Error in geometric morphometric data collection: Combining data from multiple sources

2017 ◽  
Vol 164 (1) ◽  
pp. 62-75 ◽  
Author(s):  
Chris Robinson ◽  
Claire E. Terhune
2017 ◽  
Vol 23 (2) ◽  
pp. 366-375 ◽  
Author(s):  
Jonathan M. Hyde ◽  
Gérald DaCosta ◽  
Constantinos Hatzoglou ◽  
Hannah Weekes ◽  
Bertrand Radiguet ◽  
...  

AbstractIrradiation of reactor pressure vessel (RPV) steels causes the formation of nanoscale microstructural features (termed radiation damage), which affect the mechanical properties of the vessel. A key tool for characterizing these nanoscale features is atom probe tomography (APT), due to its high spatial resolution and the ability to identify different chemical species in three dimensions. Microstructural observations using APT can underpin development of a mechanistic understanding of defect formation. However, with atom probe analyses there are currently multiple methods for analyzing the data. This can result in inconsistencies between results obtained from different researchers and unnecessary scatter when combining data from multiple sources. This makes interpretation of results more complex and calibration of radiation damage models challenging. In this work simulations of a range of different microstructures are used to directly compare different cluster analysis algorithms and identify their strengths and weaknesses.


2011 ◽  
pp. 1215-1234
Author(s):  
Malcolm Battin ◽  
David Knight ◽  
Carl Kuschel

Neonatal care is an extremely data-intensive activity. Physiological monitoring equipment is used extensively along with web-based information tools and knowledge sources. Merging data from multiple sources adds value to this data collection. Neonatal databases assist with collecting, displaying, and analyzing data from a number of sources. Although the construction of such databases can be difficult, it can provide helpful support to clinical practice including surveillance of infectious diseases and even medical error. Along with recording outcomes, such systems are extremely useful for the support of audit and quality improvement as well as research. Electronic information sources are often helpful in education and communication with parents and others, both within the unit and at a distance. Systems are beginning to be used to help with decision making – for example in the case of weaning neonates from ventilators, and this work is likely to become more important in the future.


2020 ◽  
Author(s):  
Breanna A Polascik ◽  
Daryl Jian An Tan ◽  
Karthik Raghunathan ◽  
Hwei Min Kee ◽  
Amanda Lee ◽  
...  

Abstract Perioperative music decreases pain, anxiety, and analgesia requirements while increasing patient satisfaction. We investigated the acceptability of perioperative music at a women’s and children’s hospital in Singapore, seeking to uncover barriers and facilitators to implementation in routine practice over a 12-week period. We used an undergraduate-led Rapid Qualitative Inquiry approach that includes data collection from multiple sources, iterative analysis, and additional data collection when necessary. Participants consisted of anesthesiologists and nurses working in the preoperative area, operating room, and postoperative recovery areas. In Stage 1, nurses and anesthesiologists answered a survey assessing attitudes and knowledge about perioperative music and attended a presentation introducing the intervention. In Stage 2, the results of the Stage 1 survey were disclosed, and nurses and anesthesiologists completed a second survey (Stage 1 survey questions with an additional query about implementation). Twenty-nine nurses were interviewed with semi-structured questions on barriers and facilitators to implementation. In Stage 3, nurses retook the Stage 2 survey after one month of implementation. The implementation of perioperative music was both acceptable and feasible in Singapore. The nurses’ and anesthesiologists’ acceptability increased over time with mostly positive qualitative feedback. Implementation barriers, including patient interest, timing of patient turnover, and added staff workload, appeared minor and could potentially be overcome by utilizing the intervention in the preoperative instead of postoperative area, deploying music in operating rooms with slower turnover, and evenly distributing staff workload. Local implementation stakeholders may make additional recommendations for scaling-up perioperative music interventions to fit other workflows while improving the patient experience.


2020 ◽  
Vol 129 (3) ◽  
pp. 630-643 ◽  
Author(s):  
Michael L Yuan ◽  
Catherine Jung ◽  
Marvalee H Wake ◽  
Ian J Wang

Abstract Ecologically functional traits are the product of several, at times opposing, selective forces. Thus, ecomorphological patterns can be disrupted locally by biotic interactions, such as competition, and may not be consistent across lineages. Here, we studied the evolution of claws and toepads in relationship to macrohabitat (vegetation), use of structural microhabitat (perch height) and congeneric competition for two distantly related Lesser Antillean anole clades: the Anolis bimaculatus and Anolis roquet series. We collected univariate and geometric morphometric data from 254 individuals across 22 species to test the hypotheses that functional morphology should covary with both vegetation and perch height and that the presence of a competitor may disrupt such covariation. Our data showed predictable associations between morphology and macrohabitat on single-species islands but not when a congeneric competitor was present. The outcomes of competition differed between series, however. In the A. bimaculatus series, species with a sympatric congener diverged in claw and toepad traits consistent with functional predictions, whereas A. roquet series anoles showed either no association between habitat and morphology or the opposite pattern. Our results demonstrated that ecomorphological patterns across macrohabitats can be disrupted by competition-driven microhabitat partitioning and that specific morphological responses to similar ecological pressures can vary between lineages.


2018 ◽  
Vol 34 (11) ◽  
pp. e3133 ◽  
Author(s):  
Juan R. Cebral ◽  
Fernando Mut ◽  
Piyusha Gade ◽  
Fangzhou Cheng ◽  
Yasutaka Tobe ◽  
...  

2017 ◽  
Vol 98 (7) ◽  
pp. 1801-1815
Author(s):  
Daniela Sanfelice ◽  
Daniza Molina-Schiller ◽  
Thales R. O. De Freitas

We examined the skulls ofArctocephalus australis,Callorhinus ursinusandOtaria byroniawith the objectives of (1) estimating the development and growth rates and comparing these parameters among the species; (2) describing the development for each linear measure, for each species and sex; (3) determining which variables are best correlated with age; (4) determining age of physical maturity. We employed traditional and geometric morphometric techniques to study the skulls. InA. australisandC. ursinus, skulls of females mature at about 6 years of age, and those of males at about 8 years.Otaria byroniamatures later, at about 9 years. Using geometric morphometric data sets, the rate and constant of growth inA. australisdid not differ between the sexes.Callorhinus ursinusandO. byroniashowed rates significantly different between sexes concerning growth (and in the constant as well), but onlyO. byroniadiffered between sexes in both developmental model parameters (rates and constant). Comparisons between the growth and developmental models showed significant differences in slope and constant. In both treatments employed, a relationship between size and shape dimorphism could be inferred for the skulls of all three species. We conclude that rates or timing of growth and development evolves within a conserved spatiotemporal organization of morphogenesis.


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