scholarly journals Artificial intelligence based automatic quantification of epicardial adipose tissue suitable for large scale population studies

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
David Molnar ◽  
Olof Enqvist ◽  
Johannes Ulén ◽  
Måns Larsson ◽  
John Brandberg ◽  
...  

AbstractTo develop a fully automatic model capable of reliably quantifying epicardial adipose tissue (EAT) volumes and attenuation in large scale population studies to investigate their relation to markers of cardiometabolic risk. Non-contrast cardiac CT images from the SCAPIS study were used to train and test a convolutional neural network based model to quantify EAT by: segmenting the pericardium, suppressing noise-induced artifacts in the heart chambers, and, if image sets were incomplete, imputing missing EAT volumes. The model achieved a mean Dice coefficient of 0.90 when tested against expert manual segmentations on 25 image sets. Tested on 1400 image sets, the model successfully segmented 99.4% of the cases. Automatic imputation of missing EAT volumes had an error of less than 3.1% with up to 20% of the slices in image sets missing. The most important predictors of EAT volumes were weight and waist, while EAT attenuation was predicted mainly by EAT volume. A model with excellent performance, capable of fully automatic handling of the most common challenges in large scale EAT quantification has been developed. In studies of the importance of EAT in disease development, the strong co-variation with anthropometric measures needs to be carefully considered.

1997 ◽  
Vol 43 (8) ◽  
pp. 1321-1324 ◽  
Author(s):  
Gianluca De Bellis ◽  
Giuliana Salani ◽  
Silvia Panigone ◽  
Ferruccio Betti ◽  
Luigia Invernizzi ◽  
...  

Abstract We present the genotyping of apolipoprotein (apo) E by means of restriction fragment analysis of amplified genomic DNA by high-performance capillary electrophoresis and a replaceable non-gel-sieving matrix. This procedure streamlines the genotyping of apo E in large-scale population studies because of the automation and speed of capillary electrophoresis.


2020 ◽  
Author(s):  
Lingyu Xu ◽  
Yuancheng Xu ◽  
Stanislau Hrybouski ◽  
D Ian Paterson ◽  
Richard B. Thompson ◽  
...  

ABSTRACTBackgroundThis study investigated accuracy and consistency of epicardial adipose tissue (EAT) quantification in chest computed tomography (CT) scans.Methods and resultsEAT volume was quantified semi-automatically using a standard Hounsfield unit threshold (-190U, -30) in three independent cohorts: (1) Cohort 1 (N = 30) consisted of paired 120 KV cardiac non-contrast CT (NCCT) and 120 KV chest NCCT; (2) Cohort 2 (N = 20) consisted of paired 120 KV cardiac NCCT and 100 KV chest NCCT; (3) Cohort 3 (N = 20) consisted of paired chest NCCT and chest contrast-enhanced CT (CECT) datasets. Images were reconstructed with the slice thicknesses of 1.25 mm and 5 mm in the chest CT datasets, and 3 mm in the cardiac NCCT datasets. In Cohort 1, the chest NCCT-1.25 mm EAT volume was similar to the cardiac NCCT EAT volume, whilst chest NCCT-5 mm underestimated the EAT volume by 7.0%. In Cohort 2, 100 KV chest NCCT-1.25mm and -5 mm EAT volumes were 9.7% and 6.4% larger than corresponding 120 KV cardiac NCCT EAT volumes. In Cohort 3, the chest CECT dataset underestimated EAT volumes by ∼25%, relative to chest NCCT datasets. All chest CT-derived EAT volumes were strongly correlated with their cardiac CT counterparts.ConclusionsThe chest NCCT-1.25 mm EAT volume with the 120 KV tube energy produced EAT volumes that are comparable to cardiac NCCT. All chest CT EAT volumes were strongly correlated with EAT volumes obtained from cardiac CT, if imaging protocol is consistently applied to all participants.


2019 ◽  
Vol 121 ◽  
pp. 108732 ◽  
Author(s):  
Mohamed Marwan ◽  
Susanna Koenig ◽  
Kirsten Schreiber ◽  
Fabian Ammon ◽  
Markus Goeller ◽  
...  

2020 ◽  
Vol 98 (1) ◽  
pp. 13-20
Author(s):  
A. Marozzi ◽  
V.I. Cantarelli ◽  
F.M. Gomez ◽  
A. Panebianco ◽  
L.R. Leggieri ◽  
...  

Pregnancy status is usually not included in ecological studies because it is difficult to evaluate. The use of non-invasive methods to determine pregnancy, without physically restraining individuals, would enable pregnancy to be included in population studies. In this study, we evaluated sex steroid hormones in plasma and fecal samples from pregnant and non-pregnant females to develop a pregnancy predictive model for guanacos (Lama guanicoe (Müller, 1776)). Samples were obtained during live-shearing management (i.e., capture, shear, and release) of guanacos. Enzyme immunoassays were used to evaluate progesterone (P4) and estradiol (E2) concentrations in plasma and pregnanediol glucuronides (PdG) and conjugated estrogens (EC) in feces. Mean hormonal and fecal metabolite concentrations were significantly higher in pregnant females than in non-pregnant females. A linear relationship was found between each hormone and its fecal metabolite. Finally, hormonal data were combined with an independent source of pregnancy diagnosis such as abdominal ballottement to develop a logistic regression model to diagnose pregnancy in non-handled individuals. The use of predictive models and non-invasive methods might be suitable to incorporate pregnancy information in large-scale population studies on guanaco and other free-ranging ungulates.


2013 ◽  
Vol 65 (9) ◽  
pp. 1410-1415 ◽  
Author(s):  
Michelle J. Ormseth ◽  
Aliza Lipson ◽  
Nikolaos Alexopoulos ◽  
Gregory R. Hartlage ◽  
Annette M. Oeser ◽  
...  

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