scholarly journals C-Terminal Splice Variation Reveals New Insights into Calmodulin Regulation of Ca V 1.4 Channels

2017 ◽  
Vol 112 (3) ◽  
pp. 107a-108a
Author(s):  
Brittany Williams ◽  
Vasily Kerov ◽  
Daniel Soh ◽  
Amy Lee
Keyword(s):  
2012 ◽  
Vol 166 (1) ◽  
pp. 98-109 ◽  
Author(s):  
Sebastian GB Furness ◽  
Denise Wootten ◽  
Arthur Christopoulos ◽  
Patrick M Sexton

eLife ◽  
2016 ◽  
Vol 5 ◽  
Author(s):  
Jorge Vaquero-Garcia ◽  
Alejandro Barrera ◽  
Matthew R Gazzara ◽  
Juan González-Vallinas ◽  
Nicholas F Lahens ◽  
...  

Alternative splicing (AS) can critically affect gene function and disease, yet mapping splicing variations remains a challenge. Here, we propose a new approach to define and quantify mRNA splicing in units of local splicing variations (LSVs). LSVs capture previously defined types of alternative splicing as well as more complex transcript variations. Building the first genome wide map of LSVs from twelve mouse tissues, we find complex LSVs constitute over 30% of tissue dependent transcript variations and affect specific protein families. We show the prevalence of complex LSVs is conserved in humans and identify hundreds of LSVs that are specific to brain subregions or altered in Alzheimer's patients. Amongst those are novel isoforms in the Camk2 family and a novel poison exon in Ptbp1, a key splice factor in neurogenesis. We anticipate the approach presented here will advance the ability to relate tissue-specific splice variation to genetic variation, phenotype, and disease.


2009 ◽  
Vol 297 (2) ◽  
pp. H680-H688 ◽  
Author(s):  
Xiaoyang Cheng ◽  
Judith Pachuau ◽  
Eva Blaskova ◽  
Maria Asuncion-Chin ◽  
Jianxi Liu ◽  
...  

Voltage-dependent calcium (Ca2+, CaV1.2) channels are the primary Ca2+ entry pathway in smooth muscle cells of resistance-size (myogenic) arteries, but their molecular identity remains unclear. Here we identified and quantified CaV1.2 α1-subunit splice variation in myocytes of rat resistance-size (100–200 μm diameter) cerebral arteries. Full-length clones containing either exon 1b or the recently identified exon 1c exhibited additional primary splice variation at exons 9*, 21/22, 31/32, and ± 33. Real-time PCR confirmed the findings from full-length clones and indicated that the major CaV1.2 variant contained exons 1c, 8, 21, and 32+33, with ∼57% containing 9*. Exon 9* was more prevalent in clones containing 1c (72%) than in those containing 1b (33%), suggesting exon-selective combinatorial splicing. To examine the functional significance of this splicing profile, membrane currents produced by each of the four exon 1b/c/ ± 9* variants were characterized following transfection in HEK293 cells. Exon 1c and 9* caused similar hyperpolarizing shifts in both current-voltage relationships and voltage-dependent activation of currents. Furthermore, exon 9* induced a hyperpolarizing shift only in the voltage-dependent activation of channels containing exon 1b, but not in those containing exon 1c. In contrast, exon 1b, 1c, or +9* did not alter voltage-dependent inactivation. In summary, we have identified the CaV1.2 α1-subunit splice variant population that is expressed in myocytes of resistance-size arteries and the unique electrophysiological properties of recombinant channels formed by exon 1 and 9* variation. The predominance of exon 1c and 9* in smooth muscle cell CaV1.2 channels causes a hyperpolarizing shift in the voltage sensitivity of currents toward the physiological arterial voltage range.


Author(s):  
Kamille C.J. Smidt ◽  
Lise Lotte Hansen ◽  
T.Max.M. Søgaard ◽  
Lone K. Petersen ◽  
Ulla B. Knudsen ◽  
...  

2006 ◽  
Vol 90 (10) ◽  
pp. 3570-3581 ◽  
Author(s):  
Liping He ◽  
Jerod Denton ◽  
Keith Nehrke ◽  
Kevin Strange

2005 ◽  
Vol 21 (Suppl 1) ◽  
pp. i107-i115 ◽  
Author(s):  
M. S. Cline ◽  
J. Blume ◽  
S. Cawley ◽  
T. A. Clark ◽  
J.-S. Hu ◽  
...  

2006 ◽  
Vol 35 (1) ◽  
pp. 118-126 ◽  
Author(s):  
Caroline Swan ◽  
Susan A. Richards ◽  
Nathalie P. Duroudier ◽  
Ian Sayers ◽  
Ian P. Hall

2013 ◽  
Vol 2013 ◽  
pp. 1-13
Author(s):  
Nikolai M. Soldatov

Cav1.2 calcium channels are the principal proteins involved in electrical, mechanical, and/or signaling functions of the cell. Cav1.2 couples membrane depolarization to the transient increase in intracellular Ca2+ concentration that is a trigger for muscle contraction and CREB-dependent transcriptional activation. The CACNA1C gene coding for the Cav1.2 pore-forming α1C subunit is subject to extensive alternative splicing. This review is the first attempt to follow the association between cell proliferation, Cav1.2 expression and splice variation, and atherosclerosis. Based on insights into the association between the atherosclerosis-induced molecular remodeling of Cav1.2, proliferation of vascular smooth muscle cells, and CREB-dependent transcriptional signaling, this review will give a perspective outlook for the use of the CACNA1C exon skipping as a new potential gene therapy approach to atherosclerosis.


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