Screening of seedlings of wildSolanum species for resistance to bacterial stem rot caused by soft rot Erwinias

1989 ◽  
Vol 66 (6) ◽  
pp. 379-390 ◽  
Author(s):  
Ewa Lojkowska ◽  
Arthur Kelman
Author(s):  
G. S. Saddler

Abstract A description is provided for Xanthomonas pisi. Information is included on the disease caused by the organism, its transmission, geographical distribution, and hosts. HOSTS: Pisum sativum (Leguminosae); by artificial inoculation: Brassica oleracea (Brassicaceae), Nicotiana tabacum (Solanaceae), Phaseolus vulgaris, Trifolium spp., Vicia faba and Vigna angularis (Leguminosae). DISEASE: Stem rot of pea. The disease attacks stems or stipules at the soil level, rapidly extending upwards. On stems and stipules lesions appear primarily dark green and water-soaked. Lesions turn brown and papery with age; sometimes a chlorotic halo is evident. Leaflets and petioles are also attacked, frequently the base of leaflets adjoining the petioles become brown, papery and wither. By artificial inoculation isolates are strongly pectolytic, causing soft rot in vegetable tissues such as those from Allium cepa, Daucus carota, Rhaphanus sativus and Solanum tuberosum. GEOGRAPHICAL DISTRIBUTION: ASIA: Japan. TRANSMISSION: Not known.


Plant Disease ◽  
2021 ◽  
Author(s):  
Wanxin Han ◽  
Jinhui Wang ◽  
Zheng Li ◽  
Yang Pan ◽  
Dai Zhang ◽  
...  

Pectobacterium species cause blackleg, soft rot and stem rot in potato and many other vegetable crops (Charkowski 2015). In July 2020, potato plants showing characteristic symptoms of aerial stem rot were observed in a field (cv. Xisen 6) in Fengning Manchu Autonomous County, Chengde, Hebei Province (North China). The disease incidence in that field (5 ha in size) was more than 50%. Putative pectolytic bacteria were obtained from symptomatic stem tissues (light brown and water-soaked stem sections) by culturing on the crystal violet pectate (CVP) medium. Bacterial colonies producing pits, were restreaked and purified on Luria-Bertani (LB) agar. The isolates causing stem rot were gram negative and rod shaped, negative for oxidase, urease, indole production, gelatin liquefaction and acid production from maltose and D-sorbitol. All isolates were catalase positive, produced acid from lactose, rhamnose, saccharose, raffinose and D-arabinose, and were tolerant to 5% NaCl, and able to utilize citrate. The bacterial gDNA was extracted using the EasyPure Bacteria Genomic DNA Kit (TransGen Biotech). The 16S rDNA region was amplified by PCR using the universal primer pair 27F/1492R and sequenced. Result of the Blastn analysis of the 16S rDNA amplicons (MZ379788, MZ379789) suggested that the isolates FN20111 and FN20121 belonged to the genus Pectobacterium. To determine the species of the stem rot Pectobacterium isolates, multi-locus sequence analysis (MLSA) was performed with six housekeeping genes acnA, gapA, icdA, mdh, proA and rpoS (MZ403781-MZ403792), and phylogenetic tree was reconstructed using RAxML v8.2.12 (https://github.com/stamatak/standard-RAxML). The result of phylogenetic analysis showed that the stem rot Pectobacterium isolates FN20111 and FN20121 clustered with P. versatile (syn. ‘Candidatus Pectobacterium maceratum’) strains CFBP6051T (Portier et al. 2019), SCC1 (Niemi et al. 2017) and F131 (Shirshikov et al. 2018). And the isolates FN20111 and FN20121 were more closely related to the type strain CFBP6051T than to strains SCC1 and F131. Potato seedlings (cv. Xisen 6 and Favorita) were inoculated with the isolates FN20111 and FN20121 by injecting 100 µl of bacterial suspensions (108 CFU·mL-1) into the upper parts of the stems of potato plants, or injected with 100 µl of 0.9% saline solution as control. The seedlings were grown at 28°C and 50% relative humidity. Three days post-inoculation, only the bacteria-inoculated seedlings showed diseased symptoms resembling to those observed in the field. Bacterial colonies were obtained from the infected stems and were identified using the same PCR primers of housekeeping genes as described above, fulfill Koch’s postulates. P. versatile causing soft rot and blackleg on potato plants has been reported in Finland (Niemi et al. 2017), Russia (Shirshikov et al. 2018), Netherlands (Portier et al. 2019), Poland (Waleron et al. 2019) and in New York State (Ma et al. 2021). To our knowledge, this is the first report of P. versatile causing aerial stem rot of potato in China.


Plant Disease ◽  
2005 ◽  
Vol 89 (9) ◽  
pp. 1014-1014
Author(s):  
E. R. Wright ◽  
M. C. Rivera ◽  
G. Chiesa ◽  
D. Morisigue

Three ornamental species, Osteospermum sp. (L.), Felicia amelloides (L.) Voss, and Ranunculus asiaticus L., cultivated in greenhouses on the outskirts of Buenos Aires, showed sudden wilt and death during October 2002. These species are new ornamentals in Argentina. The diseased plants were cultivated in plastic containers filled with commercial potting mix. Soft rot was observed at the base of the plants. Stem lesions became covered with whitish mycelium that produced large, black sclerotia (5 to 7 mm in diameter) characteristic of Sclerotinia sclerotiorum (Lib.) de Bary (1). The fungus was consistently recovered from infected stem pieces that were disinfested for 1 min in 0.2% NaOCl and plated on potato dextrose agar (PDA), pH 7. Pathogenicity of the three isolates obtained from infected plants was confirmed by inoculating 10 3-month-old healthy plants of each species in 14-cm-diameter plastic pots. Each isolate was inoculated on the host from which it had been isolated. Inoculum consisted of three mycelial plugs from 7-day-old PDA cultures that were placed on the substrate at the base of the plants. Control plants were treated with sterile agar plugs. Inoculated and noninoculated plants were covered with transparent plastic bags for 2 days and incubated in a growth chamber at 20 to 24°C with a 12-h photoperiod. All inoculated plants developed symptoms of leaf yellowing and wilt. Soft and watery tissues were observed at the base of the plants, soon followed by the appearance of white mycelium. Disease symptoms were similar to those observed on the original infected plants and appeared 6, 5, and 3 days after inoculation on Osteospermum sp., F. amelloides, and R. asiaticus, respectively. All inoculated plants died within 3 weeks, and control plants remained healthy. S. sclerotiorum was reisolated from inoculated plants of each species, fulfilling Koch's postulates. To our knowledge, this is the first report of the occurrence of Sclerotinia stem rot on these three plant species in Argentina. Reference: (1) J. E. M. Mordue and P. Holliday. No. 513 in: Descriptions of Pathogenic Fungi and Bacteria. CMI, Kew, Surrey, UK. 1976.


Plant Disease ◽  
1998 ◽  
Vol 82 (1) ◽  
pp. 129-129 ◽  
Author(s):  
C. A. Clark ◽  
M. W. Hoy ◽  
J. P. Bond ◽  
C. Chen ◽  
Y.-K. Goh ◽  
...  

Bacterial root and stem rot of sweetpotato (Ipomoea batatas (L.) Lam.) was first fully characterized in the U.S. in 1977 (2). It was thought to be caused exclusively by Erwinia chrysanthemi. Although a previous report described sweetpotato as a host for E. carotovora subsp. carotovora, based on artificial inoculations, others have reported that neither E. carotovora subsp. carotovora nor E. carotovora subsp. atroseptica decay sweetpotato storage roots (1). In October 1995, storage roots of sweetpotato cv. Beauregard were received from St. Landry Parish, LA, that displayed typical bacterial root rot. Isolations from these roots yielded bacteria that showed a similarity of 0.945 to E. carotovora subsp. carotovora with the Biolog GN Bacterial Identification System (version 3.50). This isolate (Ecc-LH) also differed from isolates of E. chrysanthemi (Ech) from sweetpotato and other hosts in that it was insensitive to erythromycin, did not produce phosphatase or lecithinase, and did not produce gas from glucose. Ecc-LH differed from known strains of E. carotovora subsp. atroseptica in that it did not produce reducing substances from sucrose or acid from palatinose. When Beauregard storage roots were inoculated by inserting micropipette tips containing 50 μl of 1.0 × 108 CFU/ml, both Ecc-LH and Ech-48 produced typical bacterial root rot symptoms. However, when they were compared by infectivity titrations at 28 to 32°C, Ecc-LH was less virulent than Ech-48. Ecc-LH had an ED50 of approximately 1.0 × 106 CFU/ml and did not cause appreciable disease below inoculum concentrations of 1.0 × 105, whereas Ech-48 had an ED50 of approximately 1.0 × 108 and caused soft rot at the lowest concentration tested, 1.0 × 103. Similar disease incidence was observed in infectivity titrations at 22 to 24°C, but Ech-48 caused less severe soft rot. E. carotovora subsp. carotovora was reisolated from inoculated storage roots and its identity was reconfirmed by Biolog. When terminal vine cuttings of Beauregard were dipped in 1.0 × 108 CFU/ml and planted in a greenhouse, bacterial stem rot symptoms developed on plants inoculated with Ech-48 at about 4 weeks postinoculation, or when new growth began. However, no symptoms developed on plants inoculated with Ecc-LH. This is the first report of natural occurrence of E. carotovora subsp. carotovora causing bacterial root rot of sweetpotato in Louisiana. E. chrysanthemi remains the most important pathogen causing bacterial soft rot in sweetpotato since it is widely associated with sweetpotato, is more virulent on storage roots and also causes a stem rot. E. carotovora subsp. carotovora can cause root rot, but has been isolated in only one location to date, is less virulent on storage roots, and apparently does not cause stem rot on the predominant cultivar in U.S. sweetpotato production, Beauregard. References: (1) C. A. Clark and J. W. Moyer. 1988. Compendium of Sweet Potato Diseases. American Phytopathological Society, St. Paul, MN. (2) N. W. Schaad and D. Brenner. Phytopathology 67:302, 1977.


2019 ◽  
Vol 25 (4) ◽  
pp. 402-406
Author(s):  
Mariana Cunha Stutz ◽  
Renato Carrer Filho ◽  
Geisiane Alves Rocha ◽  
Érico de Campos Dianese ◽  
Marcos Gomes da Cunha

Abstract Zamioculcas zamiifolia (Araceae) is one of the most widely grown exotic species in Brazil as ornamental plants and in landscape design. Despite tolerating transport and being well adapted to low-light environments, this ornamental is attacked by different pathogens. Thus, the aim was to detect and identify the pathogen that causes stem rot in commercial Z. zamiifolia crops. Z. zamiifolia plants exhibiting stem rot symptoms were sent for phytosanitary diagnosis. In a culture medium, the fungal isolate obtained (SR-001) displayed the following morphological characteristics: cotton-like aerial mycelium, septate hyaline hyphae with no spore production, and the formation of small brown spherical sclerotia. To confirm pathogenicity, Z. zamiifolia plants were inoculated with the SR-001 isolate and, after fifteen days, the fungus was re-isolated when the same rot symptoms emerged. The SR-001 isolate was identified as Sclerotium rolfsii and its representative sequence was deposited in GenBank (Access MG694322). This fungal isolate has not been associated with diseases in Z. zamiifolia in Brazil, and this is the first report of the fungus infecting this ornamental plant species in a cultivated area.


Plant Disease ◽  
2004 ◽  
Vol 88 (3) ◽  
pp. 310-310 ◽  
Author(s):  
R. Cetinkaya-Yildiz ◽  
M. Mirik ◽  
Y. Aysan ◽  
M. Kusek ◽  
F. Sahin

Severe outbreaks of bacterial stem rot disease occurred on dieffenbachia plants (Dieffenbachia amoena cv. Tropic Snow) during the autumn and spring seasons of 2002 and 2003 in two commercial glasshouses (3.5 ha) near Adana and Mersin in the Eastern Mediterranean Region of Turkey. Characteristic symptoms of the disease were wilting of the lower leaves, darkening and water soaking of the leaves and stem at or below the soil level, and browning in the vessel and pith of the diseased plants. Eventually, the stem and leaves completely rotted, and the plants collapsed. Nearly 30 and 40% (2002 and 2003, respectively) of the 20,000 potted plants in the glasshouses were destroyed because of the disease. Cuttings often developed a typical soft rot during propagation. Disease incidence was estimated at approximately 50% on propagating material during 2003. Isolations were made from rotted stems, leaves, and discolored vessels of the dieffenbachia plants on King's medium B. Bacteria consistently isolated from the diseased tissues formed white-to-cream colonies on the medium. Bacteria from purified colonies were gram, oxidase, and arginine dyhidrolase negative, catalase positive, and facultative anaerobic. Ten representative strains all fermented glucose and reduced nitrates to nitrites. The strains caused soft rot of potato slices within 24 h at 25°C. All strains were resistant to erythromycin in an antibiotic disk (15 μg) assay. Negative results were obtained from utilization of α-methyl glycoside, reducing substance from sucrose, and indole production from tryptophane and phosphathase activity. Positive results were obtained from pectate, aesculin, and gelatine liquefaction for all strains. Acid was produced from glucose, sucrose, mannitol, mannose, lactose, raffinose, melibiose, trehalose, and L(+)-arabinose but not Darabinose, sorbitol, inulin, and maltose. Pathogenicity was confirmed by needle-stab inoculation at the stem on three plants each of dieffenbachia and tomato plants (5-week-old cv. H-2274). Sterile distilled water was used as a negative control. All plants were covered with polyethylene bags for 48 h at 25°C. Within 72 h after inoculation, water-soaking and soft-rot symptoms were observed on dieffenbachia and tomato plants. All of the bacterial strains isolated in the present study were identified as Erwinia carotovora subsp. carotovora (Jones) based on fatty acid methyl ester analysis with similarity indices ranging from 80 to 94%. Furthermore, Biolog GN (Department of Plant Protection, Faculty of Agriculture, Ataturk University, Erzurum, Turkey) profiles identified them as the same pathovar with similarity values of 67 to 72%. All of the test results were similar to those of reference strain GSPB 435 (Gottinger Sammlung phytopathogener Bakterien, Georg-August University, Gottingen, Germany) of E. carotovora subsp. carotovora used in this study. To our knowledge, this is the first report of the occurrence and outbreak of a bacterial rot disease on dieffenbachia grown in the Eastern Mediterranean Region of Turkey. Contaminated cuttings may be the primary source of inoculum within and between glasshouses.


Author(s):  
Yeshitila Degefu ◽  
Sanna Jokela ◽  
Erkki Joki-Tokola ◽  
Elina Virtanen

Erwinia carotovora subsp. atroseptica (Eca), Erwinia carotovora subsp. carotovora (Ecc) and Erwinia chrysanthemi (Ech) are the different sub species of Erwinia that cause the diseases commonly known as blackleg, aerial stem rot and soft rot on potato. Blackleg and aerial stem rot affect vines during the growing season, whereas soft rot affects tubers in the field and during transit and storage. The three species can cause soft rot under cool and moist conditions. E. carotovora subsp. atroseptica is the major cause of blackleg, a blackening of the stem base of potato plants, which originates from the mother tuber (Pérombelon and Kelman, 1987). Erwinia carotovora subsp. carotovora mainly causes aerial stem rot (aerial blackleg), but under high temperatures it has been reported to cause blackleg like symptoms. E. chrysanthemi also induces blackleg-like symptoms. Until recently E. chrysanthemi had been mainly confined to warmer climates of Europe, Australia and the tropics. To date the species has been known to occur in cool temperate regions including Finland. In Finland E. chrysanthemi the strain has been reported for the first time in 2004 and it appears to spread fast in certain parts of country (Degefu, unpublished, Pirhonen, personal communication). Although infested crop residues and rotting tubers are among the important sources of inoculum, latent infections in seed tuber provide the major source of infection in potato production (Hannukkala and Segertedt, 2004). At the seed potato laboratory MTT, Ruukki we are carrying out research and services on PCR (DNA) based detection of latent infection of blackleg and soft rot Erwinia strains. The enrichment of the bacteria in semi selective liquid medium prior to PCR ( BIO-PCR) is an important initial step for the success in PCR detection extremely low number of the target bacteria from tubers. The different strains appear to differ in their ability to compete with other saprophytes and reach the target detection limit of bacterial population during the enrichment culture of the potato peel extract. Results of prior PCR enrichment of the bacteria, detection limits of the different strains and preliminary data, from the analysis of some seed lots from the high grade area of north Ostrobothnia and Åland regions, on the occurrence of the strains and the new trends of introduction and spread of E. chrysanthemi in Finland are presented and discussed. Evaluation of the current status of Erwinia diagnostics and areas of future research are highlighted


Plant Disease ◽  
2002 ◽  
Vol 86 (4) ◽  
pp. 443-443 ◽  
Author(s):  
A. Obradovic ◽  
M. Arsenijevic

In 1989, a wilt and stem rot of muskmelon (Cucumis melo L.) was reported on seedlings grown under plastic in northern Serbia (1). In 1998, a similar disease of watermelon (Citrullus vulgaris L.) transplants occurred in central Serbia, resulting in losses estimated at 20% of plants grown in the nursery. Initial symptoms appeared as water-soaked lesions on the stem and lower surfaces of cotyledons and first true leaves. Necrosis started from leaf water-soaked areas and spread over the entire plant. Many stems softened and toppled. Wilting was also associated with the latter stages of the disease. Six representative strains isolated from water-soaked stem lesions on muskmelon in 1989 (three strains) and on watermelon in 1998 (three strains) were characterized. All strains were gram negative, strictly aerobic, motile, rod-shaped, and fluorescent on King's B medium, but negative for levan production, soft rot of potato, and arginine dihydrolase activity. Furthermore, strains were oxidase positive and induced a strong hypersensitive reaction in tobacco leaves. All of these reactions are characteristic of Pseudomonas cichorii (2). All six strains were confirmed to be P. cichorii based on analysis of cell-wall fatty acid profiles using the Microbial Identification System (MIDI, Newark, DE). Similarity indices ranged from 0.87 to 0.97. Pathogenicity of the P. cichorii strains was confirmed by prick inoculation of the hypocotyl of 2-week-old plants of domestic muskmelon cv. Sezam and watermelon cv. Rosa. Six plants of each cultivar were pricked with a dissecting needle dipped into a bacterial suspension (108 CFU/ml) prepared from each of the six strains and placed in a humidity chamber at 26°C for 48 h. Water-soaking occurred on all plants around the inoculation site after 24 h. The upper part of the plants lost turgor and wilted. Eventually, the hypocotyl and leaf veins became water-soaked, and the stem tissue softened, resulting in toppling of plants. The symptoms were identical to those described on muskmelon in 1989 and observed on watermelon in 1998. No symptoms developed on control plants. The bacterium was reisolated from the inoculated plants and shown to be identical to the original strains, confirming that P. cichorii was responsible for the disease of muskmelon and watermelon seedlings in 1989 and 1998, respectively. References: (1) M. Arsenijevic and V. Stojsin. Contemp. Agric. 9:487, 1989. (2) R. A. Lelliott et al. J. Appl. Bacteriol. 29:470, 1966.


EDIS ◽  
2017 ◽  
Vol 2017 (4) ◽  
Author(s):  
Keith W. Wynn ◽  
Nicholas S. Dufault ◽  
Rebecca L. Barocco

This ten-page fact sheet includes a summary of various fungicide spray programs for fungal disease control of early leaf spot, late leaf spot, and white mold/stem rot of peanut in 2012-2016 on-farm trials in Hamilton County. Written by K.W. Wynn, N.S. Dufault, and R.L. Barocco and published by the Plant Pathology Department.http://edis.ifas.ufl.edu/pp334


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