Dynamic diel proteome and daytime nitrogenase activity supports buoyancy in the cyanobacterium Trichodesmium

Author(s):  
Noelle A. Held ◽  
John B. Waterbury ◽  
Eric A. Webb ◽  
Riss M. Kellogg ◽  
Matthew R. McIlvin ◽  
...  
Keyword(s):  
Forests ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 120
Author(s):  
Guangyu Zhao ◽  
Yihui Wei ◽  
Jiaqi Chen ◽  
Yuhong Dong ◽  
Lingyu Hou ◽  
...  

Purpose: This research was aimed to screen and identify multifunctional phosphorus-dissolving bacteria of a Chinese fir (Cunninghamia lanceolata) plantation and study its phosphorus-dissolving characteristics in order to provide strain resources and a theoretical basis for developing the appropriate bacterial fertilizer of a Chinese fir plantation. Methods: First, phosphorus-dissolving bacteria were isolated from the woodland soil of a Chinese fir plantation by Pikovskava inorganic phosphorus medium (PVK). Then, some growth-promoting indicators of primary screening strains were determined, including the capacity of phosphorus-solubilized, nitrogenase activity, 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity, production of indole-3-acetic acid (IAA), secretion of iron carrier and so on. Finally, the screening multifunctional phosphorus-dissolving bacteria were identified, which were combined with colony characteristics, physiological and biochemical tests and molecular biotechnology. Results: (1) Thirteen phosphorus-dissolving bacteria were isolated and screened in total, and P5 (195.61 mg·L−1) had the strongest capacity of phosphorus-solubilized. Five phosphorus-dissolving bacteria were provided with nitrogenase activity, and the highest activity of nitrogenase was P10 and P5 (71.90 C2H4 nmol·mL−1·h−1 and 71.00 C2H4 nmol·mL−1·h−1, respectively). Four strains were provided with ACC deaminase activity, and the highest activity of ACC deaminase was P5 and P9, (0.74 μmol·mg−1·h−1 and 0.54 μmol·mg−1·h−1, respectively). Most strains could secrete IAA, and three strains of bacteria had a strong secretory ability, which could secrete IAA with a concentration greater than 15 mg·mL−1, and P5 was 18.00, P2 was 17.30, P6 was 15.59 (mg·mL−1). P5 produced carriers of iron better than others, and the ratio of the diameter of the iron production carrier ring to the diameter of the colony was 1.80, respectively, which was significantly higher than other strains. Combining all kinds of factors, P5 multifunctional phosphorus-dissolving bacteria were screened for eventual further study. (2) Strain P5 was identified as Burkholderia ubonensis, based on the colony characteristics, physiological and biochemical tests, 16SrDNA sequence analysis and phylogenetic tree construction. Conclusion: P5 has a variety of high-efficiency growth-promoting capabilities, and the ability to produce IAA, ACC deaminase activity and siderophore performance are significantly higher than other strains, which had great potential in the development of microbial fertilizer.


Horticulturae ◽  
2021 ◽  
Vol 7 (8) ◽  
pp. 205
Author(s):  
Ihab M. Farid ◽  
Mohamed A. El-Ghozoli ◽  
Mohamed H. H. Abbas ◽  
Dalia S. El-Atrony ◽  
Hassan H. Abbas ◽  
...  

Organic amendments are important sources of nutrients that release upon organic matter degradation, yet the stability of these organics in arid and semi-arid regions is relatively low. In contrast, humic substances (HS) are resistant to biodegradation and can keep nutrients in the soil available for the plant over a long time. Combinations between humic substances (HS) and mineral-N fertilizers are assumed to retain higher available nutrients in soils than those recorded for the sole application of either mineral or organic applications. We anticipate, however, that humic substances might not be as efficient as the organics from which they were extracted in increasing NP uptake by plants. To test these assumptions, faba bean was planted in a pot experiment under greenhouse conditions following a complete randomized design while considering three factors: two soils (calcareous and non-calcareous, Factor A), two organics (biogas and compost, Factor B) and combinations of the organics and their extracts (HA or FA) together with complementary doses of mineral-N ((NH4)2SO4) to attain a total rate of 50 kg N ha−1 (the recommended dose for faba bean plants) (Factor C). Results indicated that nitrogenase activity increased significantly due to the application of the used organics. In this respect, compost manure caused higher nitrogenase activity than biogas manure did. Humic substances raised NP-availability and the uptake by plants significantly; however, the values of increase were lower than those that occurred due to the compost or biogas manure. Moreover, the sole application of the used organics recorded the highest increases in plant biomass. Significant correlations were also detected between NP-availability, uptake and plant biomass. This means that HS could probably retain nutrients in available forms for long time periods, yet nutrients released continuously but slowly upon decomposition of organics seemed more important for plant nutrition.


Cells ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 952
Author(s):  
Paula Bellés-Sancho ◽  
Martina Lardi ◽  
Yilei Liu ◽  
Sebastian Hug ◽  
Marta Adriana Pinto-Carbó ◽  
...  

Homocitrate is an essential component of the iron-molybdenum cofactor of nitrogenase, the bacterial enzyme that catalyzes the reduction of dinitrogen (N2) to ammonia. In nitrogen-fixing and nodulating alpha-rhizobia, homocitrate is usually provided to bacteroids in root nodules by their plant host. In contrast, non-nodulating free-living diazotrophs encode the homocitrate synthase (NifV) and reduce N2 in nitrogen-limiting free-living conditions. Paraburkholderia phymatum STM815 is a beta-rhizobial strain, which can enter symbiosis with a broad range of legumes, including papilionoids and mimosoids. In contrast to most alpha-rhizobia, which lack nifV, P. phymatum harbors a copy of nifV on its symbiotic plasmid. We show here that P. phymatum nifV is essential for nitrogenase activity both in root nodules of papilionoid plants and in free-living growth conditions. Notably, nifV was dispensable in nodules of Mimosa pudica despite the fact that the gene was highly expressed during symbiosis with all tested papilionoid and mimosoid plants. A metabolome analysis of papilionoid and mimosoid root nodules infected with the P. phymatum wild-type strain revealed that among the approximately 400 measured metabolites, homocitrate and other metabolites involved in lysine biosynthesis and degradation have accumulated in all plant nodules compared to uninfected roots, suggesting an important role of these metabolites during symbiosis.


1983 ◽  
Vol 101 (2) ◽  
pp. 377-381 ◽  
Author(s):  
R. Rai ◽  
V. Prasad

SUMMARYRhizobium strains adapted to high temperature, and genotypes of green gram, were used to study the symbiotic N2-fixation in a summer season at two moisture levels in calcareous soil. Different interactions between strains and genotypes were observedatthe two moisture levels. At both moisture levels, strain S4 with the green gram genotype S8 showed the greatest grain yield, nitrogenase activity, leghaemoglobin and ethanolsoluble carbohydrate of nodules.


2006 ◽  
Vol 22 (6) ◽  
pp. 571-576 ◽  
Author(s):  
Neda Soltani ◽  
Ramezan Ali Khavari-Nejad ◽  
Mojtaba Tabatabaei Yazdi ◽  
Shadman Shokravi ◽  
Eduardo Fernández-Valiente

1989 ◽  
Vol 55 (5) ◽  
pp. 853-857 ◽  
Author(s):  
Wung Yang Shieh ◽  
Usio Simidu ◽  
Yoshiharu Maruyama

1987 ◽  
Vol 40 (1) ◽  
pp. 119-122 ◽  
Author(s):  
David W. Spence ◽  
William D.P. Stewart
Keyword(s):  

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