Analysis of polypeptide inter-chain entanglements using swelling dynamics of a spin coated protein layer

2019 ◽  
Vol 691 ◽  
pp. 137605 ◽  
Author(s):  
Amarjeet Singh ◽  
Manabendra Mukherjee
1977 ◽  
Vol 14 (5) ◽  
pp. 250-255
Author(s):  
Hiroyuki MEKADA ◽  
Isao UMEDA ◽  
Nobuyoshi HAYASHI ◽  
Jun-ichi OKUMURA ◽  
Hiro-omi YOKOTA

1991 ◽  
Vol 14 (3) ◽  
pp. 209-217 ◽  
Author(s):  
Gang-Won Cheong ◽  
Zdenka Cejka ◽  
Jürgen Peters ◽  
Karl O. Stetter ◽  
Wolfgang Baumeister

1964 ◽  
Vol s3-105 (72) ◽  
pp. 385-389
Author(s):  
K. E. DIXON ◽  
E. H. MERCER

Observations with the electron microscope have shown that 4 major layers can be distinguished in the cyst wall: (a) an outer tanned-protein layer, consisting of a meshwork of irregular bodies made up of cigar-shaped particles; (b) a predominantly mucopolysaccharide, finely-fibrous layer, closely adherent to the tanned layer; (c) an inner, mainly mucopolysaccharide layer, which can be resolved into two layers differing in fine texture; (d) a dense, compact layer, composed of numerous protein sheets stabilized by disulphide linkages. This layer is formed from tightly wound scrolls, developed in intracellular vacuoles, which are unrolled at the surface of the animal after secretion.


1950 ◽  
Vol s3-91 (16) ◽  
pp. 429-452
Author(s):  
V. B. WIGGLESWORTH ◽  
J.W. L. BEAMENT

By the use of the cobalt sulphide injection technique the distribution of air in the shell of a number of insect eggs has been studied. Air is usually confined to an inner layer of porous protein, connected with the atmosphere through pores of varying type which are likewise filled with spongy material. In Rhodnius the ‘resistant protein layer’ which lines the shell is the porous structure and the ‘pseudomicropyles’ connect this layer to the exterior. The arrangement in Cimex is similar. In Oncopeltus the spongy walls of the ‘sperm cups’ convey air to a porous inner layer. After laying, the lumen of each cup (the micropylar canal) is occluded with solid cement. In Dixippus the so-called ‘micropyle’ in the ‘scar’ of the egg is the respiratory pore. It is filled with spongy protein containing air and conducts the air to the spongy inner layer of the endochorion. As the egg develops and its contents are reduced in volume, free air collects between the two layers of the endochorion in the region of the pore. In Blattella an elaborate stigmatic apparatus which is moulded in the crista of the oöheca conveys air to a spongy process at the upper pole of the egg and so to a thin porous air-filled layer which lines the chorion. In Bombyx and Ephestia a thin porous inner layer of the chorion containing air communicates with the exterior through scattered pores containing air-filled spongy material. In the eggs of Diptera the chorion consists of tapering columns with spongy walls which unite the cement-covered outer layer to a spongy inner layer containing air. The horns on the Drosophila egg and the dorsal folds on the Calliphora egg provide respiratory outlets for this system. The spaces between the columns contain liquid in Calliphora and Drosophila; in Syrphus these spaces are greatly enlarged and contain air. The spongy layers may become filled with air in eggs which are still bathed in fluid in the oviduct, or in which water is present in adjacent parts of the shell. The mechanism of filling is discussed. In the case of Rhodnius there is quantitative evidence that the system will provide for the respiratory needs of the egg.


Viruses ◽  
2018 ◽  
Vol 10 (11) ◽  
pp. 579 ◽  
Author(s):  
Katri Eskelin ◽  
Minna Poranen

Viruses protect their genomes by enclosing them into protein capsids that sometimes contain lipid bilayers that either reside above or below the protein layer. Controlled dissociation of virions provides important information on virion composition, interactions, and stoichiometry of virion components, as well as their possible role in virus life cycles. Dissociation of viruses can be achieved by using various chemicals, enzymatic treatments, and incubation conditions. Asymmetrical flow field-flow fractionation (AF4) is a gentle method where the separation is based on size. Here, we applied AF4 for controlled dissociation of enveloped bacteriophage φ6. Our results indicate that AF4 can be used to assay the efficiency of the dissociation process and to purify functional subviral particles.


1946 ◽  
Vol s2-87 (348) ◽  
pp. 393-439
Author(s):  
J. W. BEAMENT

The main regions of the Ehodnius prolixus egg-shell have been defined; a concise definition has been obtained for the term ‘chorion’. The formation and structure of the unspecialized chorion has been followed from the time of differentiation of the follicle cells, up to the completion of the shell, and an assessment made of the chemistry and permeability of each component shell layer. The follicle cells are binucleate; changes in morphology and histology prior to secretion of the shell are outlined. The secretory products of the follicle cells fall naturally into an endochorion and an exochorion; the endochorion consists of five modifications of a proteinaceous substance. They are, in order of secretion: 1. The Inner Polyphenol Layer, which consists of a series of tanned granules of average diameter 2µ, containing large quantities of polyphenols. The layer is discontinuous and has no effect on permeability. 2. The Resistant Protein Layer, a tanned and possibly vulcanized layer of protein, 1 to 2µ, thick, containing diffuse polyphenols. It is resistant to strong acids and bases, and permeable to water, ions, and large water-soluble molecules. 3. The Outer Polyphenol Layer, which is similar to the inner layer, but has more minute granules. 4. The Amber Layer.--This is the only coloured layer of the shell, and is less than 0-1µthick. It consists of tanned protein to which oil is added after secretion. It is therefore a lipidized protein, which is excessively resistant to acids and alkalies, and permeable to oils and oil-soluble material and to small ions and water. 5. The Soft Protein Layer.--This is a thick laminated layer some 8µ. thick, similar to, but less resistant than, the resistant protein layer. It contains polyphenols and tyrosine. The layer is freely permeable to water-soluble substances. Throughout the secretion of the endochorion, the follicle cells stain deeply and appear to be filled with the protein components of the shell. The exochorion consists of two layers of the lipoprotein ‘chorionin’. 6. The Soft Exochorion Layer is a lipoprotein which is soluble in potash but not in strong acids; the layer is permeable to lipoid solvents and to water and small ions, but not to larger particles. It is 8µ thick at its maximum thickness, but contains follicular pits which, during secretion, are filled by long processes from the follicle cells. 7. The Eesistant Exochorion Layer is a more resistant form of chorionin. It lines the pits and covers the surface of the shell, giving rise to the polygonal markings corresponding to the follicle cells, each with a pit at its centre. The follicle cells contain quantities of lipoprotein during this phase of secretion, and are difficult to stain. A method of staining is described which shows that pore canals of two varieties are present in the exochorion layers only. They run from the walls of the pits but do not reach the endochorion. None of the layers of the chorion waterproofs the shell. In the rear end of the shell, the outer polyphenol layer is displaced towards the exochorion, thus increasing the resistant protein layer and reducing the soft protein layer. It is shown that all seven layers are present in the neck, and in the central region of the cap, and that the order of secretion is the same. Modifications are produced by variations in the thickness of the various layers. In the neck, the soft protein layer is reduced; in the cap, the resistant protein layer is reduced while the amber layer is 2µ thick, giving the cap a brown appearance. The soft protein layer is extremely thin and irregular while the exochorion layers are 16 µ thick. Pore canals are again present in two varieties. Some analysis is made of the formation of follicular pits; this appears to be correlated with the thickness of the exochorion and endochorion layers.


1971 ◽  
Vol 26 (5) ◽  
pp. 435-446 ◽  
Author(s):  
Alfons Radunz ◽  
Georg H. Schmid ◽  
Wilhelm Menke

Antibodies to chlorophyll are specifically adsorbed onto the membrane surface of thylakoids. The antibodies inhibit photosynthetic electron flow from water to NADP⊕. This inhibition is presumably caused by adsorption of the antibodies onto the centre chlorophyll of light reaction II. Fragments of the thylakoid membrane, obtained by ultrasonication and subsequent fractioning centrifugation, exhibit only photosystem-I activity. Conversely, the specific adsorption of antibodies to sensitizer chlorophyll has no inhibitory effect on electron transport. The ferricyanide Hill reaction of chloroplast preparations is inhibited by chlorophyll antibodies. From these observations it is concluded that the centre chlorophyll of light reaction II and at least part of the sensitizer chlorophyll is located on the surface of the thylakoids. As agglutination is sterically inhibited by the membrane protein, it is assumed that the chlorophyll is located in gaps or pores of the protein layer.Two fractions of the lamellar system exhibit photosystem I activity of different characteristic electron donor specificity. These fractions can be further distinguished in terms of their circular dichroism and protein composition.


1975 ◽  
Author(s):  
E. Nyilas ◽  
T.-H. Chiu ◽  
W. A. Morton ◽  
D. M. Lederman ◽  
G. A. Herzlinger ◽  
...  

To highlight the mechanisms of artificial surface/protein/platelet interactions, results obtained by various methods have been integrated to elucidate some of the correlations between phenomena which occur at the macromolecular level and subsequently influence those at the cellular level, such as platelet adhesion. Microcinematographic evidence obtained under the controlled conditions of the Stagnation Point Flow Experiment (SPFE) indicate that, even on glass, platelet adhesion commences only after 30-60 sees of exposure to native blood. This lag period is consistent with diffusion kinetics predicting the arrival of plasma proteins should overhwelmingly precede that of the cellular components. During the lag period, native plasma proteins collide with the artificial surface and, in most cases, adsorb with surface-induced conformational changes. The energy for altering the secondary protein structure is supplied by the heat of adsorption. The extent of adsorption and structural alterations depend upon both the type of protein and the molecular architecture of the artificial surface, viz., the number density and orientation of polar, H-bonding, etc. groups accessible to proteins. Using microparticulate glass (< μ dia.) and a microcalorimeter sensitive to ±0.00001° C in 100 ml of sample volume, serum albumin was found to adsorb, release heat, and desorb in a conformationally altered state. In contrast, γ-(7S)-globulin and fibrinogen underwent irreversible multilayer attachment releasing (1.0-1.7) χ 103 Kcal/mole of protein adsorbed directly to the glass surface. Proteins in the second, etc. sorbed layers released much smaller heats. The electrophoretic mobility of the same particles coated with varying amounts of the same proteins confirmed that the relatively greatest conformational change occurred in the protein layer directly attached to the artificial surface. On homologous Nylons exposed under identical hemodynamic conditions in the SPFE, the surface number density of platelets remaining adherent at points of identical shear was proportionate to the polar force contribution of those surfaces. These results indicate that the protein layer which settles first, is acting as a “proportional transformer” mediating the effects of artificial surfaces onto platelets.


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