Unfolding Forces of Titin and Fibronectin Domains Directly Measured by AFM

Author(s):  
Matthias Rief ◽  
Mathias Gautel ◽  
Hermann E. Gaub
Keyword(s):  
1990 ◽  
Vol 272 (3) ◽  
pp. 605-611 ◽  
Author(s):  
K C Ingham ◽  
S A Brew ◽  
D H Atha

Fluorescence polarization, gel exclusion chromatography and affinity chromatography were used to characterize the interaction of heparins of different size with human plasma fibronectin (Fn) and several of its isolated domains. The fluid-phase interaction of Fn with heparin was dominated by the 30 kDa and 40 kDa Hep-2 domains located near the C-terminal ends of the A and B chains respectively. The 30 kDa Hep-2A domain from the heavy chain was indistinguishable from the 40 kDa Hep-2B domain in this respect; the presence of an additional type III homology unit in the latter had no effect on the binding. Evidence was provided that each Hep-2 domain has two binding sites for heparin. The N-terminal Hep-1 domain reacted weakly in fluid phase even though it binds strongly to immobilized heparin. Fn and Hep-2 fragments were rather undiscriminating in their reaction with fluoresceinamine-labelled heparins of different sizes. However, oligosaccharides smaller than the tetradecasaccharide (14-mer) bound Fn with a 5-10-fold lower affinity. These results suggest that the Hep-2 domains of Fn are able to recognize a broad spectrum of oligosaccharides that presumably vary significantly with respect to the amount and spatial distribution of charge.


Anaerobe ◽  
2020 ◽  
Vol 65 ◽  
pp. 102247 ◽  
Author(s):  
Ilya N. Dyakov ◽  
Dilara A. Mavletova ◽  
Irina N. Chernyshova ◽  
Nadezda A. Snegireva ◽  
Marina V. Gavrilova ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (9) ◽  
pp. e0138956 ◽  
Author(s):  
Daniel R. Woldring ◽  
Patrick V. Holec ◽  
Hong Zhou ◽  
Benjamin J. Hackel

2015 ◽  
Vol 9 (1) ◽  
Author(s):  
Pete Heinzelman ◽  
John Krais ◽  
Eliza Ruben ◽  
Robert Pantazes

2011 ◽  
Vol 100 (3) ◽  
pp. 371a
Author(s):  
Christopher A. Lemmon ◽  
Tomoo Ohashi ◽  
Harold P. Erickson
Keyword(s):  
Type Iii ◽  

2017 ◽  
Vol 18 (11) ◽  
pp. 2461 ◽  
Author(s):  
Igor Deyev ◽  
Natalia Chachina ◽  
Egor Zhevlenev ◽  
Alexander Petrenko

2020 ◽  
Vol 219 (7) ◽  
Author(s):  
Astrid G. Petzoldt ◽  
Torsten W.B. Götz ◽  
Jan Heiner Driller ◽  
Janine Lützkendorf ◽  
Suneel Reddy-Alla ◽  
...  

At presynaptic active zones, arrays of large conserved scaffold proteins mediate fast and temporally precise release of synaptic vesicles (SVs). SV release sites could be identified by clusters of Munc13, which allow SVs to dock in defined nanoscale relation to Ca2+ channels. We here show in Drosophila that RIM-binding protein (RIM-BP) connects release sites physically and functionally to the ELKS family Bruchpilot (BRP)-based scaffold engaged in SV recruitment. The RIM-BP N-terminal domain, while dispensable for SV release site organization, was crucial for proper nanoscale patterning of the BRP scaffold and needed for SV recruitment of SVs under strong stimulation. Structural analysis further showed that the RIM-BP fibronectin domains form a “hinge” in the protein center, while the C-terminal SH3 domain tandem binds RIM, Munc13, and Ca2+ channels release machinery collectively. RIM-BPs’ conserved domain architecture seemingly provides a relay to guide SVs from membrane far scaffolds into membrane close release sites.


2004 ◽  
Vol 69 (3) ◽  
pp. 645-658
Author(s):  
Daniel Kavan ◽  
Markéta Vančurová ◽  
Dana Ulbrichová ◽  
Ivana Hladíková ◽  
Miloslav Pospíšil ◽  
...  

Leukocyte common antigens (CD45) are large receptors that are abundantly expressed at the surface of all leukocytes. These receptors are type I membrane glycoproteins possessing two large C-terminal intracellular domains with protein tyrosine phosphatase activity. While the role of these enzyme domains in leukocyte signaling is well documented, the role of the N-terminal extracellular portion of CD45, composed of sequences formed by alternatively spliced exons, the cysteine rich domain, and three type III fibronectin repeats, remains unclear. The presence of fibronectin domains would predict the occurrence of heparin-binding sites, which may account for the documented affinity of CD45 for acid polysaccharides. We addressed this hypothesis using soluble recombinant proteins corresponding to the individual fibronectin domains (FN1 to FN3), and to the entire extracellular portion of CD45 (sCD45). Binding of these proteins to heparin was examined by frontal affinity chromatography. We found that while the sCD45 bound to heparin with Kd of 3.2 × 10-8 mol/l, the binding of FN2 and FN3 was somewhat weaker (Kd was 1.4 and 7.4 × 10-7 mol/l, respectively). The FN1 domain did not interact with heparin. Our results bring definitive evidence for the existence of binding sites for acid polysaccharides in the extracellular domain of CD45. These binding sites may be important for surface interactions of CD45 and for leukocyte signaling.


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