scholarly journals Engineering the ligand specificity of the human galectin‐1 by incorporation of tryptophan analogs

ChemBioChem ◽  
2022 ◽  
Author(s):  
Felix Tobola ◽  
Martin Lepšík ◽  
Syeda Rehana Zia ◽  
Hakon Leffler ◽  
Ulf J. Nilsson ◽  
...  
Keyword(s):  
Immunology ◽  
1996 ◽  
Vol 89 (2) ◽  
pp. 238-244 ◽  
Author(s):  
S. K. MENDIRATTA ◽  
N. SINGH ◽  
V. BAL ◽  
S. Rath

2007 ◽  
Vol 129 (34) ◽  
pp. 10489-10502 ◽  
Author(s):  
Christoph Rademacher ◽  
Glen K. Shoemaker ◽  
Hyo-Sun Kim ◽  
Ruixiang Blake Zheng ◽  
Hashem Taha ◽  
...  

2010 ◽  
Vol 137 (3-4) ◽  
pp. 317-321 ◽  
Author(s):  
Songlin Qiao ◽  
Yunchao Liu ◽  
Jiuliang Zhang ◽  
Suzhen Yang ◽  
Bo Wan ◽  
...  

2021 ◽  
Author(s):  
YaoYao Liang ◽  
Juan Luo ◽  
Chenhao Yang ◽  
Shuning Guo ◽  
Bowen Zhang ◽  
...  

Abstract 4-Hydroxymandelic acid (HMA) is widely applied in pharmaceuticals, food and cosmetics. In this study, we aimed to develop an allosteric transcription factors (aTFs) based biosensor for HMA. PobR, an aTF for HMA analog 4-hydroxybenzoic acid, was used to alter its selectivity and create novel aTFs responsive to HMA by directed evolution. We established a PobR mutant library with a capacity of 550,000 mutants using error-prone PCR and Megawhop PCR. Through our screening, two mutants were obtained with responsiveness to HMA. Analysis of each missense mutation indicating residues 122-126 were involved in its PobR ligand specificity. These results showed the effectiveness of directed evolution in switching the ligand specificity of a biosensor and improving HMA production.


FEBS Letters ◽  
2015 ◽  
Vol 589 (15) ◽  
pp. 1995-2000 ◽  
Author(s):  
Sarah Keenan ◽  
Philip A. Lewis ◽  
Sarah J. Wetherill ◽  
Christopher J.R. Dunning ◽  
Gareth J.O. Evans

2017 ◽  
Vol 89 (17) ◽  
pp. 9091-9099 ◽  
Author(s):  
Lifu Xiao ◽  
Karen A. Bailey ◽  
Hao Wang ◽  
Zachary D. Schultz

2022 ◽  
Vol 13 (1) ◽  
Author(s):  
Tzu-Ping Ko ◽  
Yu-Chuan Wang ◽  
Chia-Shin Yang ◽  
Mei-Hui Hou ◽  
Chao-Jung Chen ◽  
...  

AbstractMammalian innate immune sensor STING (STimulator of INterferon Gene) was recently found to originate from bacteria. During phage infection, bacterial STING sense c-di-GMP generated by the CD-NTase (cGAS/DncV-like nucleotidyltransferase) encoded in the same operon and signal suicide commitment as a defense strategy that restricts phage propagation. However, the precise binding mode of c-di-GMP to bacterial STING and the specific recognition mechanism are still elusive. Here, we determine two complex crystal structures of bacterial STING/c-di-GMP, which provide a clear picture of how c-di-GMP is distinguished from other cyclic dinucleotides. The protein-protein interactions further reveal the driving force behind filament formation of bacterial STING. Finally, we group the bacterial STING into two classes based on the conserved motif in β-strand lid, which dictate their ligand specificity and oligomerization mechanism, and propose an evolution-based model that describes the transition from c-di-GMP-dependent signaling in bacteria to 2’3’-cGAMP-dependent signaling in eukaryotes.


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