Arabidopsis thaliana peroxidases involved in lignin biosynthesis: In silico promoter analysis and hormonal regulation

2014 ◽  
Vol 80 ◽  
pp. 192-202 ◽  
Author(s):  
Joaquín Herrero ◽  
Alberto Esteban Carrasco ◽  
José Miguel Zapata
Author(s):  
Fanella Zamcho ◽  
Aaron Newborn ◽  
Ayesha Karamat ◽  
Rouzbeh Tehrani ◽  
Nancy Pleshko ◽  
...  

Planta ◽  
2013 ◽  
Vol 237 (6) ◽  
pp. 1599-1612 ◽  
Author(s):  
Joaquín Herrero ◽  
Francisco Fernández-Pérez ◽  
Tatiana Yebra ◽  
Esther Novo-Uzal ◽  
Federico Pomar ◽  
...  

2021 ◽  
Vol 12 ◽  
Author(s):  
Mónica L. García-Gómez ◽  
Adriana Garay-Arroyo ◽  
Berenice García-Ponce ◽  
María de la Paz Sánchez ◽  
Elena R. Álvarez-Buylla

The root stem cell niche (SCN) of Arabidopsis thaliana consists of the quiescent center (QC) cells and the surrounding initial stem cells that produce progeny to replenish all the tissues of the root. The QC cells divide rather slowly relative to the initials, yet most root tissues can be formed from these cells, depending on the requirements of the plant. Hormones are fundamental cues that link such needs with the cell proliferation and differentiation dynamics at the root SCN. Nonetheless, the crosstalk between hormone signaling and the mechanisms that regulate developmental adjustments is still not fully understood. Developmental transcriptional regulatory networks modulate hormone biosynthesis, metabolism, and signaling, and conversely, hormonal responses can affect the expression of transcription factors involved in the spatiotemporal patterning at the root SCN. Hence, a complex genetic–hormonal regulatory network underlies root patterning, growth, and plasticity in response to changing environmental conditions. In this review, we summarize the scientific literature regarding the role of hormones in the regulation of QC cell proliferation and discuss how hormonal signaling pathways may be integrated with the gene regulatory network that underlies cell fate in the root SCN. The conceptual framework we present aims to contribute to the understanding of the mechanisms by which hormonal pathways act as integrators of environmental cues to impact on SCN activity.


Plant Gene ◽  
2019 ◽  
Vol 19 ◽  
pp. 100189 ◽  
Author(s):  
Parviz Heidari ◽  
Mostafa Ahmadizadeh ◽  
Fatemeh Izanlo ◽  
Thomas Nussbaumer

2020 ◽  
Vol 21 (17) ◽  
pp. 6438
Author(s):  
Miriam Führer ◽  
Angelika Gaidora ◽  
Peter Venhuizen ◽  
Jedrzej Dobrogojski ◽  
Chloé Béziat ◽  
...  

Plants adjust their architecture to a constantly changing environment, requiring adaptation of differential growth. Despite their importance, molecular switches, which define growth transitions, are largely unknown. Apical hook development in dark grown Arabidopsis thaliana (A. thaliana) seedlings serves as a suitable model for differential growth transition in plants. Here, we show that the phytohormone auxin counteracts the light-induced growth transition during apical hook opening. We, subsequently, identified genes which are inversely regulated by light and auxin. We used in silico analysis of the regulatory elements in this set of genes and subsequently used natural variation in gene expression to uncover correlations between underlying transcription factors and the in silico predicted target genes. This approach uncovered that MADS box transcription factor AGAMOUS-LIKE 8 (AGL8)/FRUITFULL (FUL) modulates apical hook opening. Our data shows that transient FUL expression represses the expression of growth stimulating genes during early phases of apical hook development and therewith guards the transition to growth promotion for apical hook opening. Here, we propose a role for FUL in setting tissue identity, thereby regulating differential growth during apical hook development.


2007 ◽  
Vol 164 (3) ◽  
pp. 371-373 ◽  
Author(s):  
Juana G. De Diego ◽  
F. David Rodríguez ◽  
José Luis Rodríguez Lorenzo ◽  
Emilio Cervantes

2009 ◽  
Vol 1272 ◽  
pp. 3-13 ◽  
Author(s):  
Dirk A. Ridder ◽  
Svetlana Bulashevska ◽  
Ganta Vijay Chaitanya ◽  
Phanithi Prakash Babu ◽  
Benedikt Brors ◽  
...  

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