scholarly journals Comparative metagenomics reveals alterations in the soil bacterial community driven by N-fertilizer and Amino 16® application in lettuce

Genomics Data ◽  
2017 ◽  
Vol 14 ◽  
pp. 14-17 ◽  
Author(s):  
Apostolos Kalivas ◽  
Ioannis Ganopoulos ◽  
Fotis Psomopoulos ◽  
Ioannis Grigoriadis ◽  
Aliki Xanthopoulou ◽  
...  
2018 ◽  
Vol 64 (No. 12) ◽  
pp. 571-577 ◽  
Author(s):  
Chen Yanling ◽  
Liu Jintao ◽  
Liu Shutang

Soil bacteria are critical to maintain soil fertility. In this study, soil chemical properties, enzyme activities and soil bacterial community from a long-term fertilizer experiment (37 years) were analysed to elaborate the effects of long-term mineral fertilizer application on soil enzyme activities and bacterial community composition. Compared with control treatment, bacterial community richness was reduced in low nitrogen (N) fertilizer and high N fertilizer treatments and increased in high N fertilizer and phosphorus (P), high N fertilizer and potassium (K) (N2K), and high N fertilizer, P and K (N2PK) treatments. The distribution of each phylum and genera was obviously changed and the range of the dominant phyla was not affected in all fertilization treatments. Principal component analysis showed that soil bacterial community in the N2K treatment was clearly different than in the N2PK treatment. The N2PK treatment had much higher available P, total organic carbon, invertase, urease and phosphatase activities than the N2K treatment, which might change soil bacterial community composition. In conclusion, fertilization with combined application of P, K and N in appropriate proportions is an optimum approach for improving soil quality and soil bacterial community abundance in non-calcareous fluro-aquic soils in the North China Plain.


2016 ◽  
Vol 159 ◽  
pp. 1-8 ◽  
Author(s):  
Yosef Chávez-Romero ◽  
Yendi E. Navarro-Noya ◽  
Silvia C. Reynoso-Martínez ◽  
Yohana Sarria-Guzmán ◽  
Bram Govaerts ◽  
...  

AMB Express ◽  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Zuren Li ◽  
Jincai Han ◽  
Haodong Bai ◽  
Di Peng ◽  
Lifeng Wang ◽  
...  

AbstractApplication of a novel bioorganic fertilizer (BIO) has been effectively used to inhibit weeds in rice paddies. To identify changes in soil bacterial community and enzymes in response to BIO treatments, field experiments were carried out in five major rice-growing areas in China. The dominant phylogenetic groups recorded included Proteobacteria, Actinobacteria, Bacteroidetes, Firmicutes and Acidobacteria. Anaeromyxobacter, Bacteroides, Bifidobacterium, Escherichia- Shigella, Geobacter and Haliangium were significantly different between BIO-treatment and untreated control and aided in general function (R), amino acid transport, metabolism (E) and transcription (K) clusters. The soil chemical properties and enzyme activities were less affected by BIO at these study sites. RDA analysis showed that soil bacterial community had a significant positive correlations among northern latitude, eastern longitude, exchangeable K, total K, total P, soil pH, and total N, except for organic matter, hydrolytic N and extractable P. Overall, our work showed that application of BIO does not alter the main community structure and functional diversity of soil bacteria in rice paddies and should be encouraged for use as a sustainable weed management strategy.


2021 ◽  
Vol 167 ◽  
pp. 104096
Author(s):  
Lea H. Hiltunen ◽  
Oili Tarvainen ◽  
Jani Kelloniemi ◽  
Jaakko Tanskanen ◽  
Jouni Karhu ◽  
...  

2021 ◽  
Vol 11 (3) ◽  
pp. 918
Author(s):  
Lingzi Mo ◽  
Augusto Zanella ◽  
Xiaohua Chen ◽  
Bin Peng ◽  
Jiahui Lin ◽  
...  

Continuing nitrogen (N) deposition has a wide-ranging impact on terrestrial ecosystems. To test the hypothesis that, under N deposition, bacterial communities could suffer a negative impact, and in a relatively short timeframe, an experiment was carried out for a year in an urban area featuring a cover of Bermuda grass (Cynodon dactylon) and simulating environmental N deposition. NH4NO3 was added as external N source, with four dosages (N0 = 0 kg N ha−2 y−1, N1 = 50 kg N ha−2 y−1, N2 = 100 kg N ha−2 y−1, N3 = 150 kg N ha−2 y−1). We analyzed the bacterial community composition after soil DNA extraction through the pyrosequencing of the 16S rRNA gene amplicons. N deposition resulted in soil bacterial community changes at a clear dosage-dependent rate. Soil bacterial diversity and evenness showed a clear trend of time-dependent decline under repeated N application. Ammonium nitrogen enrichment, either directly or in relation to pH decrease, resulted in the main environmental factor related to the shift of taxa proportions within the urban green space soil bacterial community and qualified as a putative important driver of bacterial diversity abatement. Such an impact on soil life induced by N deposition may pose a serious threat to urban soil ecosystem stability and surrounding areas.


2015 ◽  
Vol 91 (5) ◽  
Author(s):  
Alexandra B. Wolf ◽  
Max-Bernhard Rudnick ◽  
Wietse de Boer ◽  
George A. Kowalchuk

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