Observations of linear aggregation behavior in rotifers (Brachionus calyciflorus)

Linear aggregation is present in some animals, such as the coordinated movement of ants and the migration of caterpillars and spinylobsters, but none has been reported on rotifers. The rotifers were collected and clone cultured in the laboratory at 25 ± 1°C, under natural light (light intensity ~130 lx, L:D = 14:10). The culture medium(pH = 7.3) was formulated as described by Suga et al., and rotifers were fed on the micro algae Scenedesmus obliquus grown in HB-4 medium to the exponential growth stage. When density was high (150 individuals ml-1), the behavior of rotifers was observed using a stereo microscope (Motic ES-18TZLED). In this paper, linear aggregation in Brachionus calyciflorus was found for the first time, and experiments were carried out to verify the correlation between linear aggregation and culture density of B. calyciflorus. With the increase of density, the number of aggregations increase, the number of individuals in the aggregation increased, and the maintenance time of the aggregation was also increased. Therefore, we speculate that the formation of aggregates is related to density and may be a behavioral signal of density increase, which may transmit information between density increase and formation of dormant eggs.

Refining the evolutionary time machine: an assessment of whole genome amplification using single historical Daphnia eggs

Whole genome sequencing is instrumental for the study of genome variation in natural populations, delivering important knowledge on genomic modifications and potential targets of natural selection at the population level. Large dormant eggbanks of aquatic invertebrates such as the keystone herbivore Daphnia, a microcrustacean widespread in freshwater ecosystems, provide detailed sedimentary archives to study genomic processes over centuries. To overcome the problem of limited DNA amounts in single Daphnia dormant eggs, we developed an optimised workflow for whole genome amplification (WGA), yielding sufficient amounts of DNA for downstream whole genome sequencing of individual historical eggs, including polyploid lineages. We compare two WGA kits, applied to recently produced Daphnia magna dormant eggs from laboratory cultures, and to historical dormant eggs of Daphnia pulicaria collected from Arctic lake sediment between 10y and 300y old. Resulting genome coverage breadth in most samples was ~70%, including those from >100y old isolates. Sequence read distribution was highly correlated among samples amplified with the same kit, but less correlated between kits. Despite this, a high percentage of genomic positions with SNPs in one or more samples (maximum of 74% between kits, and 97% within kits) were recovered at a depth required for genotyping. As a by-product of sequencing we obtained 100% coverage of the mitochondrial genomes even from the oldest isolates (~300y). The mtDNA provides an additional source for evolutionary studies of these populations. We provide an optimised workflow for WGA followed by whole genome sequencing including steps to minimise exogenous DNA.

Zooplankton associated with phytotelms and treefrogs in a neotropical forest

ABSTRACT Assumptions about the distribution of zooplankton communities in various ecosystems are often limited by lack of data on dispersal mechanisms. Many studies on frog-mediated passive dispersal have been developed in bromeliads, but they usually focus on ostracods and annelids. We investigated the potential for external phoresy of zooplankton (rotifers, cladocerans, copepods) by treefrogs in bromeliad phytotelms. Our hypotheses are that (1) zooplankton composition on frogs’ skin and in phytotelm tanks is similar, and (2) frogs with larger body size carry more propagules of these invertebrates. We filtered phytotelm water (10 to 150 mL) using plankton net (45 µm), and fixed invertebrates with 4% formalin. Frogs were actively collected in and around bromeliads (up to ~1.5 m radius) and then washed with distilled water. Fourteen species of rotifers and three of crustaceans were registered in phytotelm water and frog bodies. We captured 17 frogs with a snout-vent length (SVL) ranging from 2 to 5 cm and belonging to five species: Pristimantis ramagii (Boulenger, 1888), Dendropsophus decipiens (A. Lutz, 1925), Scinax auratus (Wied-Neuwied,1821), S. pachycrus (Miranda-Ribeiro, 1937) and S. x-signatus (Spix, 1824). Among them, 12 (70.59%) had propagules adhered to their bodies, of which the majority (ten individuals) had active zooplankton forms, while only two had dormant eggs. Ten rotifer and two microcrustacean species were recorded adhered to frogs. The zooplankton composition differed between phytotelms and anuran skin, and frog body size does not explain the number of propagules carried, refuting both hypotheses. However, evidence of dispersal was found due to the high number of propagules adhered to anurans. Our study provides evidence that frogs may be potential dispersers of dormant and active forms of zooplankton in bromeliads, through external phoresy.

Growing Old: Aging in Crustacea

This chapter gives an overview on aging and longevity in the Crustacea. Crustaceans have life spans that range from a few weeks to several decades, depending on taxonomic affiliation, size, lifestyle, and environment. Some short-lived crustaceans can produce dormant eggs that remain viable for decades and centuries. Longevity differences of populations between habitats and geographical regions can be explained by life history theory. Crustaceans possess a variety of highly effective antiaging mechanisms, including molting, adult stem cell activity, removal of cellular waste products, detoxification of environmental toxicants, and immune response against pathogens. The longer-lived, indeterminately growing species show negligible senescence until old age and would thus provide valuable models for biogerontology.

The effect of lake sediment on the hatching success of Daphnia ephippial eggs

<p>A large proportion of lake-<em>Daphnia</em> ephippia which are shed by females in the water column sink to the bottom, where they form an assemblage of dormant stages known as an egg bank. Although the quantity of zooplankton eggs in such assemblages may exceed tens of thousands per square meter, the annual hatch from this bank is usually extremely low (from zero to a few dozens animals per square meter per year). This low-hatching phenomenon may be caused by isolation from hatching stimuli by water or sediment layers, a mechanical barrier formed by sediment that does not allow hatchlings to reach the water, or by a bet-hedging strategy of the resting eggs. The aim of our study was to determine the extent to which coverage by lake sediment may affect the hatching of <em>Daphnia </em>dormant eggs. The ephippia of lake-<em>Daphnia</em> (<em>longispina</em> species complex), covered by sterilized lake sediment of different thicknesses (0, 0.25, 0.5, 1, 2 and 4 cm; 4 replicates per treatment), were incubated for 8 weeks in lab controlled conditions. The results indicate that even the thinnest tested layer (0.25 cm) may completely inhibit hatching of ephippial eggs. A few <em>Daphnia</em> neonates were observed in two (of five) sediment treatments, while dozens of animals hatched in the control one. In the second experiment we determined that the sediment sterilization process did not affect the hatching proportion of ephippial eggs (when compared to the treatment with unsterilized sediments). We hypothesize that the observed inhibition of <em>Daphnia</em> hatching in the main experiment, which may cause a serious problem for Cladoceran populations in lakes where no sediment mixing occurs, may be caused by low light intensity, anoxic conditions or a physical barrier created by the sediment.</p>

Oxygenation of anoxic sediments triggers hatching of zooplankton eggs

Many coastal marine systems have extensive areas with anoxic sediments and it is not well known how these conditions affect the benthic–pelagic coupling. Zooplankton lay their eggs in the pelagic zone, and some sink and lie dormant in the sediment, before hatched zooplankton return to the water column. In this study, we investigated how oxygenation of long-term anoxic sediments affects the hatching frequency of dormant zooplankton eggs. Anoxic sediments from the brackish Baltic Sea were sampled and incubated for 26 days with constant aeration whereby, the sediment surface and the overlying water were turned oxic. Newly hatched rotifers and copepod nauplii (juveniles) were observed after 5 and 8 days, respectively. Approximately 1.5 × 10 5 nauplii m −2 emerged from sediment turned oxic compared with 0.02 × 10 5 m −2 from controls maintained anoxic. This study demonstrated that re-oxygenation of anoxic sediments activated a large pool of buried zooplankton eggs, strengthening the benthic–pelagic coupling of the system. Modelling of the studied anoxic zone suggested that a substantial part of the pelagic copepod population can derive from hatching of dormant eggs. We suggest that this process should be included in future studies to understand population dynamics and carbon flows in marine pelagic systems.