shewanella frigidimarina
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2020 ◽  
Vol 85 (3) ◽  
pp. 728-738
Author(s):  
Mohammad Mojarrad ◽  
Takahisa Tajima ◽  
Akiko Hida ◽  
Junichi Kato

ABSTRACT 3-Hydroxypropionic acid (3-HP) and 1,3-propanediol (1,3-PDO) have tremendous potential markets in many industries. This study evaluated the simultaneous biosynthesis of the 2 compounds using the new psychrophile-based simple biocatalyst (PSCat) reaction system. The PSCat method is based on the expression of glycerol dehydratase, 1,3-propanediol dehydrogenase, and aldehyde dehydrogenase from Klebsiella pneumoniae in Shewanella livingstonensis Ac10 and Shewanella frigidimarina DSM 12253, individually. Heat treatment at 45 °C for 15 min deactivated the intracellular metabolic flux, and the production process was started after adding substrate, cofactor, and coenzyme. In the solo production process after 1 h, the maximum production of 3-HP was 62.0 m m. For 1,3-PDO, the maximum production was 25.0 m m. In the simultaneous production process, productivity was boosted, and the production of 3-HP and 1,3-PDO increased by 13.5 and 4.9 m m, respectively. Hence, the feasibility of the individual production and the simultaneous biosynthesis system were verified in the new PSCat approach.


FEBS Journal ◽  
2018 ◽  
Vol 285 (8) ◽  
pp. 1511-1527 ◽  
Author(s):  
Tyler D.R. Vance ◽  
Laurie A. Graham ◽  
Peter L. Davies

Author(s):  
Inês B. Trindade ◽  
Bruno M. Fonseca ◽  
Pedro M. Matias ◽  
Ricardo O. Louro ◽  
Elin Moe

Siderophore-binding proteins (SIPs) perform a key role in iron acquisition in multiple organisms. In the genome of the marine bacteriumShewanella frigidimarinaNCIMB 400, the gene tagged as SFRI_RS12295 encodes a protein from this family. Here, the cloning, expression, purification and crystallization of this protein are reported, together with its preliminary X-ray crystallographic analysis to 1.35 Å resolution. The SIP crystals belonged to the monoclinic space groupP21, with unit-cell parametersa= 48.04,b= 78.31,c= 67.71 Å, α = 90, β = 99.94, γ = 90°, and are predicted to contain two molecules per asymmetric unit. Structure determination by molecular replacement and the use of previously determined ∼2 Å resolution SIP structures with ∼30% sequence identity as templates are ongoing.


2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Gisela Parmeciano Di Noto ◽  
Susana C. Vázquez ◽  
Walter P. MacCormack ◽  
Andrés Iriarte ◽  
Cecilia Quiroga

We present the draft genome of Shewanella frigidimarina Ag06-30, a marine bacterium from King George Island, Antarctica, which encodes the carbapenemase SFP-1. The assembly contains 4,799,218 bp (G+C content 41.24%). This strain harbors several mobile genetic elements that provide insight into lateral gene transfer and bacterial plasticity and evolution.


2016 ◽  
Vol 42 (1) ◽  
pp. 73-80 ◽  
Author(s):  
V. A. Khomenko ◽  
G. N. Likhatskaya ◽  
L. A. Romanenko ◽  
O. Yu. Portnyagina ◽  
T. F. Solovyeva ◽  
...  

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