Femtosecond Time-Resolved Absorption Study of Signaling State of a BLUF Protein PixD from the Cyanobacterium Synechocystis: Hydrogen-Bond Rearrangement Completes during Forward Proton-Coupled Electron Transfer

Author(s):  
Tomotsumi Fujisawa ◽  
Shinji Masuda ◽  
Satoshi Takeuchi ◽  
Tahei Tahara
2020 ◽  
Vol 11 (24) ◽  
pp. 6268-6274
Author(s):  
Alexander M. Brugh ◽  
Malcolm D. E. Forbes

Time-resolved electron paramagnetic resonance (TREPR) spectroscopy has been used to study the proton coupled electron transfer (PCET) reaction between a Ruthenium complex (Ru(bpz)(bpy)2) and several substituted hydroquinones (HQ).


2013 ◽  
Vol 91 (2) ◽  
pp. 155-168
Author(s):  
Waled Tantawy ◽  
Ahmed Hashem ◽  
Nabil Yousif ◽  
Eman Flefel

The thermochemistry of the hydrogen atom transfer reactions from the H2O–BX2 radical system (X = H, CH3, NH2, OH, F) to carbon dioxide, formic acid, and (or) formaldehyde, which produce hydroxyformyl, dihydroxymethyl, and hydroxymethyl radicals, respectively, were investigated theoretically at ROMP2/6–311+G(3DF,2P)//UB3LYP/6–31G(D) and UG3(MP2)-RAD levels of theory. Surprisingly, in the cases of a strong Lewis acid (X = H, CH3, F), the spin transfer process from the water–boryl radical to the carbonyl compounds was barrier-free and associated with a dramatic reduction in the B–H bond dissociation energy (BDE) relative to that of isolated water–borane complexes. Examining the coordinates of these reactions revealed that the entire hydrogen atom transfer process is governed by the proton-coupled electron transfer (PCET) mechanism. Hence, the elucidated mechanism has been applied in the cases of weak Lewis acids (X = NH2, OH), and the variation in the accompanied activation energy was attributed to the stereoelectronic effect interplaying in CO2 and HCOOH compared with HCHO. We ascribed the overall mechanism as a SA-induced five-center cyclic PCET, in which the proton transfers across the so-called complexation-induced hydrogen bond (CIHB) channel, while the SOMOB–LUMOC=O′ interaction is responsible for the electron migration process. Owing to previous reports that interrelate the hydrogen-bonding and the rate of proton-coupled electron-transfer reactions, we postulated that “the rate of the PCET reaction is expected to be promoted by the covalency of the hydrogen bond, and any factor that enhances this covalency could be considered an activator of the PCET process.” This postulate could be considered a good rationale for the lack of a barrier associated with the hydrogen atom transfer from the water-boryl radical system to the carbonyl compounds. Light has been shed on the water–boryl radical reagent from the thermodynamic perspective.


2012 ◽  
Vol 3 (2) ◽  
pp. 203-208 ◽  
Author(s):  
Tilo Mathes ◽  
Jingyi Zhu ◽  
Ivo H. M. van Stokkum ◽  
M. L. Groot ◽  
Peter Hegemann ◽  
...  

2018 ◽  
Vol 20 (32) ◽  
pp. 21127-21135 ◽  
Author(s):  
Olga B. Morozova ◽  
Mikhail S. Panov ◽  
Natalya N. Fishman ◽  
Alexandra V. Yurkovskaya

We use proportionality between NMR signal enhancements in geminate products and hyperfine coupling constants in transient radicals to elucidate reaction mechanism in detail.


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