cis isomer
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Crystals ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 1560
Author(s):  
Yaming Wu ◽  
Yuhai Liu ◽  
Jianxiang Chen ◽  
Runmiao Yang

A new amphiphilic surfactant (C4-Azo-C5-HDA) was formed by liquid crystals (LCs) based on azobenzene, whose structures were characterized by 1H-NMR spectroscopy. The reversible hydrogelation upon changes in temperature and light exposure was also studied. Under the irradiation of UV light, the trans-isomer of C4-Azo-C5-HDA rapidly photoisomerized to the cis-isomer, resulting in rapid disruption of the gel. The thermotropic liquid crystal behavior of the gelator was investigated via Differential Scanning Calorimetry (DSC) and Polarizing Optical Microscopy (POM). The biocompatibility experiment of multi-stimulus response of the liquid crystal provides a potential driving force for the development of biomaterials.


2021 ◽  
Author(s):  
Shaaban Elroby ◽  
Bashair Abdullah Banaser ◽  
Saadullah G Aziz ◽  
Abdesslem Jedidi ◽  
Walid I Hassan ◽  
...  

Abstract The present study presents a thorough theoretical analysis of the electronic structure and conformational preference of the Schiff’s base ligand N,N-bis(2-hydroxybenzilidene)-2,4,6-trimethyl benzene-1,3-diamine (H2L) and its metal complexes with Zn2+, Cu2+ and Ag+ ions. The study aims to investigate the behavior of H2L and the binuclear Zn2+ complex (1), as fluorescent probes for the detection of metal ions (Zn2+, Cu2+ and Ag+) using Density Functional Theory (DFT) and Time Dependent Density Functional Theory (TDDFT). The six conformers of the H2L ligand were optimized using B3LYP/6-311++G** level of theory, while the L-2-metal complexes were optimized by applying B3LYP functional with LANL2DZ/6-311++G** mixed basis set. The gas-phase and solvated Enol-cis isomer (E-cis) was found to be the most stable species. The absorption spectra of E-cis isomer and its metal complexes were simulated using B3LYP, CAM-B3LYP, M06-2X and ωB97X functionals with a 6-311++G** basis set for C, O, N and H atoms and LANL2DZ basis set for the metal ions (Zn2+, Cu2+ and Ag+). The computational results of B3LYP functional were in excellent agreement with the experimental ones. Hence, it has been adopted for performing the emission calculations. The results indicated that, the metal complex (1) can act as a fluorescent chemosensor, for the detection of Ag+ and Cu2+ ions through the mechanism of the Intermolecular Charge Transfer (ICT) and as a molecular switch “On-Off-On” via the replacement of Cu2+ by Ag+ ions, as proved experimentally.


Molecules ◽  
2021 ◽  
Vol 26 (21) ◽  
pp. 6397
Author(s):  
Takuya Kumamoto ◽  
Mika Kainuma ◽  
Azusa Takahashi ◽  
Yoshika Matsuo ◽  
Kazuaki Katakawa ◽  
...  

In this article, we report the total synthesis of 6-deoxydihydrokalafungin (DDHK), a key biosynthetic intermediate of a dimeric benzoisochromanequinone antibiotic, actinorhodin (ACT), and its epimer, epi-DDHK. Tricyclic hemiacetal with 3-siloxyethyl group was subjected to Et3SiH reduction to establish the 1,3-cis stereochemistry in the benzoisochromane, and a subsequent oxidation/deprotection sequence then afforded epi-DDHK. A bicyclic acetal was subjected to AlH3 reduction to deliver the desired 1,3-trans isomer in an approximately 3:1 ratio, which was subjected to a similar sequence to that used for the 1,3-cis isomer that successfully afforded DDHK. A semisynthetic approach from (S)-DNPA, an isolable biosynthetic precursor of ACT, was also examined to afford DDHK and its epimer, which are identical to the synthetic products.


Crystals ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 1179
Author(s):  
Ahmed Boshaala ◽  
Abrahem F. Abrahem ◽  
Abdulla Ali Almughery ◽  
Nabil Al-Zaqri ◽  
Abdelkader Zarrouk ◽  
...  

The reaction of bidentate N-S-thione-Schiff base, (E)-benzyl 2-(1-(4-chlorophenyl)- ethylidene)hydrazinecarbodithioate, with Cu(NO3)2·3H2O produced a cis-Cu(II) complex. The molecular structure was confirmed and characterized by CHN-EA, FAB-MS, IR, and UV-Vis analyses. The XRD supported cis-isomer of the bis anionic bidentate N (azomethine) and S (thiol) ligand coordination mode in tetrahedrally distorted square planar, rarely reported in the literature. The results of the XRD-bond lengths were in perfect agreement with the density functional theory (DFT) calculation. DFT-calculated angles around the Cu(II) center displayed slightly less distortion around the metal center from those of XRD. Additionally, the thermal stability of the complex was evaluated via thermal gravimetric analysis (TGA). Two-dimensional fingerprint (2D-FP), Hirshfeld surface analysis (HSA), and molecular electrostatic potential (MEP) support the XRD-packing results with the existence of the H⸱⸱⸱Cl and CH⸱⸱⸱π bonds as the main interactions in the crystal lattice of the desired complex.


2021 ◽  
Vol 26 (4) ◽  
pp. 215-224
Author(s):  
Tatas Hardo Panintingjati Brotosudarmo ◽  
Edi Setiyono ◽  
Koichiro Awai ◽  
Delianis Pringgenies

Currently, there are only six species in the genus Seonamhaeicola, i.e., Seonamhaeicola aphaedonensis, S. algicola, S. marinus, S. acroporae, S. maritimus, and S. sediminis. These bacteria have typical yellow or orange color. Among the identified strains, only S. marinus that had been reported to have a yellow polyene flexirubin pigment. However, the presence of carotenoid pigments has not been reported in this genus. Recently, we successfully isolated a new strain, S. algicola strain CC1, bacterium that was found in association with a red seaweed, Halymenia sp., collected from the coast of South Malang, Indonesia. The strain was grown well in the Zobell marine agar 2216E producing yellowish pigments. According to the 16S rRNA sequencing analysis and BLAST search, the strain is closely related to S. algicola strain Gy8, with 99.78% identity. The pigment composition was separated and analyzed by a high-performance liquid chromatography with tandem mass spectrometry detection (HPLC-MS/MS) and the strain was found to produce zeaxanthin as the major component, which appeared at a retention time (tR) of 28.89 min, showing a typical mass spectrum with a molecular ion at m/z 568.5 [M]+ and four product ions at m/z 261.4 [M−307]+, 476.6 [M−92]+, 429.3 [M−139]+, and 536.5 [M− 32]+. Other carotenoids, including zeaxanthin cis isomers, β-cryptoxanthin, β-carotene cis isomer, and β-carotene, are as minor components. The novel and noteworthy finding of this report is the identification of a Seonamhaeicola species that produces carotenoids and can be used as a source of zeaxanthin.


2021 ◽  
Vol 0 (0) ◽  
Author(s):  
Robert Christie ◽  
Adrian Abel

Abstract Perylenes and perinones are separate groups of pigments categorized within the carbonyl chemical class. The two pigment groups show similarities, for example, in their chemical structural features and, to an extent, in their technical and application properties as high-performance organic pigments. Perylenes constitute a series of firmly established high-performance pigments, offering red and violet colors, and also extending to black. Synthetically, they are derived from perylene-1,4,5,8-tetracarboxylic acid. The perylenes tend to be quite expensive pigments, but their high levels of fastness properties mean that they are suitable for highly demanding applications. In particular, they offer very high heat stability. Two perinone pigments are used commercially. In their synthesis from naphthalene-1,4,5,8-tetracarboxylic acid, they are formed as mixtures of the two isomers, which can be separated. The trans isomer, CI Pigment Orange 43, is a highly important commercial pigment, especially for plastics, while the cis isomer, CI Pigment Red 194, is bordeaux in color and is of much lesser importance. The perinone, CI Pigment Orange 43, provides a brilliant orange color and has very good fastness properties. Its commercial manufacture involves a challenging multistage procedure and consequently it is one of the most expensive organic pigments on the market.


2021 ◽  
Author(s):  
Kim Kuntze ◽  
Jani Viljakka ◽  
Evgenii Titov ◽  
Zafar Ahmed ◽  
Elina Kalenius ◽  
...  

Abstract Thermally stable photoswitches that are driven with low-energy light are rare, yet crucial for extending the applicability of photoresponsive molecules and materials towards, e.g., living systems. Combined ortho-fluorination and -amination couples high visible-light absorptivity of o-aminoazobenzenes with the extraordinary bistability of o-fluoroazobenzenes. Herein, we report a library of easily accessible o-aminofluoroazobenzenes and establish structure–property relationships regarding spectral qualities, visible light isomerization efficiency and thermal stability of the cis-isomer with respect to the degree of o-substitution and choice of amino substituent. We rationalize the experimental results with quantum chemical calculations, revealing the nature of low-lying excited states and providing insight into thermal isomerization. The synthesized azobenzenes absorb at up to 600 nm and their thermal cis-lifetimes range from milliseconds to months. The most unique example can be driven from trans to cis with any wavelength from UV up to 595 nm, while still exhibiting a thermal cis-lifetime of 81 days.


2021 ◽  
Vol 6 (22) ◽  
pp. 5406-5410
Author(s):  
M. Sambaiah ◽  
PradeepKumar Thota ◽  
Shrinivas S. Kottawar ◽  
Satyanarayana Yennam ◽  
K. Shiva Kumar ◽  
...  

Marine Drugs ◽  
2020 ◽  
Vol 18 (12) ◽  
pp. 588
Author(s):  
Chiaki Ikeda ◽  
Yuki Manabe ◽  
Nami Tomonaga ◽  
Tatsuya Wada ◽  
Takashi Maoka ◽  
...  

Halocynthiaxanthin is an acetylenic carotenoid mainly found in Halocynthia roretzi. To date, several bioactivities of halocynthiaxanthin have been reported, but its mechanism of digestion and absorption in mammals has not been studied yet. In this study, we evaluated the intestinal absorption of halocynthiaxanthin in mice. The halocynthiaxanthin-rich fraction was prepared from the tunicate Halocynthia roretzi. Mice were orally administered the fraction at a dose of 5 mg/kg body weight. The halocynthiaxanthin levels in the plasma, liver, and small intestine, were quantified using HPLC-PDA, 1, 3, 6, and 9 h after ingestion. The halocynthiaxanthin-rich fraction mainly consisted of the all-trans form and a small amount of cis forms. These three isomers were detected in the plasma of mice 3 h after ingestion. Time-course changes after the ingestion of this fraction were found, with cis isomers being more abundant than the all-trans isomer in the mouse plasma and liver. In the small intestine, however, the all-trans isomer was primarily detected. The possibility that cis isomers might be absorbed rapidly from the small intestine cannot be denied, but our results suggest that dietary all-trans-halocynthiaxanthin might be isomerized to the cis isomer after intestinal absorption.


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