in situ Ligand Modification

<div><div><div><p>Pd-catalyzed nucleophilic fluorination reactions are important methods for the synthesis of fluoroarenes and fluoroalkenes. However, these reactions can generate a mixture of regioisomeric products that are often difficult to separate. While investigating the Pd- catalyzed fluorination of cyclic vinyl triflates, we observed that the addition of a substoichiometric quantity of TESCF3 significantly improves both the efficiency and the regioselectivity of the fluorination process. Herein, we report a combined experimental and computational study on the mechanism of this transformation focused on the role of TESCF3. We found that in the absence of additives such as TESCF3, the transmetalation step produces predominantly the thermodynamically more stable trans isomer of the key LPd(vinyl)F complex (L = biaryl monophosphine ligand). This intermediate, rather than undergoing reductive elimination, preferentially reacts through an intramolecular β-deprotonation to form a Pd-cyclohexyne intermediate. This undesired reactivity is responsible for the low efficiency (11% yield) and poor regioselectivity (1.8:1) of the catalytic reaction. When TESCF3 is added to the reaction mixture, the cis-LPd(vinyl)F complex is instead formed, through a pathway involving an unusual dearomatization of the ligand by nucleophilic attack from a trifluoromethyl anion (CF3–). In contrast to the trans isomer, this cis-LPd(vinyl)F complex readily undergoes reductive elimination to provide the vinyl fluoride product with desired regioselectivity, without the generation of Pd-cyclohexyne intermediates.</p></div></div></div>

Mechanistic Studies of Pd-Catalyzed Fluorination of Cyclic Vinyl Triflates: Evidence for in situ Ligand Modification

<div><div><div><p>Pd-catalyzed nucleophilic fluorination reactions are important methods for the synthesis of fluoroarenes and fluoroalkenes. However, these reactions can generate a mixture of regioisomeric products that are often difficult to separate. While investigating the Pd- catalyzed fluorination of cyclic vinyl triflates, we observed that the addition of a substoichiometric quantity of TESCF3 significantly improves both the efficiency and the regioselectivity of the fluorination process. Herein, we report a combined experimental and computational study on the mechanism of this transformation focused on the role of TESCF3. We found that in the absence of additives such as TESCF3, the transmetalation step produces predominantly the thermodynamically more stable trans isomer of the key LPd(vinyl)F complex (L = biaryl monophosphine ligand). This intermediate, rather than undergoing reductive elimination, preferentially reacts through an intramolecular β-deprotonation to form a Pd-cyclohexyne intermediate. This undesired reactivity is responsible for the low efficiency (11% yield) and poor regioselectivity (1.8:1) of the catalytic reaction. When TESCF3 is added to the reaction mixture, the cis-LPd(vinyl)F complex is instead formed, through a pathway involving an unusual dearomatization of the ligand by nucleophilic attack from a trifluoromethyl anion (CF3–). In contrast to the trans isomer, this cis-LPd(vinyl)F complex readily undergoes reductive elimination to provide the vinyl fluoride product with desired regioselectivity, without the generation of Pd-cyclohexyne intermediates.</p></div></div></div>

Kinetic Separation of cis-and trans-Limonene Epoxide: Reaction of Diastereomeric Mixture of Limonene Oxides with Secondary Amine and Carbamate

A simple kinetic separation of (1:1) diastereomeric mixture of limonene oxides was used to purify cis-and trans-diastereomers of (R)-(+)-limonene oxide. The epoxide ring of trans-isomer was selectively opened by (R)-N-methyl-(α-methyl-benzyl)amine. This secondary nucleophilic amine left cis-limonene oxide largely unreacted and was obtained up to 90% yield. In a diverse way, (R)-N-(α-methylbenzyl) ethyl carbamate, selectively catalyze hydrolysis of cis-limonene oxide to 1,2-limonene diol leaving trans-limonene oxide largely unreacted. The unreacted trans-limonene oxide was recovered in up to 75% yield. HPLC and NMR analyses were used to demonstrate that the isolation of cis-and trans-diastereomers of (R)-(+)-limonene oxide has shown that > 98% were pure. As a result, depending on the realization of the secondary amine or carbamate in the presence of water, either cis-or trans-limonene oxide may be obtained in high diastereomeric purity.

Evaluation of Intestinal Absorption of Dietary Halocynthiaxanthin, a Carotenoid from the Sea Squirt Halocynthia roretzi

Halocynthiaxanthin is an acetylenic carotenoid mainly found in Halocynthia roretzi. To date, several bioactivities of halocynthiaxanthin have been reported, but its mechanism of digestion and absorption in mammals has not been studied yet. In this study, we evaluated the intestinal absorption of halocynthiaxanthin in mice. The halocynthiaxanthin-rich fraction was prepared from the tunicate Halocynthia roretzi. Mice were orally administered the fraction at a dose of 5 mg/kg body weight. The halocynthiaxanthin levels in the plasma, liver, and small intestine, were quantified using HPLC-PDA, 1, 3, 6, and 9 h after ingestion. The halocynthiaxanthin-rich fraction mainly consisted of the all-trans form and a small amount of cis forms. These three isomers were detected in the plasma of mice 3 h after ingestion. Time-course changes after the ingestion of this fraction were found, with cis isomers being more abundant than the all-trans isomer in the mouse plasma and liver. In the small intestine, however, the all-trans isomer was primarily detected. The possibility that cis isomers might be absorbed rapidly from the small intestine cannot be denied, but our results suggest that dietary all-trans-halocynthiaxanthin might be isomerized to the cis isomer after intestinal absorption.

Synthesis and properties of a photochromic perinaphthothioindigo conjugated with two porphyrins

In this study, we synthesized a new porphyrin-perinaphthothioindigo composite in which two porphyrins are connected to a perinaphthothioindigo dye through ethynyl linkages. The UV-vis absorption spectra of the composite showed an absorption peak originating from the trans-isomer at around 730 nm. Upon photoirradiation at 760 nm, the intensity of this absorption decreased with increasing absorption of the cis-isomer around 500 nm. The HOMO–LUMO absorption of the cis-isomer is blue-shifted by ˜230 nm compared to that of trans-isomer due to lack of [Formula: see text] conjugation. The shift by 230 nm is 100 nm larger than that observed for the monoporphyrin-substituted compound, indicating the expansion of [Formula: see text] conjugation by the additional porphyrin.

Light-gated nano-porous polymersomes from stereoisomer-directed self-assemblies

Capsules with holes in the walls exist in natural systems like virus capsids, and in biomimetic systems like immune-stimulating complexes vaccines and liposomes of phospholipids/surfactants mixtures. Structuring pores into stable membrane and controlling their opening are extremely useful for applications that require nano-pores as channels for material exchange and transportation. Polymersomes, which are stable and robust vesicles made of amphiphilic block copolymer, are good candidates for drug carriers or micro/nanoreactors. Engineering structure-inherent and light-gated nano-porous polymersomes is especially appealing, but still unexplored. Here we present these polymersomes made from a polymer including a tetraphenylethene (TPE) in its center. TPE is an emblematic fluorogen with aggregation-induced emission, which possesses two stereoisomers sensitive to photoisomerization. Trans-isomer of the polymer forms classical vesicles, cis-isomer forms cylindrical micelles, while trans/cis mixtures construct perforated vesicles with nano-pores. Under UV light, the classical polymersomes of trans-isomer can be perforated by its cis-counterpart generated from the photoisomerization.