Genetic Variability of Palm Lethal Decline Phytoplasmas in the Caribbean Basin and Florida, U.S.A., Based on a Multilocus Analysis

Palm lethal decline phytoplasmas are an important group of plant pathogens that cause death in a variety of palm species throughout the Caribbean basin and the southeastern United States. The 16SrIV-D phytoplasma was introduced to the state of Florida, United States; it has since caused severe economic losses to the green industries of Florida and is threating natural ecosystems because of its ability to infect the native palm Sabal palmetto. In this study, the genetic variability of the 16SrIV-D phytoplasma was assessed over a 10-year period to determine if multiple introductions had occurred or if natural mutations were occurring. Furthermore, the genetic variability of the palm lethal decline phytoplasma group (16SrIV) was assessed with a multiple locus analysis using the 16S ribosomal RNA gene, the 16S-23S intergenic spacer region, and secA and groEL genes. Overall, no variability of the 16SrIV-D phytoplasma was documented in Florida over a 10-year period. The multilocus analysis showed support for three distinct species of the phytoplasma in the Caribbean basin that infect palms and further support that the 16SrIV-C from Tanzania is not closely related. Furthermore, 16SrIV-B and 16SrIV-D were found to be the same phytoplasma based on 100% identity between the two based on intergenic spacer region, secA, and groEL analysis. This study represents the first robust, multilocus analysis of palm-infecting phytoplasmas from the Caribbean and sheds light on the phylogeny and evolution of the group.

Observation and modeling of the historic “Godzilla” African dust intrusion into the Caribbean Basin and the southern US in June 2020

This study characterizes a massive African dust intrusion into the Caribbean Basin and southern US in June 2020, which is nicknamed the “Godzilla” dust plume, using a comprehensive set of satellite and ground-based observations (including MODIS, CALIOP, SEVIRI, AERONET, and EPA Air Quality network) and the NASA GEOS global aerosol transport model. The MODIS data record registered this massive dust intrusion event as the most intense episode over the past 2 decades. During this event, the aerosol optical depth (AOD) observed by AERONET and MODIS peaked at 3.5 off the coast of West Africa and 1.8 in the Caribbean Basin. CALIOP observations show that the top of the dust plume reached altitudes of 6–8 km in West Africa and descended to about 4 km altitude over the Caribbean Basin and 2 km over the US Gulf of Mexico coast. The dust intrusion event degraded the air quality in Puerto Rico to a hazardous level, with maximum daily PM10 concentration of 453 µg m−3 recorded on 23 June. The dust intrusion into the US raised the PM2.5 concentration on 27 June to a level exceeding the EPA air quality standard in about 40 % of the stations in the southern US. Satellite observations reveal that dust emissions from convection-generated haboobs and other sources in West Africa were large albeit not extreme on a daily basis. However, the anomalous strength and northern shift of the North Atlantic Subtropical High (NASH) together with the Azores low formed a closed circulation pattern that allowed for accumulation of the dust near the African coast for about 4 d. When the NASH was weakened and wandered back to the south, the dust outflow region was dominated by a strong African easterly jet that rapidly transported the accumulated dust from the coastal region toward the Caribbean Basin, resulting in the record-breaking African dust intrusion. In comparison to satellite observations, the GEOS model reproduced the MODIS observed tracks of the meandering dust plume well as it was carried by the wind systems. However, the model substantially underestimated dust emissions from haboobs and did not lift up enough dust to the middle troposphere for ensuing long-range transport. Consequently, the model largely missed the satellite-observed elevated dust plume along the cross-ocean track and underestimated the dust intrusion into the Caribbean Basin by a factor of more than 4. Modeling improvements need to focus on developing more realistic representations of moist convection, haboobs, and the vertical transport of dust.

The American Palm Cixiid, Haplaxius crudus

The American palm cixiid, Haplaxius crudus, is a common species of insect that belongs to the order Hemiptera, family Cixiidae. It is widespread and abundant in the state of Florida, but also occurs as far north as South Carolina and as far west as Texas. Furthermore, it is common throughout the Caribbean basin. This insect feeds on a wide variety of palm species as adults while the immature stages feed on a wide variety of grass species. This species is of high economic concern due to its ability to transmit the lethal yellowing (LY) phytoplasma (Howard and Thomas 1980) and is also the putative vector of lethal bronzing (LB) in Florida. Major revision of Howard, Forrest. 2007. “American Palm Cixiid, Myndus Crudus Van Duzee (Insecta: Hemiptera: Auchenorrhyncha: Fulgoroidea: Cixiidae)”. EDIS 2007 (10). https://journals.flvc.org/edis/article/view/116586. Revised 2015.

Weed-infecting viruses in a tropical agroecosystem present different threats to crops and evolutionary histories

In the Caribbean Basin, malvaceous weeds commonly show striking golden/yellow mosaic symptoms. Leaf samples from Malachra sp. and Abutilon sp. plants with these symptoms were collected in Hispaniola from 2014 to 2020. PCR tests with degenerate primers revealed that all samples were infected with a bipartite begomovirus, and sequence analyses showed that Malachra sp. plants were infected with tobacco leaf curl Cuba virus (TbLCuCV), whereas the Abutilon sp. plants were infected with a new bipartite begomovirus, tentatively named Abutilon golden yellow mosaic virus (AbGYMV). Phylogenetic analyses showed that TbLCuCV and AbGYMV are distinct but closely related species, which are most closely related to bipartite begomoviruses infecting weeds in the Caribbean Basin. Infectious cloned DNA-A and DNA-B components were used to fulfilled Koch’s postulates for these diseases of Malachra sp. and Abutilon sp. In host range studies, TbLCuCV also induced severe symptoms in Nicotiana benthamiana, tobacco and common bean plants; whereas AbGYMV induced few or no symptoms in plants of these species. Pseudorecombinants generated with the infectious clones of these viruses were highly infectious and induced severe symptoms in N. benthamiana and Malachra sp., and both viruses coinfected Malachra sp., and possibly facilitating virus evolution via recombination and pseudorecombination. Together, our results suggest that TbLCuCV primarily infects Malachra sp. in the Caribbean Basin, and occasionally spills over to infect and cause disease in crops; whereas AbGYMV is well-adapted to an Abutilon sp. in the Dominican Republic and has not been reported infecting crops.

A record-breaking trans-Atlantic African dust plume associated with atmospheric circulation extremes in June 2020

High concentrations of dust can affect climate and human health, yet our understanding of extreme dust events is still limited. A record-breaking trans-Atlantic African dust plume occurred during June 14–28, 2020, greatly degrading air quality over large areas of the Caribbean Basin and U.S. Daily PM2.5 concentrations exceeded 50 μg m−3 in several Gulf States, while the air quality index reached unhealthy levels for sensitive groups in more than 11 States. The magnitude and duration of aerosol optical depth over the tropical North Atlantic Ocean were the greatest ever observed during summer over the past 18 years based on satellite retrievals. This extreme trans-Atlantic dust event is associated with both enhanced dust emissions over western North Africa and atmospheric circulation extremes that favor long-range dust transport. An exceptionally strong African easterly jet and associated wave activities export African dust across the Atlantic toward the Caribbean in the middle to lower troposphere, while a westward extension of the North Atlantic subtropical high and a greatly intensified Caribbean low-level jet further transport the descended, shallower dust plume from the Caribbean Basin into the U.S. Over western North Africa, increased dust emissions are associated with strongly enhanced surface winds over dust source regions and reduced vegetation coverage in the western Sahel. While there are large uncertainties associated with assessing future trends in African dust emissions, model-projected atmospheric circulation changes in a warmer future generally favor increased long-range transport of African dust to the Caribbean Basin and the U.S.

Gorgonians Are Foundation Species on Sponge-Dominated Mesophotic Coral Reefs in the Caribbean

Foundation species (FS) regulate ecological processes within communities often facilitating biodiversity and habitat complexity. Typically FS are dominant structure-forming taxa; but less dominant taxa having disproportionate ecological impacts to the community can also be FS. Mesophotic coral ecosystems (MCEs) are deep coral reef (∼30–150 m) communities, often dominated by emergent sponges in the Caribbean Basin. Despite the potential competitive advantage of sponges on MCEs, gorgonians are also common constituents of these reefs. Data from the Bahamas demonstrate increased biodiversity and densities of sponges on mesophotic reefs with gorgonians relative to reefs without these species. Drawing upon fifteen years of field surveys at five sites in the Caribbean Basin we assessed in situ interactions between gorgonians and sponges to quantify outcomes consistent with competition (i.e., tissue necrosis and overgrowth). Gorgonians were effective competitors against a variety of sponges, and two allelochemicals produced by Ellisella elongata were mechanistically important in interactions with Agelas clathrodes. We also examined invertebrate recruitment patterns near gorgonians to assess their role in facilitating MCE biodiversity. Our results indicate that live gorgonians, Antillogorgia bipinnata and E. elongata, facilitate biodiverse recruitment into MCEs, indicating that this process is governed by more than passive hydrodynamics. Collectively, these data indicate that these gorgonians exhibit both positive and negative ecological interactions (i.e., facilitation and competition, respectively) with sponges, and other taxa. Thus, these gorgonians are FS of MCE communities within the Caribbean Basin that display several traits contributing to the ecological structure of these understudied communities.