scholarly journals A Kinase–Phosphatase–Transcription Factor Module Regulates Adventitious Root Emergence in Arabidopsis Root–Hypocotyl Junctions

2020 ◽  
Vol 13 (8) ◽  
pp. 1162-1177 ◽  
Author(s):  
Zechen Bai ◽  
Jing Zhang ◽  
Xin Ning ◽  
Hailong Guo ◽  
Xiumei Xu ◽  
...  
2017 ◽  
Vol 60 (5) ◽  
pp. 462-471 ◽  
Author(s):  
Jeong-eun Choe ◽  
Bohye Kim ◽  
Eun Kyung Yoon ◽  
Sejeong Jang ◽  
Gyuree Kim ◽  
...  

2016 ◽  
Vol 113 (29) ◽  
pp. 8326-8331 ◽  
Author(s):  
Michael T. Raissig ◽  
Emily Abrash ◽  
Akhila Bettadapur ◽  
John P. Vogel ◽  
Dominique C. Bergmann

Stomata, epidermal valves facilitating plant–atmosphere gas exchange, represent a powerful model for understanding cell fate and pattern in plants. Core basic helix–loop–helix (bHLH) transcription factors regulating stomatal development were identified in Arabidopsis, but this dicot’s developmental pattern and stomatal morphology represent only one of many possibilities in nature. Here, using unbiased forward genetic screens, followed by analysis of reporters and engineered mutants, we show that stomatal initiation in the grass Brachypodium distachyon uses orthologs of stomatal regulators known from Arabidopsis but that the function and behavior of individual genes, the relationships among genes, and the regulation of their protein products have diverged. Our results highlight ways in which a kernel of conserved genes may be alternatively wired to produce diversity in patterning and morphology and suggest that the stomatal transcription factor module is a prime target for breeding or genome modification to improve plant productivity.


2020 ◽  
Author(s):  
Zenghui Wang ◽  
Jialin Li ◽  
Xuemei Yang ◽  
Haixia Tang ◽  
Lijuan Feng ◽  
...  

Abstract Background: The self-rooted seedling is widely used in pomegranate planting industry currently; However, the root system of self-rooted seedling is shallow and poor cold resistance. Therefore, the study of the molecular mechanisms of pomegranate adventitious root gravitropism is very important for developing deep-rooted pomegranate cultivars.Results: We report the pomegranate FOUR LIPS (PgFLP) that play an key role in regulating the gravitropic set-point angle of pomegranate adventitious root in response to gravity signal. In our study, PgFLP directly regulates the transcriptional expression of PgPIN10 by binding to its promoter, thus regulating the GSA of adventitious root in pomegranate. Additionally, the 35S::PgFLP show stronger gravitational response than wild-type, leading to a smaller GSA in Arabidopsis lateral roots, indicating that PgFLP participates in regulating the GSA of adventitious root via PgPIN10 in pomegranate. Conclusion: Our results confirm that the transcriptional regulation of PgPIN10 by R2R3-MYB transcription factor PgFLP in setting the gravitropic set-point angle of pomegranate adventitious root in response to gravity signal.


2019 ◽  
Vol 39 (7) ◽  
pp. 1173-1186
Author(s):  
Shi-Hui Niu ◽  
Shuang-Wei Liu ◽  
Jing-Jing Ma ◽  
Fang-Xu Han ◽  
Yue Li ◽  
...  

Abstract It has long been known that the pollen shedding time in pine trees is correlated with temperature, but the molecular basis for this has remained largely unknown. To better understand the mechanisms driving temperature response and to identify the hub regulators of pollen shedding time regulation in Pinus tabuliformis Carr., we identified a set of temperature-sensitive genes by carrying out a comparative transcriptome analysis using six early pollen shedding trees (EPs) and six late pollen shedding trees (LPs) during mid-winter and at three consecutive time points in early spring. We carried out a weighted gene co-expression network analysis and constructed a transcription factor (TF) collaborative network, merging the common but differentially expressed TFs of the EPs and LPs into a joint network. We found five hub genes in the core TF module whose expression was rapidly induced by low temperatures. The transcriptional activity of this TF module was strongly associated with pollen shedding time, and likely to produce the fine balance between cold hardiness and growth activity in early spring. We confirmed the key role of temperature in regulating flowering time and identified a transcription factor module associated with pollen shedding time in P. tabuliformis. This suggests that repression of growth activity by repressors is the main mechanism balancing growth and cold hardiness in pine trees in early spring. Our results provide new insights into the molecular mechanisms regulating seasonal flowering time in pines.


2012 ◽  
Vol 160 (4) ◽  
pp. 1996-2006 ◽  
Author(s):  
Adeline Rigal ◽  
Yordan S. Yordanov ◽  
Irene Perrone ◽  
Anna Karlberg ◽  
Emilie Tisserant ◽  
...  

2009 ◽  
Vol 58 (3) ◽  
pp. 450-463 ◽  
Author(s):  
Clayton T. Larue ◽  
Jiangqi Wen ◽  
John C. Walker

2004 ◽  
Vol 336 (3) ◽  
pp. 589-595 ◽  
Author(s):  
N. Wick ◽  
A. Schleiffer ◽  
L.A. Huber ◽  
I. Vietor

2019 ◽  
Vol 99 (5) ◽  
pp. 937-949 ◽  
Author(s):  
Christian Godon ◽  
Caroline Mercier ◽  
Xiaoyue Wang ◽  
Pascale David ◽  
Pierre Richaud ◽  
...  

2021 ◽  
Vol 23 (1) ◽  
pp. 383
Author(s):  
Zhi-Fang Wang ◽  
Ting-Wei Mi ◽  
Yong-Qiang Gao ◽  
Han-Qian Feng ◽  
Wei-Hua Wu ◽  
...  

Potassium and nitrogen are essential mineral elements for plant growth and development. The protein kinase LKS1/CIPK23 is involved in both K+ and NH4+ uptake in Arabidopsis root. The transcripts of LKS1 can be induced by low K+ (0.1 mM) and high NH4+ (30 mM); however, the molecular mechanism is still unknown. In this study, we isolated the transcription factor STOP1 that positively regulates LKS1 transcription in Arabidopsis responses to both low-K+ and high-NH4+ stresses. STOP1 proteins can directly bind to the LKS1 promoter, promoting its transcription. The stop1 mutants displayed a leaf chlorosis phenotype similar to lks1 mutant when grown on low-K+ and high-NH4+ medium. On the other hand, STOP1 overexpressing plants exhibited a similar tolerant phenotype to LKS1 overexpressing plants. The transcript level of STOP1 was only upregulated by low K+ rather than high NH4+; however, the accumulation of STOP1 protein in the nucleus was required for the upregulation of LKS1 transcripts in both low-K+ and high-NH4+ responses. Our data demonstrate that STOP1 positively regulates LKS1 transcription under low-K+ and high-NH4+ conditions; therefore, LKS1 promotes K+ uptake and inhibits NH4+ uptake. The STOP1/LKS1 pathway plays crucial roles in K+ and NH4+ homeostasis, which coordinates potassium and nitrogen balance in plants in response to external fluctuating nutrient levels.


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