Shewanella oneidensis MR-1 as a bacterial platform for electro-biotechnology

The genus Shewanella comprises over 70 species of heterotrophic bacteria with versatile respiratory capacities. Some of these bacteria are known to be pathogens of fishes and animals, while many are non-pathogens considered to play important roles in the global carbon cycle. A representative strain is Shewanella oneidensis MR-1 that has been intensively studied for its ability to respire diverse electron acceptors, such as oxygen, nitrate, sulfur compounds, metals, and organics. In addition, studies have been focused on its ability as an electrochemically active bacterium that is capable of discharging electrons to and receiving electrons from electrodes in bioelectrochemical systems (BESs) for balancing intracellular redox states. This ability is expected to be applied to electro-fermentation (EF) for producing value-added chemicals that conventional fermentation technologies are difficult to produce efficiently. Researchers are also attempting to utilize its electrochemical ability for controlling gene expression, for which electro-genetics (EG) has been coined. Here we review fundamental knowledge on this bacterium and discuss future directions of studies on its applications to electro-biotechnology (EB).

High-resolution electrochemistry of the extracellular electron transfer of Escherichia coli

Escherichia coli is one of the most important model bacteria in microorganism research and is broadly encountered in nature. In the present study, a wild-type E. coli strain K-12 was used for electrochemical investigations. Differential pulse voltammetry showed five pairs of redox peaks both for K-12 cells and the supernatant with potentials (anodic/cathodic) at −0.450/−0.378, −0.125/−0.105, −0.075/−0.055, +0.192/+0.264, and +0.300/+0.414 V (vs. Ag/AgCl), respectively. Chronoamperometry indicates that K-12 cells can produce immediate current by addition of glucose. The current production from K-12 can be 8-fold enhanced by 10.0 μM exogenetic vitamin K3, but addition of 10.0 μM riboflavin did not enhance the current production. Medium replacement experiments show that 50 % of the K-12 biofilm current was produced via direct extracellular electron transfer pathways. The study provides new insight in the voltammetry of strain K-12 and confirms that E. coli is an electrochemically active bacterium. E. coli has the potential to serve as a model bacterium for studying microbial extracellular electron transfer mechanisms.

Comparative Analysis of Blood Clot, Plasma Rich in Growth Factors and Platelet-Rich Fibrin Resistance to Bacteria-Induced Fibrinolysis

Alveolar osteitis (AO) is a common, painful postoperative complication after tooth extraction. Fibrinolytic activity in the extraction socket is one etiological factor. Platelet concentrates are used to prevent and treat AO. The aim of this study was to find out whether the positive effect of platelet concentrates can be related to resistance to bacteria-induced fibrinolysis. Blood from 45 human volunteers was used to prepare four media: blood clot medium as control group; PRF and PRGF first fraction (PRGF I) and PRGF second fraction (PRGF II) as study groups. Additionally, collected blood was used for blood plasma preparation on which evaluation of initial value of d-dimer concentration was performed. A solution of five different microbes (Staphylococcus aureus, Streptococcus pyogenes, Streptococcus pneumonia, Bacillus cereus, and Candida albicans) was adjusted to 0.5 McFarland (1 × 108 CFU/mL) and then diluted to 0.25 McFarland (0.5 × 108 CFU/mL). The d-dimer concentration was evaluated after one and three hours of bacteria exposure. The resistance to fibrinolysis was not statistically distinguished among any media groups at any time. S. pneumoniae was statistically active in PRF after three hours. C. albicans was statistically active in PRGF II after one hour and in PRF between the first and third hour and after three hours. S. aureus and B. cereus were statistically active in PRGF II after three hours. S. pyogenes was statistically active after one hour, between the first and third hour, and after the third hour in all groups. S. pyogenes was the most active bacterium. Different blood formulations were not distinguishable based on resistance to bacteria-induced fibrinolysis. Low fibrinolytic properties of the found major microbes suggests that bacteria-induced fibrinolysis is one of the leading causes of absence of a clot in a post-extraction socket to be clinically insignificant. The initial absence of a clot or its mechanical elimination during formation or the healing period are major causes of dry socket.

Draft Genome Sequence ofEnterobactersp. Strain EA-1, an Electrochemically Active Microorganism Isolated from Tropical Sediment

ABSTRACTEnterobactersp. strain EA-1 is an electrochemically active bacterium isolated from tropical sediment in Singapore. Here, the annotated draft genome assembly of the bacterium is reported. Whole-genome comparison indicates thatEnterobactersp. EA-1, along with a previously sequencedEnterobacterisolate from East Asia, forms a distinct clade within theEnterobactergenus.

Draft Genome Sequence of Cellulosimicrobium Aquatile 3bp, A Glucosidase Active Bacterium and the type Strain of A Novel Species

ABSTRACT: A novel strain of bacterium designated as 3bp, a Gram-stain positive, non-spore forming, non-motile, yellow-pigmented, rod shaped and coccoid aerobic strain was isolated from Panagal reservoir, Nalgonda, Telangana, India, represents a novel species from the phylum Actinobacteria. Here we report the draft genome of the strain 3bp. It comprises ~ 4.31771 Mb with the G + C content of 74.73 %, and a total of 3796 protein-coding genes.

Rapid production of Pd nanoparticle by a marine electrochemically active bacterium Shewanella sp. CNZ-1 and its catalytic performance on 4-nitrophenol reduction

Microbial recovery of Pd through Pd(ii) reduction is emerging as a clean alternative to traditional physical and chemical reclaiming treatments.