speciation model
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2021 ◽  
Author(s):  
◽  
Nellie J. Olsen

<p>In this thesis, 30°C stibnite solubility experiments, ambient temperature X-ray absorption spectroscopic measurements of antimony in solution, and high temperature (70 to 400°C) stibnite solubility experiments were carried out in order to determine the aqueous antimony species present in equilibrium with stibnite in hydrosulfide solutions from pH = 3.5 to 12 and reduced sulfur concentrations from 0.001 to 0.1 mol kg⁻¹. Both ambient and elevated temperature solubility studies were conducted using a flow-through apparatus containing a column of stibnite grains though which solutions were pumped. Above 100°C, solubility experiments were conducted at slightly above saturated water vapour pressure to pressures of 300 bar.  At 30°C, the stibnite solubility curve was best reproduced by a scheme of five species: Sb₂S₄²⁻, HSb₂S₄⁻, H₂Sb₂S₅²⁻, H₃SbS₂O, and Sb(OH)₃. At higher temperatures (≥ 70 °C), stibnite solubility at the conditions of the experiments was due to the following four species: Sb₂S₄²⁻, HSb₂S₄⁻, H₃SbS₂O, and Sb(OH)₃. Equilibrium constants were determined for the following five heterogeneous solubility reactions for the temperature ranges listed:  [Please consult the thesis for details.]  Stibnite solubility was independent of pressure at ≤ 350°C. At ~ 400°C, the solubility of stibnite was strongly dependent on pressure and decreased from Sbtotal = 0.015 to 0.0003 mol kg⁻¹ (~2000 to 40 ppm) with a pressure decrease from 300 to 160 bars.  The Sb K-edge X-ray absorption spectroscopic (XAS) measurements of antimony in alkaline (pH = 10. 9 to 12) hydrosulfide solutions gave average first shell coordination environments that were consistent with the speciation model derived from solubility experiments for strongly alkaline solutions (i.e., Sb₂S₄²⁻ and Sb(OH)₃). XAS data enable the elimination of a speciation model involving only monomeric antimony complexes at strongly alkaline pH.  Antimony speciation in near neutral to strongly alkaline pH’s is dominated by dimeric antimony-sulfide complexes at 30°C and sulfide concentrations > 0.001 mol kg⁻¹. With increasing temperature, antimony speciation becomes increasingly dominated by Sb(OH)₃. For hydrothermal solutions with sulfide concentrations between 0.0001 and 0.01 mol kg⁻¹, antimony-sulfide complexes are predominant at < 100°C, whereas antimonous acid, Sb(OH)₃, is the main aqueous species at contributing to stibnite solubility at > 200°C with the speciation in the intervening temperature range being dependent on the pH and sulfide concentration of the solution. For higher sulfide concentrations (i.e., ~ 0.1 mol kg⁻¹), HSb₂S₄⁻ and Sb₂S₄²⁻ control stibnite solubility to higher temperatures.</p>


2021 ◽  
Author(s):  
◽  
Nellie J. Olsen

<p>In this thesis, 30°C stibnite solubility experiments, ambient temperature X-ray absorption spectroscopic measurements of antimony in solution, and high temperature (70 to 400°C) stibnite solubility experiments were carried out in order to determine the aqueous antimony species present in equilibrium with stibnite in hydrosulfide solutions from pH = 3.5 to 12 and reduced sulfur concentrations from 0.001 to 0.1 mol kg⁻¹. Both ambient and elevated temperature solubility studies were conducted using a flow-through apparatus containing a column of stibnite grains though which solutions were pumped. Above 100°C, solubility experiments were conducted at slightly above saturated water vapour pressure to pressures of 300 bar.  At 30°C, the stibnite solubility curve was best reproduced by a scheme of five species: Sb₂S₄²⁻, HSb₂S₄⁻, H₂Sb₂S₅²⁻, H₃SbS₂O, and Sb(OH)₃. At higher temperatures (≥ 70 °C), stibnite solubility at the conditions of the experiments was due to the following four species: Sb₂S₄²⁻, HSb₂S₄⁻, H₃SbS₂O, and Sb(OH)₃. Equilibrium constants were determined for the following five heterogeneous solubility reactions for the temperature ranges listed:  [Please consult the thesis for details.]  Stibnite solubility was independent of pressure at ≤ 350°C. At ~ 400°C, the solubility of stibnite was strongly dependent on pressure and decreased from Sbtotal = 0.015 to 0.0003 mol kg⁻¹ (~2000 to 40 ppm) with a pressure decrease from 300 to 160 bars.  The Sb K-edge X-ray absorption spectroscopic (XAS) measurements of antimony in alkaline (pH = 10. 9 to 12) hydrosulfide solutions gave average first shell coordination environments that were consistent with the speciation model derived from solubility experiments for strongly alkaline solutions (i.e., Sb₂S₄²⁻ and Sb(OH)₃). XAS data enable the elimination of a speciation model involving only monomeric antimony complexes at strongly alkaline pH.  Antimony speciation in near neutral to strongly alkaline pH’s is dominated by dimeric antimony-sulfide complexes at 30°C and sulfide concentrations > 0.001 mol kg⁻¹. With increasing temperature, antimony speciation becomes increasingly dominated by Sb(OH)₃. For hydrothermal solutions with sulfide concentrations between 0.0001 and 0.01 mol kg⁻¹, antimony-sulfide complexes are predominant at < 100°C, whereas antimonous acid, Sb(OH)₃, is the main aqueous species at contributing to stibnite solubility at > 200°C with the speciation in the intervening temperature range being dependent on the pH and sulfide concentration of the solution. For higher sulfide concentrations (i.e., ~ 0.1 mol kg⁻¹), HSb₂S₄⁻ and Sb₂S₄²⁻ control stibnite solubility to higher temperatures.</p>


Diversity ◽  
2021 ◽  
Vol 13 (9) ◽  
pp. 434
Author(s):  
Gary Voelker ◽  
Guinevere O. U. Wogan ◽  
Jerry W. Huntley ◽  
Rauri C. K. Bowie

Southern Africa is remarkably rich in avian species diversity; however, the evolutionary and biogeographic mechanisms responsible for that diversity are, in general, poorly understood, and this is particularly true with respect to the many species that are endemic or near-endemic to the region. Here, we used mtDNA to assess genetic structure in three southern African bird species to determine whether each was genetically panmictic, or whether there was standing genetic variation upon which abiotic factors (e.g., climate, biome boundaries, geographic features) could have acted to drive lineage diversification. Haplotype diversity was partitioned into two (two species) or three (one species) distinct haplotype clusters that did not reflect biogeographic or biome partitioning; instead, haplotype clusters overlapped in central South Africa. Population and demographic analyses, along with ecological niche modeling and Bayesian Skyline Plots, indicated that each of the three species were likely isolated in refugia during Pleistocene climatic perturbations, with subsequent expansions from refugia resulting in present-day overlapping distributions. Collectively, our analyses suggest that an ephemeral speciation model is operating in southern Africa, driven by the dynamic climatic oscillations that characterize the region. At least some of the regional endemic bird species (e.g., White-eyes, Zosterops spp.) may be the result of sufficiently long periods in refugia as opposed to the distinct but ephemeral clusters recovered within our three focal species.


Biomolecules ◽  
2021 ◽  
Vol 11 (9) ◽  
pp. 1312
Author(s):  
Antonio Gigliuto ◽  
Rosalia Maria Cigala ◽  
Anna Irto ◽  
Maria Rosa Felice ◽  
Alberto Pettignano ◽  
...  

The interactions of dopamine [2-(3,4-Dihydroxyphenyl)ethylamine, (Dop-)] with methylmercury(II) (CH3Hg+), magnesium(II), calcium(II), and tin(II) were studied in NaCl(aq) at different ionic strengths and temperatures. Different speciation models were obtained, mainly characterized by mononuclear species. Only for Sn2+ we observed the formation of binuclear complexes (M2L2 and M2LOH (charge omitted for simplicity); M = Sn2+, L = Dop−). For CH3Hg+, the speciation model reported the ternary MLCl (M = CH3Hg+) complex. The dependence on the ionic strength of complex formation constants was modeled by using both an extended Debye–Hückel equation that included the Van’t Hoff term for the calculation of enthalpy change values of the formation and the Specific Ion Interaction Theory (SIT). The results highlighted that, in general, the entropy is the driving force of the process. The sequestering ability of dopamine towards the investigated cations was evaluated using the calculation of pL0.5 parameter. The sequestering ability trend resulted to be: Sn2+ > CH3Hg+ > Ca2+ > Mg2+. For example, at I = 0.15 mol dm−3, T = 298.15 K and pH = 7.4, pL0.5 = 3.46, 2.63, 1.15, and 2.27 for Sn2+, CH3Hg+, Ca2+ and Mg2+ (pH = 9.5 for Mg2+), respectively. For the Ca2+/Dop- system, the precipitates collected at the end of the potentiometric titrations were analyzed by thermogravimetry (TGA). The thermogravimetric calculations highlighted the formation of solid with stoichiometry dependent on the different metal:ligand ratios and concentrations of the starting solutions.


Author(s):  
Zhiliang Chen ◽  
Peng Zhang ◽  
Kevin G. Brown ◽  
Janelle L. Branch ◽  
Hans A. van der Sloot ◽  
...  

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Pengcheng Wang ◽  
Chiafen Yeh ◽  
Jiang Chang ◽  
Hongyan Yao ◽  
Yiqiang Fu ◽  
...  

AbstractBackgroundUnderstanding how species diversify is a long-standing question in biology. The allopatric speciation model is a classic hypothesis to explain the speciation process. This model supposes that there is no gene flow during the divergence process of geographically isolated populations. On the contrary, the speciation with gene flow model supposes that gene flow does occur during the speciation process. Whether allopatric species have gene flow during the speciation process is still an open question.MethodsWe used the genetic information from 31 loci of 24 Chinese Bamboo Partridges (Bambusicola thoracicus) and 23 Taiwan Bamboo Partridges (B. sonorivox) to infer the gene flow model of the two species, using the approximate Bayesian computation (ABC) model. The ecological niche model was used to infer the paleo-distribution during the glacial period. We also tested whether the two species had a conserved ecological niche by means of a background similarity test.ResultsThe genetic data suggested that the post-divergence gene flow between the two species was terminated before the mid-Pleistocene. Furthermore, our ecological niche modeling suggested that their ecological niches were highly conserved, and that they shared an overlapping potential distribution range in the last glacial maximum.ConclusionsThe allopatric speciation model cannot explain the speciation process of the two Bamboo Partridges. The results of this study supported a scenario in which speciation with gene flow occurring between the allopatric species and have contributed to our understanding of the speciation process.


Antioxidants ◽  
2021 ◽  
Vol 10 (5) ◽  
pp. 656
Author(s):  
Enrico Prenesti ◽  
Silvia Berto ◽  
Fabio Gosmaro ◽  
Marco Bagnati ◽  
Giorgio Bellomo

(1) Background: Much effort has been expended to investigate the antioxidant capacity of human plasma, attempting to clarify the roles of both metabolic and food substances in determining defenses against oxidative stress. The relationship between the total antioxidant capacity (TAC) and the concentrations of redox-active biomolecules in the human plasma of healthy and cardiopathic individuals was investigated in the present study to develop a chemical speciation model. (2) Methods: Plasma was collected from 85 blood donors and from 25 cardiovascular surgery patients. The TAC was measured using the CUPRAC-BCS (CUPric Reducing Antioxidant Capacity — Bathocuproinedisulfonic acid) method. Biomolecule concentrations were determined via visible spectrophotometry or HPLC/RP techniques. The relationship between the TAC and the concentrations was defined by applying a multiple regression analysis. The significance of the variables was first tested, and chemical models were proposed for the two datasets. The model equation is TAC=∑iβi∙[Ai] , where βi and [Ai] are the electronic exchange and the molar concentrations of the ith antioxidant component, respectively. (3) Results: The major contributions to the TAC, ~80%, come from endogenous compounds in both healthy and cardiopathic individuals, whereas the contributions from exogenous compounds were different between the two datasets. In particular, γ-tocopherol showed a different role in the chemical models developed for the two groups.


Author(s):  
D N Kulagin ◽  
A A Lunina ◽  
U V Simakova ◽  
A L Vereshchaka

Abstract Evolutionary mechanisms driving the diversification of pelagic animals remain poorly understood, partly due to the high levels of gene flow in the open ocean. We use molecular phylogenetics, morphological, and phylogeographic approaches to test the allopatric speciation model in respect to the Atlantic krill genus Nematoscelis. Based on our observations, we hypothesize that diversification in genus Nematoscelis may occur through three progressing stages: (i) populations separated geographically and divergence occurred in the mitochondrial COI gene only (Nematoscelis megalops, one clade of Nematoscelis tenella), (ii) morphology diverged (clades of Nematoscelis microps and Nematoscelis atlantica), and (iii) the nuclear H3 gene diverged (clades of N. tenella). Our results confirm allopatric expectations and the dispersal-limiting speciation model. We propose that the primary driver of diversification is geographic isolation coupled with hydrology-linked gene barriers at ∼14–22°N (new) and ∼30°S. The second driver preventing hybridization of diverged populations is linked to external morphology, i.e. enlarged photophores and chitin saddles on the pleon of males, which facilitate sexual selection by female choice. Same-male forms, even belonging to different species, rarely co-occur, which makes the selection effective and not biased. Our results implicate a significant role of non-copulatory characters in Nematoscelis speciation.


Zootaxa ◽  
2021 ◽  
Vol 4908 (1) ◽  
pp. 66-84
Author(s):  
JAY R. JR. STAUFFER ◽  
ROGER BILLS ◽  
PAUL H. SKELTON

The present study describes Serranochromis alvum n. sp., Serranochromis swartzi n. sp., Serranochromis cuanza n. sp., and Serranochromis cacuchi n. sp. from Angolan tributaries of the Cuanza and Okavango systems in Angola. The presence of four or five scale rows between the posterior margin of the orbit and the ascending arm of the preoperculum, the presence of widely set unicuspid teeth on the jaws, widely separated gill rakers, and anal fins with egg ocelli place these four species in Serranochromis. The Serranochromis described herein are distinguishable based on a combination of morphological and meristic characters, as well as pigmentation patterns. The interorbital width (14.3–15.9 % HL) of S. alvum is narrower than that of S. swartzi (17.6–19.8), S. cuanza (16.3–18.0), and S. cacuchi (20.0–21.7). Moreover, the interorbital width of S. cacuchi is greater than the other three described species. Serranochromis swartzi has a smaller preorbital depth (16.2–18.9 % HL) and snout length (29.6–31.9 % HL) than Serranochromis cuanza (PD 19.1–22.2, SNL 35.2–39.6 % HL). Serranochromis alvum is known only from the type locality at Cuito-Cuanavale at the junction of the Cuito and Cuanavale rivers, tributary to the Okavango River in Angola. Serranochromis swartzi is known only from the type locality in the Cuanza River, Angola. Serranochromis cuanza is restricted to the Cuanza River, below Capanda Dam, Angola, while S. cacuchi is known only from the Cacuchi River, a tributary of the Cuchi-Cubango River in Angola. The limited distribution of all four species and the absence of many congeners suggest, that in addition to previous studies that invoked a lacustrine speciation model, vicariance through drainage isolation seems to have played an important role in driving speciation in this group. The minimum polygon clusters that are formed when the first principal components of the meristic data are plotted against the second sheared principal components of the morphometric data show separation of the four new species. 


2021 ◽  
Author(s):  
Fabrice Gaillard ◽  
Malavergne Malavergne ◽  
Ali Bouhifd
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