Optimizing immunohistochemical staining for the HGF receptor c-MET in formalin-fixed paraffin-embedded archival human tissue

Author(s):  
B.A. Evans ◽  
K.C. Song ◽  
S.C. Strom ◽  
R. Zarnegar ◽  
R. Bahnson ◽  
...  

Frozen tissue immunohistochemistry is a useful technique employed in diagnostic and research investigations and is often used despite a loss of morphological detail. Formalin fixation yields much better tissue preservation, but may mask the antigen sites. We have optimized a technique that allows us to study the distribution of the HGF receptor, c-MET, in formalin fixed, paraffin embedded tissue using commercially available polyclonal antisera in which we unmasked antigens sites with protease digestion. The technique we use is detailed below.Sections are incubated in the following:1)4 μm paraffin sections are deparaffinized and hydrated2)0.03% protease (Type XXIV: Sigma) for 2 min at RT3)0.5% H2O2 in methanol for 30 min at RT4)Protein Blocking Agent (Lipshaw/Immunon) for 1 hr at RT5)1° antibody ( Santa Cruz Biotech, Santa Cruz, CA) for 2 hr at RTa.)c-MET (c-12) rabbit polyclonal IgG, 1:200 dilution in PBSb.)h-MET (c-28) rabbit polyclonal IgG, 1:100 dilution in PBSc.)m-MET (c-21) rabbit polyclonal IgG, 1:100 dilution in PBS

Author(s):  
G.G. Kovacs ◽  
J.L. Robinson ◽  
D.P. Perl ◽  
V.M.Y. Lee ◽  
J.Q. Trojanowski

Guam amyotrophic lateral sclerosis/parkinsonism-dementia complex is a progressive neurodegenerative disorder characterized by neuronal and glial tau pathologies. With the aim to evaluate aging-related tau astrogliopathy (ARTAG) we examined the collection at the University of Pennsylvania, consisting of blocks of the frontal parietal, temporal, and occipital cortices. Formalin fixed, paraffin-embedded tissue blocks were evaluated using anti-tau antibodies PHF-1 and AT8. In addition to neuronal and oligodendroglial tau pathology, granular/fuzzy astrocytes in the gray matter and thorn-shaped astrocytes (TSAs) in subpial location were also observed. Twenty-one out of 33 cases (63%) showed subpial TSAs diffusely along the cortical surface in one or more cortical regions. Accumulation of TSAs in the depth of the sulci were seen in 41% in the temporal, 7% in the frontal and 14% in parietal cortex. This was not associated with perivascular neuronal tau pathology in the depth of the sulci. Accumulation of TSAs in the depth of cortical sulci in this cohort is approximately 20 times more frequent than reported in a European aging cohort. The presence of subpial TSAs in the depth of cortical sulci in CTE and Guam PDC, and less frequently in aging brains, might suggest common mechanisms.Learning ObjectivesDescribe the spectrum of neuropathology in Guam ALS/PDCDescribe the frequency of tau positive cortical subpial thorn-shaped astrocytes


2014 ◽  
Vol 14 (3) ◽  
pp. 382-387 ◽  
Author(s):  
Juliana Fischer ◽  
Nathalie Canedo ◽  
Katia Goncalves ◽  
Leila Chimelli ◽  
Monique Franca ◽  
...  

Biomedicines ◽  
2021 ◽  
Vol 9 (2) ◽  
pp. 179
Author(s):  
Kristian Urh ◽  
Margareta Žlajpah ◽  
Nina Zidar ◽  
Emanuela Boštjančič

Significant progress has been made in the last decade in our understanding of the pathogenetic mechanisms of colorectal cancer (CRC). Cancer stem cells (CSC) have gained much attention and are now believed to play a crucial role in the pathogenesis of various cancers, including CRC. In the current study, we validated gene expression of four genes related to CSC, L1TD1, SLITRK6, ST6GALNAC1 and TCEA3, identified in a previous bioinformatics analysis. Using bioinformatics, potential miRNA-target gene correlations were prioritized. In total, 70 formalin-fixed paraffin-embedded biopsy samples from 47 patients with adenoma, adenoma with early carcinoma and CRC without and with lymph node metastases were included. The expression of selected genes and microRNAs (miRNAs) was evaluated using quantitative PCR. Differential expression of all investigated genes and four of six prioritized miRNAs (hsa-miR-199a-3p, hsa-miR-335-5p, hsa-miR-425-5p, hsa-miR-1225-3p, hsa-miR-1233-3p and hsa-miR-1303) was found in at least one group of CRC cancerogenesis. L1TD1, SLITRK6, miR-1233-3p and miR-1225-3p were correlated to the level of malignancy. A negative correlation between miR-199a-3p and its predicted target SLITRK6 was observed, showing potential for further experimental validation in CRC. Our results provide further evidence that CSC-related genes and their regulatory miRNAs are involved in CRC development and progression and suggest that some them, particularly miR-199a-3p and its SLITRK6 target gene, are promising for further validation in CRC.


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