scholarly journals Exploring cyclic networks of multisite modification reveals origins of information processing characteristics

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Thapanar Suwanmajo ◽  
Vaidhiswaran Ramesh ◽  
J. Krishnan

Abstract Multisite phosphorylation (and generally multisite modification) is a basic way of encoding substrate function and circuits/networks of post-translational modifications (PTM) are ubiquitous in cell signalling. The information processing characteristics of PTM systems are a focal point of broad interest. The ordering of modifications is a key aspect of multisite modification, and a broad synthesis of the impact of ordering of modifications is still missing. We focus on a basic class of multisite modification circuits: the cyclic mechanism, which corresponds to the same ordering of phosphorylation and dephosphorylation, and examine multiple variants involving common/separate kinases and common/separate phosphatases. This is of interest both because it is encountered in concrete cellular contexts, and because it serves as a bridge between ordered (sequential) mechanisms (representing one type of ordering) and random mechanisms (which have no ordering). We show that bistability and biphasic dose response curves of the maximally modified phosphoform are ruled out for basic structural reasons independent of parameters, while oscillations can result with even just one shared enzyme. We then examine the effect of relaxing some basic assumptions about the ordering of modification. We show computationally and analytically how bistability, biphasic responses and oscillations can be generated by minimal augmentations to the cyclic mechanism even when these augmentations involved reactions operating in the unsaturated limit. All in all, using this approach we demonstrate (1) how the cyclic mechanism (with single augmentations) represents a modification circuit using minimal ingredients (in terms of shared enzymes and sequestration of enzymes) to generate bistability and oscillations, when compared to other mechanisms, (2) new design principles for rationally designing PTM systems for a variety of behaviour, (3) a basis and a necessary step for understanding the origins and robustness of behaviour observed in basic multisite modification systems.

2019 ◽  
pp. 27-35
Author(s):  
Alexandr Neznamov

Digital technologies are no longer the future but are the present of civil proceedings. That is why any research in this direction seems to be relevant. At the same time, some of the fundamental problems remain unattended by the scientific community. One of these problems is the problem of classification of digital technologies in civil proceedings. On the basis of instrumental and genetic approaches to the understanding of digital technologies, it is concluded that their most significant feature is the ability to mediate the interaction of participants in legal proceedings with information; their differentiating feature is the function performed by a particular technology in the interaction with information. On this basis, it is proposed to distinguish the following groups of digital technologies in civil proceedings: a) technologies of recording, storing and displaying (reproducing) information, b) technologies of transferring information, c) technologies of processing information. A brief description is given to each of the groups. Presented classification could serve as a basis for a more systematic discussion of the impact of digital technologies on the essence of civil proceedings. Particularly, it is pointed out that issues of recording, storing, reproducing and transferring information are traditionally more «technological» for civil process, while issues of information processing are more conceptual.


2021 ◽  
pp. 014616722110132
Author(s):  
Konrad Bocian ◽  
Wieslaw Baryla ◽  
Bogdan Wojciszke

Previous research found evidence for a liking bias in moral character judgments because judgments of liked people are higher than those of disliked or neutral ones. This article sought conditions moderating this effect. In Study 1 ( N = 792), the impact of the liking bias on moral character judgments was strongly attenuated when participants were educated that attitudes bias moral judgments. In Study 2 ( N = 376), the influence of liking on moral character attributions was eliminated when participants were accountable for the justification of their moral judgments. Overall, these results suggest that although liking biases moral character attributions, this bias might be reduced or eliminated when deeper information processing is required to generate judgments of others’ moral character.


Author(s):  
Robert F Engle ◽  
Martin Klint Hansen ◽  
Ahmet K Karagozoglu ◽  
Asger Lunde

Abstract Motivated by the recent availability of extensive electronic news databases and advent of new empirical methods, there has been renewed interest in investigating the impact of financial news on market outcomes for individual stocks. We develop the information processing hypothesis of return volatility to investigate the relation between firm-specific news and volatility. We propose a novel dynamic econometric specification and test it using time series regressions employing a machine learning model selection procedure. Our empirical results are based on a comprehensive dataset comprised of more than 3 million news items for a sample of 28 large U.S. companies. Our proposed econometric specification for firm-specific return volatility is a simple mixture model with two components: public information and private processing of public information. The public information processing component is defined by the contemporaneous relation with public information and volatility, while the private processing of public information component is specified as a general autoregressive process corresponding to the sequential price discovery mechanism of investors as additional information, previously not publicly available, is generated and incorporated into prices. Our results show that changes in return volatility are related to public information arrival and that including indicators of public information arrival explains on average 26% (9–65%) of changes in firm-specific return volatility.


Author(s):  
Keisuke Kokubun ◽  
Yoshinori Yamakawa

The coronavirus disease (COVID-19) continues to spread globally. While social distancing has attracted attention as a measure to prevent the spread of infection, some occupations find it difficult to implement. Therefore, this study aims to investigate the relationship between work characteristics and social distancing using data available on O*NET, an occupational information site. A total of eight factors were extracted by performing an exploratory factor analysis: work conditions, supervisory work, information processing, response to aggression, specialization, autonomy, interaction outside the organization, and interdependence. A multiple regression analysis showed that interdependence, response to aggression, and interaction outside the organization, which are categorized as ”social characteristics,” and information processing and specialization, which are categorized as “knowledge characteristics,” were associated with physical proximity. Furthermore, we added customer, which represents contact with the customer, and remote working, which represents a small amount of outdoor activity, to our multiple regression model, and confirmed that they increased the explanatory power of the model. This suggests that those who work under interdependence, face aggression, and engage in outside activities, and/or have frequent contact with customers, little interaction outside the organization, and little information processing will have the most difficulty in maintaining social distancing.


2021 ◽  
Author(s):  
Steluta topalov

<p>On 4 august 2020, one of the biggest non-nuclear explosions the world has seen in recent times took place in the Port of Beirut. Caused by the detonation of 2,750 tons of ammonium nitrate, inadequate stored in a warehouse in the port, the blast destroyed much of the city’s port and the surrounding infrastructure and severly  damaged the dense residential and commercial areas within 5 km of the explosion site. The impact of the explosion, which registered as a 3.3 magnitude earthquake according to the U.S. Geological Survey, was felt as far away as the island of Cyprus.</p><p>Athough the event was an technological hazard, the impact of the explosion is similar to a standardised natural disaster.</p><p>According to UNDP, a total of 200 000 residential units were affected with an estimated of 40 000 buildings damaged; 200 people lost their lives, around 6 000 individuals were injuried and around 300 000 people were displaced.</p><p>Such figure are comparable to other large-scale disasters such as Cyclone Vayu in India, which occured in June 2019 or the displacement caused by the Typhoon Vongfong, in the Philippines.</p><p>The frequent increase of the natural disasters  puts pressure on the critical infrastructure of the cities. The disruption of the transportation system,  which is vital for the sustainable daily operations, are having a big impact on the economical, enviromental and social dimension of a city system. Among the various types of transportation system, ports are a focal point because of its strategic role for the economic growth of cities,regions and  global network. In addition, they are nodal points for the social and economical activity of the inhabitants.</p><p>Although the ports have played a key role in the development of their host cities, they are also vulnerable to a broad range of risks and threats because of a particular spatial character: the location at the intersection of land and sea.  </p><p>The study of the Beirut’s Port explosion examines the impact of port failures on the host urban enviroment and the relationship between hazards, vulnerability and the impact. The vulnerability of the port to disasters results  to the vulnerability of its host city. A context –based understanding  of the impact of the disaster and the elements at risk is essential to identify appropriate risk management strategies. The location of the port within the urban environment, in densely populated area, as in case of Beirut are some of the characteristics of the port cities that can magnify the impact of disasters to which they are prone.  The study will focus on a collection of data that records the impact and allows visualisation of the complex patterns of the disaster risk reduction.</p><p>The impact caused by the Beirut’s port explosion reminds us about the important role of the ports in their host cities and how fundamental is to identify the port’s infrastructure  exposure to hazards and risks.  Lessons learned from such event may be useful to reduce disaster risks in the port cities.</p>


2006 ◽  
Vol 34 (3) ◽  
pp. 319-331 ◽  
Author(s):  
Nicole Buck ◽  
Merel Kindt ◽  
Marcel van den Hout

Dissociation often occurs after a traumatic experience and has detrimental effects on memory. If these supposed detrimental effects are the result of disturbances in information processing, not only subjectively assessed but also objectively assessed memory disturbances should be observed. Most studies assessing dissociation and memory in the context of trauma have studied trauma victims. However, this study takes a new approach in that the impact of experimentally induced state dissociation on memory is investigated in people with spider phobia. Note that the aim of the present study was not to test the effect of trauma on memory disturbances. We found indeed significant relations between state dissociation and subjectively assessed memory disturbances: intrusions and self-rated memory fragmentation. Moreover, although no relation was found between state dissociation and experimenter-rated memory fragmentation, we observed a relation between state dissociation and experimenter-rated perceptual memory representations. These results show that state dissociation indeed has detrimental effects on the processing of aversive events.


Soil Research ◽  
2017 ◽  
Vol 55 (4) ◽  
pp. 341 ◽  
Author(s):  
Craig A. Scanlan ◽  
Ross F. Brennan ◽  
Mario F. D'Antuono ◽  
Gavin A. Sarre

Interactions between soil pH and phosphorus (P) for plant growth have been widely reported; however, most studies have been based on pasture species, and the agronomic importance of this interaction for acid-tolerant wheat in soils with near-sufficient levels of fertility is unclear. We conducted field experiments with wheat at two sites with acid soils where lime treatments that had been applied in the 6 years preceding the experiments caused significant changes to soil pH, extractable aluminium (Al), soil nutrients and exchangeable cations. Soil pH(CaCl2) at 0–10cm was 4.7 without lime and 6.2 with lime at Merredin, and 4.7 without lime and 6.5 with lime at Wongan Hills. A significant lime×P interaction (P<0.05) for grain yield was observed at both sites. At Merredin, this interaction was negative, i.e. the combined effect of soil pH and P was less than their additive effect; the difference between the dose–response curves without lime and with lime was greatest at 0kgPha–1 and the curves converged at 32kgPha–1. At Wongan Hills, the interaction was positive (combined effect greater than the additive effect), and lime application reduced grain yield. The lime×P interactions observed are agronomically important because different fertiliser P levels were required to maximise grain yield. A lime-induced reduction in Al phytotoxicity was the dominant mechanism for this interaction at Merredin. The negative grain yield response to lime at Wongan Hills was attributed to a combination of marginal soil potassium (K) supply and lime-induced reduction in soil K availability.


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