Fine-scale diversity patterns in belowground microbial communities are consistent across kingdoms

ABSTRACT The belowground environment is heterogeneous and complex at fine spatial scales. Physical structures, biotic components and abiotic conditions create a patchwork mosaic of potential niches for microbes. Questions remain about mechanisms and patterns of community assembly belowground, including: Do fungal and bacterial communities assemble differently? How do microbes reach the roots of host plants? Within a 4 m2 plot in alpine vegetation, high throughput sequencing of the 16S (bacteria) and ITS1 (fungal) ribosomal RNA genes was used to characterise microbial community composition in roots and adjacent soil of a viviparous host plant (Bistorta vivipara). At fine spatial scales, beta-diversity patterns in belowground bacterial and fungal communities were consistent, although compositional change was greater in bacteria than fungi. Spatial structure and distance-decay relationships were also similar for bacteria and fungi, with significant spatial structure detected at <50 cm among root- but not soil-associated microbes. Recruitment of root microbes from the soil community appeared limited at this sampling and sequencing depth. Possible explanations for this include recruitment from low-abundance populations of soil microbes, active recruitment from neighbouring plants and/or vertical transmission of symbionts to new clones, suggesting varied methods of microbial community assembly for viviparous plants. Our results suggest that even at relatively small spatial scales, deterministic processes play a significant role in belowground microbial community structure and assembly.

Feasibility of hyperspectral vegetation indices for the detection of chlorophyll concentration in three high Arctic plants: Salix polaris, Bistorta vivipara, and Dryas octopetala

Remote sensing, which is based on a reflected electromagnetic spectrum, offers a wide range of research methods. It allows for the identification of plant properties, e.g., chlorophyll, but a registered signal not only comes from green parts but also from dry shoots, soil, and other objects located next to the plants. It is, thus, important to identify the most applicable remote-acquired indices for chlorophyll detection in polar regions, which play a primary role in global monitoring systems but consist of areas with high and low accessibility. This study focuses on an analysis of in situ-acquired hyperspectral properties, which was verified by simultaneously measuring the chlorophyll concentration in three representative arctic plant species, i.e., the prostrate deciduous shrub <em>Salix polaris</em>, the herb <em>Bistorta vivipara</em>, and the prostrate semievergreen shrub <em>Dryas octopetala</em>. This study was conducted at the high Arctic archipelago of Svalbard, Norway. Of the 23 analyzed candidate vegetation and chlorophyll indices, the following showed the best statistical correlations with the optical measurements of chlorophyll concentration: Vogelmann red edge index 1, 2, 3 (VOG 1, 2, 3), Zarco-Tejada and Miller index (ZMI), modified normalized difference vegetation index 705 (mNDVI 705), modified normalized difference index (mND), red edge normalized difference vegetation index (NDVI 705), and Gitelson and Merzlyak index 2 (GM 2). An assessment of the results from this analysis indicates that <em>S. polaris</em> and <em>B. vivipara</em> were in good health, while the health status of <em>D. octopetala</em> was reduced. This is consistent with other studies from the same area. There were also differences between study sites, probably as a result of local variation in environmental conditions. All these indices may be extracted from future satellite missions like EnMAP (Environmental Mapping and Analysis Program) and FLEX (Fluorescence Explorer), thus, enabling the efficient monitoring of vegetation condition in vast and inaccessible polar areas.

RELATIONSHIPS BETWEEN SOIL SEED BANK AND VEGETATION DIVERSITY ON DIFFERENT GRAZING PRESSURE

In a case study, the main objective was to compare three sites with different grazing pressures in Hvitarsida, W-Iceland in relation to current vegetation, seed bank composition and the correlation between those. Our results show that there were significant difference in species composition in above and belowground, giving very little similarity in species composition between seed bank and current vegetation composition. The only exceptions were Agrostis capillaris and Bistorta vivipara that had close similarity between current aboveground vegetation and soil seed bank. Agrostis capillaris had a great abundance in all the sites and Bistorta vivipara proliferates mostly with bulbils that most likely were numerous in the soil. The results of our study agree with current theories on seed bank composition and similar studies,that the similarity between current above ground vegetation and soil seed bank depends on current dominant species (annual or perennial)and the productivity (high or low) of the site.Mongolian Journal of Agricultural Sciences Vol.13(2) 2014: 105-113