31-Phosphorus Magnetic Resonance Spectroscopy in Evaluation of Glioma and Metastases in 3T MRI

Background: 31-Phosphorus magnetic resonance spectroscopy (31-P MRS) has excellent potential for clinical neurological practice because of its noninvasive in-vivo assessment of cellular energy metabolism and the indirect evaluation of the phospholipid composition of the cell membrane, intracellular pH, and intracellular Mg2+ concentration. Purpose: The aim of this study was to evaluate the metabolic characteristics of glioma and metastases using 31-P MRS and assess utility to differentiate both. Study Type: Prospective study. Population: Fifteen consecutive patients with brain tumor. Field Strength/Sequence: Three-tesla magnetic resonance imaging/three-dimensional MRS imaging sequence. Statistical Tests: Unpaired sample t-test, and one-way analysis of variance with Tukey's post-hoc test. Results: Significantly decreased values of phosphomonoesters/inorganic phosphate (PME/Pi) in the tumor group (1.22 ± 0.72) compared with controls (2.28 ± 1.44) with a p-value of 0.041 were observed. There is a significant decrease in phosphocreatine (PCr)/Pi values (energy demand) in the tumor group (2.76 ± 0.73) compared with controls (4.13 ± 1.75) with a p-value of 0.050. Significant increase in Pi/adenosine triphosphate (ATP) was noted in tumor group (0.28 ± 0.09) compared with controls (0.22 ± 0.08) with p-value 0.049. Among tumor group, PME/PCr values were significantly decreased in gliomas (0.35 ± 0.17) than metastasis (0.58 ± 0.23) compared with controls with a p-value of 0.047. A significant decrease in PME/ATP was noted in gliomas (0.25 ± 0.12) than metastasis (0.41 ± 0.14) compared with controls with a p-value of 0.034. The tumor group exhibits alkaline pH (7.12 ± 0.10) compared with the normal parenchyma (7.04 ± 0.06) with a significant p-value of 0.025. Glioma and metastasis could not be differentiated with pH. However, the perilesional edema of glioma shows alkaline pH (7.09 ± 0.06) and metastasis shows acidic pH (7.02 ± 0.05) with a significant p-value of 0.030. Conclusion: Our study provides new insight into the cellular constituents and pH of gliomas and metastases and results were significant in differentiation between these two. However, due to the additional high expense, it is available as a research tool in very few institutions in India.

Extremophiles and Their Application in Bioremediation

A microorganism dwelling in severe environmental conditions is termed an extremophile. These unfavorable environmental conditions include high salinity, toxin compounds, heavy metals, unfavorable temperature, and extremely acidic and alkaline pH. Microorganisms belonging to prokaryotes include true bacteria and archaea bacteria which prevail in harsh environments. In recent years, extremophilic, basically, archaea bacteria have been reported for their immense potential application in the bioremediation process. Bioremediation is a technique that utilizes microorganisms for the decomposition of organic and inorganic pollutants; anthropogenic activities are the basic cause of soil pollution, water pollution, and air pollution globally. Extremophiles are capable of producing enzymes that are thermolabile and can function normally even in extreme conditions. These enzymes and proteins can be utilized in the bioremediation process under extreme pH, heavy metal stress, and unfavorable temperature conditions. In this chapter, the role of extremophiles in bioremediation is discussed.

Alkalophiles

Alkalophiles are a class of extremophiles capable of survival in alkaline (pH roughly 8.5–11) environments, growing optimally around a pH of 10. At such high pH, the normal cellular functions are detrimentally affected for mesophilic organisms. The alkalophiles successfully manage stability of DNA, plasma membrane, and function of cytosolic enzymes, as well as other unfavorable physiological changes at such an elevated pH. A recent development in NextGen sequencing technology facilitates identifying uncultivable organisms amongst the extreme environments. In recent years, distribution of alkalophiles was reported from Soda Lake, marine environments, saline deserts, and natural thermal vents to natural water bodies. Although alkalophiles were first reported in 1889, their enzymatic and industrial applications still make them an interesting area of research. This chapter provides basic information on environmental distribution, taxonomy, physiology, bioenergetics, and survival mechanism and enzymes produced by alkalophilic organisms.

Fish muscle hydrolysate obtained using largemouth bass Micropterus salmoides digestive enzymes improves largemouth bass performance in its larval stages

The present study utilized digestives tracts from adult largemouth bass (LMB) to hydrolyze Bighead carp muscle and obtain an optimal profile of muscle protein hydrolysates that would be easily assimilated within the primitive digestive tract of larval LMB. Specifically, muscle protein source was digested for the larva using the fully developed digestive system of the same species. The objectives of this study were: 1) to develop an optimal in vitro methodology for carp muscle hydrolysis using LMB endogenous digestive enzymes, and 2) to evaluate the effect of dietary inclusion of the carp muscle protein hydrolysate on LMB growth, survival, occurrence of skeletal deformities, and whole-body free amino acid composition. The study found that the in vitro hydrolysis method using carp intact muscle and LMB digestive tracts incubated at both acid and alkaline pH (to mimic digestive process of LMB) yielded a wide range of low molecular weight fractions (peptides), as opposed to the non-hydrolyzed muscle protein or muscle treated only with acid pH or alkaline pH without enzymes from LMB digestive tracts, which were comprised of large molecular weight fractions (polypeptides above 150 kDa). Overall, the dietary inclusion of the carp muscle hydrolysate improved growth performance of larval LMB in terms of final average weight, weight gain, DGC, SGR, and body length after 21 days of feeding compared to fish that received the diet based on non-hydrolyzed carp muscle. The study also found that hydrolysate-based feed significantly reduced skeletal deformities. The positive growth performance presented by fish in the hydrolysate-fed group possibly resulted from matching the specific requirements of the larvae with respect to their digestive organ development, levels of digestive enzymes present in the gut, and nutritional requirements.

Effects of Varying Rates of Nitrogen and Biochar pH on NH3 Emissions and Agronomic Performance of Chinese Cabbage (Brassica rapa ssp. pekinensis)

NH3 emitted into the atmosphere undergoes intricate chemical reactions to form fine particulate matter PM2.5. Nitrogen fertilizers are one of the major sources of gaseous ammonia. Recently, research into using biochar to lessen NH3 emissions from agricultural land has taken center stage and several studies have been executed in that regard. However, biochar’s capacity to reduce emissions of gaseous NH3 from applied nitrogen fertilizers is affected by both soil and biochar properties. While the effects of soil properties on NH3 volatilizations have been widely studied, the data concerning the effects of biochar properties on NH3 volatilizations from the soil are still scanty. It is against this backdrop that this study examined the effects of biochar pH on emissions of NH3 from the soil amended with varying quantities of nitrogen, as well as the impact on the growth and productivity of Chinese cabbage. To achieve the study objectives, acidic (pH 5.7), neutral (pH 6.7) and alkaline (pH 11.0) biochars were used and each was added to the soil at a rate of 1% (w/w). Nitrogen fertilizers were applied at three rates of 160, 320, 640 kg ha−1. In comparison with the control, the acidic, neutral and alkaline biochar amendments reduced NH3 emissions by up to 18%, 20% and 15%, respectively. However, only neutral biochar produced higher Chinese cabbage yields than the urea-only amendment and the Chinese cabbage yields increased with the increasing rates of nitrogen applied. Combined applications of neutral biochar and 640 kg/ha of nitrogen are recommended for optimal cabbage yields and low NH3 emissions.

Cyanobacterial Diversity and Physicochemical Characteristics of Thermal Springs in The Kütahya Province of Turkey

Thermal springs are very difficult environments for organisms due to the high temperature, and physicochemical parameters. Cyanobacteria, which are photosynthetic prokaryotes, are best adapted to these environments. Kütahya is an important thermal area in Turkey. The aim of the study was to determine the cyanobacterial flora with a morphologic and ecologic approach in the 11 thermal. The physicochemical properties of the thermal springs in Kütahya province were measured. The thermal springs are alkaline (pH6) with an average temperature of 52°C. As a result, 54 cyanobacteria taxa were identified. Oscillatoriales were the predominant order in terms of taxa diversity (24 taxa) and biomass size. Statistical analyses were conducted to reveal the physicochemical properties of the thermal springs and the distribution of cyanobacteria in detail. According to these analyses, the thermal springs were classified into two main groups with a Piper. As a result of the RDA analysis under CANOCO 5.0, the total variation was 55.45455, and the first two axes explained a total of 57.43% of the variance. There was a significant difference (P0.001) in the comparison of the physicochemical parameters including pH, EC, TDS, and temperature values of the thermal springs in the Kruskal Wallis tests. Bangladesh J. Plant Taxon. 28(2): 413-428, 2021 (December)

Distribution characteristics, source identification, and risk assessment of heavy metals in surface sediments of the salt lakes in the Ordos Plateau, China

Salt lakes have a significant effect on the regional climate, environment, and ecology in semi-arid regions characterized by lower rainfall and high evaporation. However, under the stresses of global change and human disturbance, anthropogenic pollution is the main factor threatening the lake ecological environment. Surface sediment samples collected from four salt lakes in the Ordos Plateau were used to investigate the salinity, concentration, pollution status, potential sources of heavy metals, and influencing factors. The surface sediments of Beida Pond and Gouchi Pond were weakly alkaline (pH < 9) owing to Na2SO4, whereas those of Chaigannaoer and Hongjiannao were strongly alkaline (pH > 9) owing to Na2CO3. The concentration range of Cr, Ni, Cu, Zn, As, Cd, and Pb in the sediment samples collected from the salt lake in the Ordos followed the order of Cr > Zn > Ni > Pb > Cu > As > Cd. The Cr values were higher in Chagannaoer and Hongjiannao, but the Ni, Cu, and Zn values were higher in Beida Pond and Gouchi Pond. The geoaccumulation index (Igeo) and enrichment factor (EF) consistently indicated that Cr posed the greatest potential ecological risk and that Ni, Cu, and Zn pollution was more severe in Beida Pond and Gouchi Pond than in Chagannaoer or Hongjiannao. However, Er and RI indicated these heavy metals were a low risk to the environment. Risk assessment code (RAC) revealed that Pb and Cr exhibited no mobility and had low potential bioavailability risk, although Zn, Ni, and As were categorized as medium risk. Cu had the highest mobility and high risk. Principal component analysis for Beida Pond and Gouchi Pond revealed that the source of Ni, Cu, Zn, Cd, and Pb might be associated with water - soluble elements in aqueous migration, and the source of Cr, Pb, and As might be lithospheric minerals carried by dust storms. Ni, Cu, Zn, Cd, Cr, and Pb in Chagannaoer and Hongjiannao may be derived from surface runoff, and chemicals from these sources may eventually accumulate in sediments. Pearson’s correlation analysis indicated that pH was the main environmental factor controlling the distribution of heavy metals in Chagannaoer and Hongjiannao.

Oat Protein Concentrates with Improved Solubility Produced by an Enzyme-Aided Ultrafiltration Extraction Method

The aim of this study was to develop an extraction method to produce highly functional oat protein concentrates. We investigated the possibility of combining enzyme-aided slightly alkaline (pH 8.0) extraction with ultrafiltration and subsequent diafiltration for concentration of the extracted oat proteins. A further aim was to study how the deamidation of oat proteins with protein-glutaminase (PG) improves the solubility of proteins as a function of the following parameters: pH (6.0–9.0), enzyme dosage (4–20 U/g protein), and incubation time (1–4 h) with response surface methodology (RSM). Furthermore, we investigated selected functional properties, such as heat-induced gelation and solubility, of the oat protein concentrates. The chosen parameters for the enzymatic deamidation pre-treatment process by PG were as follows: pH 8.0, dosage 11.0 U/g protein, and an incubation time of 4 h (1 h at native pH and 3 h at pH 8.0). Two oat protein concentrates were produced, non-deamidated and ultrafiltered, and deamidated and ultrafiltered, with protein concentrations of 45.0 and 52.4%, respectively. The solubility of both oat protein concentrates was significantly improved at neutral and slightly alkaline pH compared to the solubility of proteins extracted from the starting material. Additionally, both oat protein concentrates produced equally strong heat-induced gel-like structures at a protein concentration of 10%.

Response of Biological Gold Nanoparticles to Different pH Values: Is It Possible to Prepare Both Negatively and Positively Charged Nanoparticles?

The mycelium-free supernatant (MFS) of a five-day-old culture medium of Fusarium oxysporum was used to synthesize gold nanoparticles (AuNPs). The experimental design of the study was to answer the question: can this production process of AuNPs be controllable like classical chemical or physical approaches? The process of producing AuNPs from 1 mM tetrachloroauric (III) acid trihydrate in MFS was monitored visually by color change at different pH values and quantified spectroscopically. The produced AuNPs were analyzed by transmission electron microscopy, scanning electron microscopy, and energy-dispersive X-ray spectroscopy. The presence of capping agents was confirmed by Fourier transform infrared spectroscopy (FTIR). Two AuNP samples with acidic and alkaline pH were selected and adjusted with the pH gradient and analyzed. Finally, the size and zeta potential of all samples were determined. The results confirmed the presence of the proteins as capping agents on the surface of the AuNPs and confirmed the production of AuNPs at all pH values. All AuNP samples exhibited negative zeta potential, and this potential was higher at natural to alkaline pH values. The size distribution analysis showed that the size of AuNPs produced at alkaline pH was smaller than that at acidic pH. Since all samples had negative charge, we suspect that there were other molecules besides proteins that acted as capping agents on the surface of the AuNPs. We conclude that although the biological method of nanoparticle production is safe, green, and inexpensive, the ability to manipulate the nanoparticles to obtain both positive and negative charges is limited, curtailing their application in the medical field.